RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 GNB1LQ9BYB4 327 aa11.72□□□□□ -0.53
TARDBP-201ENST00000240185 IGHV5-10-1A0A0J9YXX1 117 aa11.72□□□□□ -0.53
TARDBP-201ENST00000240185 IFI27L1Q96BM0 104 aa11.72□□□□□ -0.53
TARDBP-201ENST00000240185 MGST2Q99735 147 aa11.72□□□□□ -0.53
TARDBP-201ENST00000240185 CEP290O15078 2479 aa11.72□□□□□ -0.53
TARDBP-201ENST00000240185 TSPAN7P41732 249 aa11.72□□□□□ -0.53
TARDBP-201ENST00000240185 SRSF1Q07955 248 aaKnown RBP eCLIP11.72□□□□□ -0.533e-7■□□□□ 11.1
TARDBP-201ENST00000240185 UBE2V1Q13404 147 aa11.72□□□□□ -0.53
TARDBP-201ENST00000240185 FAM71F2Q6NXP2 309 aa11.72□□□□□ -0.53
TARDBP-201ENST00000240185 KLF14Q8TD94 323 aaPredicted RBP11.72□□□□□ -0.53
TARDBP-201ENST00000240185 NXT2Q9NPJ8 142 aaKnown RBP11.72□□□□□ -0.53
TARDBP-201ENST00000240185 OSTCQ9NRP0 149 aa11.72□□□□□ -0.53
TARDBP-201ENST00000240185 MYO5AQ9Y4I1 1855 aaKnown RBP11.72□□□□□ -0.53
TARDBP-201ENST00000240185 PHLDA1Q8WV24 401 aaPredicted RBP11.71□□□□□ -0.53
TARDBP-201ENST00000240185 CLEC7AQ9BXN2 247 aa11.71□□□□□ -0.53
TARDBP-201ENST00000240185 S4R3C0 116 aa11.71□□□□□ -0.53
TARDBP-201ENST00000240185 COLCA2A8K830 154 aa11.71□□□□□ -0.53
TARDBP-201ENST00000240185 FOXA2Q9Y261 457 aaPredicted RBP11.71□□□□□ -0.53
TARDBP-201ENST00000240185 A0A1W2PRE2 83 aa11.71□□□□□ -0.54
TARDBP-201ENST00000240185 TNFRSF6BO95407 300 aa11.71□□□□□ -0.54
TARDBP-201ENST00000240185 DEFB123Q8N688 67 aa11.71□□□□□ -0.54
TARDBP-201ENST00000240185 RNF126Q9BV68 326 aa11.71□□□□□ -0.54
TARDBP-201ENST00000240185 PLSCR4Q9NRQ2 329 aa11.71□□□□□ -0.54
TARDBP-201ENST00000240185 IGHV3-23P01764 117 aa11.71□□□□□ -0.54
TARDBP-201ENST00000240185 C1QL4Q86Z23 238 aa11.71□□□□□ -0.54
TARDBP-201ENST00000240185 CHCHD1Q96BP2 118 aaKnown RBP11.71□□□□□ -0.54
TARDBP-201ENST00000240185 CHTOPQ9Y3Y2 248 aaKnown RBP11.71□□□□□ -0.54
TARDBP-201ENST00000240185 MDC1Q14676 2089 aaKnown RBP11.7□□□□□ -0.54
TARDBP-201ENST00000240185 C17orf98A8MV24 154 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 PROB1E7EW31 1015 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 M0R2P5 195 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 C1QL2Q7Z5L3 287 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 BCL6BQ8N143 479 aaPredicted RBP11.7□□□□□ -0.54
TARDBP-201ENST00000240185 TAF1P21675 1872 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 GLRX5Q86SX6 157 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 A0A0U1RRA0 63 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 NAPSAO96009 420 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 LY6EQ16553 131 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 PRSS53Q2L4Q9 553 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 OSR1Q8TAX0 266 aaPredicted RBP11.7□□□□□ -0.54
TARDBP-201ENST00000240185 TRBV24-1A0A075B6N3 115 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 A0A0G2JK05 382 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 CXCL1P09341 107 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 SPINK8P0C7L1 97 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 GNG5P63218 68 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 LHX8Q68G74 356 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 OCC1Q8TAD7 63 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 LOXL4Q96JB6 756 aa11.7□□□□□ -0.54
TARDBP-201ENST00000240185 RSPO3Q9BXY4 272 aaPredicted RBP11.7□□□□□ -0.54
TARDBP-201ENST00000240185 SSC5DA1L4H1 1573 aa11.69□□□□□ -0.54
TARDBP-201ENST00000240185 FOXL1Q12952 345 aa11.69□□□□□ -0.54
TARDBP-201ENST00000240185 C9orf50Q5SZB4 431 aa11.69□□□□□ -0.54
TARDBP-201ENST00000240185 FABP5P3A8MUU1 101 aa11.69□□□□□ -0.54
TARDBP-201ENST00000240185 FGF16O43320 207 aa11.69□□□□□ -0.54
TARDBP-201ENST00000240185 CLEC2AQ6UVW9 174 aa11.69□□□□□ -0.54
TARDBP-201ENST00000240185 C1orf122Q6ZSJ8 110 aa11.69□□□□□ -0.54
TARDBP-201ENST00000240185 SLC25A28Q96A46 364 aa11.69□□□□□ -0.54
TARDBP-201ENST00000240185 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.69□□□□□ -0.54
TARDBP-201ENST00000240185 WNK3Q9BYP7 1800 aa11.69□□□□□ -0.54
TARDBP-201ENST00000240185 IGKV1-8A0A0C4DH67 115 aa11.69□□□□□ -0.54
TARDBP-201ENST00000240185 C12orf77C9JDV5 145 aa11.69□□□□□ -0.54
TARDBP-201ENST00000240185 CD69Q07108 199 aa11.69□□□□□ -0.54
TARDBP-201ENST00000240185 CD300EQ496F6 205 aaPredicted RBP11.69□□□□□ -0.54
TARDBP-201ENST00000240185 PLPPR1Q8TBJ4 325 aa11.69□□□□□ -0.54
TARDBP-201ENST00000240185 DUX3Q96PT4 197 aa11.69□□□□□ -0.54
TARDBP-201ENST00000240185 LTBP4Q8N2S1 1624 aa11.69□□□□□ -0.54
TARDBP-201ENST00000240185 CCL21O00585 134 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 PPBPP02775 128 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 COX5BP10606 129 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 ZNRF1Q8ND25 227 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 CRIM1Q9NZV1 1036 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 IGKV1D-42A0A075B6H8 117 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 A0A1B0GTI1 187 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 LOC101059948A0A1B0GTJ6 334 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 GAGE12BA1L429 117 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 IFNL4K9M1U5 179 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 PSG1P11464 419 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 MPV17L2Q567V2 206 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 TEX38Q6PEX7 206 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 CACNG8Q8WXS5 425 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 CKAP5Q14008 2032 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 ESPL1Q14674 2120 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 TNRC6CQ9HCJ0 1690 aaKnown RBP11.68□□□□□ -0.54
TARDBP-201ENST00000240185 ABCA1O95477 2261 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 CELA2AP08217 269 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 ORMDL2Q53FV1 153 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 TRPM6Q9BX84 2022 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 F8VVB4 439 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 F8VWA3 439 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 LGALS1P09382 135 aaKnown RBP11.68□□□□□ -0.54
TARDBP-201ENST00000240185 RNASE4P34096 147 aaKnown RBP11.68□□□□□ -0.54
TARDBP-201