RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 GPR183P32249 361 aa16.65■□□□□ 0.26
SOX4-201ENST00000244745 FNDC4Q9H6D8 234 aaPredicted RBP16.65■□□□□ 0.26
SOX4-201ENST00000244745 CASP8AP2Q9UKL3 1982 aa16.65■□□□□ 0.26
SOX4-201ENST00000244745 IGKV1-12A0A0C4DH73 117 aa16.65■□□□□ 0.26
SOX4-201ENST00000244745 IGKV1D-12P01611 117 aa16.65■□□□□ 0.26
SOX4-201ENST00000244745 HIST1H1AQ02539 215 aaPredicted RBP16.65■□□□□ 0.26
SOX4-201ENST00000244745 SAPCD1Q5SSQ6 148 aa16.65■□□□□ 0.26
SOX4-201ENST00000244745 TMEM242Q9NWH2 141 aa16.65■□□□□ 0.26
SOX4-201ENST00000244745 LURAP1LQ8IV03 231 aa16.64■□□□□ 0.25
SOX4-201ENST00000244745 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.64■□□□□ 0.25
SOX4-201ENST00000244745 LTBRP36941 435 aa16.64■□□□□ 0.25
SOX4-201ENST00000244745 TRAV8-6A0A0B4J262 113 aa16.64■□□□□ 0.25
SOX4-201ENST00000244745 KBTBD11-OT1A0A1B0GTJ5 212 aa16.64■□□□□ 0.25
SOX4-201ENST00000244745 CA1P00915 261 aaPredicted RBP16.64■□□□□ 0.25
SOX4-201ENST00000244745 ATP5IP56385 69 aaPredicted RBP16.64■□□□□ 0.25
SOX4-201ENST00000244745 RNF144BQ7Z419 303 aa16.64■□□□□ 0.25
SOX4-201ENST00000244745 RPP21Q9H633 154 aaKnown RBP16.64■□□□□ 0.25
SOX4-201ENST00000244745 PRDM6Q9NQX0 595 aa16.64■□□□□ 0.25
SOX4-201ENST00000244745 DLEU1O43261 78 aa16.64■□□□□ 0.25
SOX4-201ENST00000244745 NBEAP1P0C6P0 100 aa16.64■□□□□ 0.25
SOX4-201ENST00000244745 LHFPL1Q86WI0 220 aa16.64■□□□□ 0.25
SOX4-201ENST00000244745 MRPL20Q9BYC9 149 aaKnown RBP16.64■□□□□ 0.25
SOX4-201ENST00000244745 A0A1B0GW64 132 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 PGPEP1LA6NFU8 196 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 TNFSF13O75888 250 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 ADIPOQQ15848 244 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 LRTM2Q8N967 370 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 PRELID3AQ96N28 172 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 TRBV24-1A0A075B6N3 115 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 IGHV3-35A0A0C4DH35 117 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 ID3Q02535 119 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 FAM53AQ6NSI3 398 aaPredicted RBP16.63■□□□□ 0.25
SOX4-201ENST00000244745 GP6Q9HCN6 339 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 NPIPB11E5RHQ5 1161 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 PF4V1P10720 104 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 RNFT1Q5M7Z0 435 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 DYNLRB2Q8TF09 96 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 GDF15Q99988 308 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 MRPL16Q9NX20 251 aaKnown RBP16.63■□□□□ 0.25
SOX4-201ENST00000244745 PHLDA3Q9Y5J5 127 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 TRAV9-2A0A087WT02 112 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 FOXI3A8MTJ6 420 aaPredicted RBP16.63■□□□□ 0.25
SOX4-201ENST00000244745 LDLRAD2Q5SZI1 272 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 OSR1Q8TAX0 266 aaPredicted RBP16.63■□□□□ 0.25
SOX4-201ENST00000244745 RLFQ13129 1914 aa16.63■□□□□ 0.25
SOX4-201ENST00000244745 A0A1B0GWB2 263 aa16.62■□□□□ 0.25
SOX4-201ENST00000244745 LINC00271P0C7V0 271 aa16.62■□□□□ 0.25
SOX4-201ENST00000244745 CEACAM1P13688 526 aa16.62■□□□□ 0.25
SOX4-201ENST00000244745 FGF11Q92914 225 aa16.62■□□□□ 0.25
SOX4-201ENST00000244745 MRPS18CQ9Y3D5 142 aaKnown RBP16.62■□□□□ 0.25
SOX4-201ENST00000244745 IGKV1-27A0A075B6S5 117 aa16.62■□□□□ 0.25
SOX4-201ENST00000244745 DEPPQ9NTK1 212 aa16.62■□□□□ 0.25
SOX4-201ENST00000244745 GLRXP35754 106 aa16.62■□□□□ 0.25
SOX4-201ENST00000244745 ARTNQ5T4W7 220 aa16.62■□□□□ 0.25
SOX4-201ENST00000244745 SSBP4Q9BWG4 385 aaPredicted RBP16.62■□□□□ 0.25
SOX4-201ENST00000244745 CRYGSP22914 178 aa16.62■□□□□ 0.25
SOX4-201ENST00000244745 FAM27E3Q08E93 113 aa16.62■□□□□ 0.25
SOX4-201ENST00000244745 OR10J3Q5JRS4 329 aa16.62■□□□□ 0.25
SOX4-201ENST00000244745 RFNGQ9Y644 331 aa16.62■□□□□ 0.25
SOX4-201ENST00000244745 SAA2-SAA4A0A096LPE2 208 aa16.62■□□□□ 0.25
SOX4-201ENST00000244745 PINLYPA6NC86 204 aa16.62■□□□□ 0.25
SOX4-201ENST00000244745 SAA2P0DJI9 122 aaPredicted RBP16.62■□□□□ 0.25
SOX4-201ENST00000244745 DLX6P56179 175 aa16.62■□□□□ 0.25
SOX4-201ENST00000244745 LOC105371242A0A075B767 164 aa16.61■□□□□ 0.25
SOX4-201ENST00000244745 MUC21A0A0G2JKD1 596 aa16.61■□□□□ 0.25
SOX4-201ENST00000244745 MUC21A0A140T8X8 626 aa16.61■□□□□ 0.25
SOX4-201ENST00000244745 SS18L1O75177 396 aaPredicted RBP16.61■□□□□ 0.25
SOX4-201ENST00000244745 MUC21Q5SSG8 566 aa16.61■□□□□ 0.25
SOX4-201ENST00000244745 C2orf88Q9BSF0 95 aa16.61■□□□□ 0.25
SOX4-201ENST00000244745 TIMM23BQ5SRD1 257 aa16.61■□□□□ 0.25
SOX4-201ENST00000244745 CFHR1Q03591 330 aa16.61■□□□□ 0.25
SOX4-201ENST00000244745 C1orf194Q5T5A4 169 aa16.61■□□□□ 0.25
SOX4-201ENST00000244745 TEX45Q8NA69 505 aa16.61■□□□□ 0.25
SOX4-201ENST00000244745 FMC1Q96HJ9 113 aa16.61■□□□□ 0.25
SOX4-201ENST00000244745 C5orf63A6NC05 138 aa16.61■□□□□ 0.25
SOX4-201ENST00000244745 GCSAMLQ5JQS6 135 aa16.61■□□□□ 0.25
SOX4-201ENST00000244745 EBLN2Q6P2I7 272 aa16.61■□□□□ 0.25
SOX4-201ENST00000244745 TM4SF5O14894 197 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 GNG5P63218 68 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 SYT8Q8NBV8 401 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 NABP1Q96AH0 204 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 RNF115Q9Y4L5 304 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 IGKV3D-15A0A087WSY6 115 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 HIGD1CA8MV81 97 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 IGKV3-15P01624 115 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 OR52E5Q8NH55 327 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 TMEM171Q8WVE6 324 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 SLX1AQ9BQ83 275 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 FBXL15Q9H469 300 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 C19orf67A6NJJ6 358 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 OR9G9P0C7N8 305 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 ZIC4Q8N9L1 334 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 LOC102723996A0A087X1L8 192 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 TRBV20OR9-2A0A075B6H5 130 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 A0A1W2PS18 150 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 ATP5G2Q06055 141 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 FAM166AQ6J272 317 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 MBD3L1Q8WWY6 194 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 MEGF9Q9H1U4 602 aa16.6■□□□□ 0.25
SOX4-201ENST00000244745 IGHV3-66A0A0C4DH42 116 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms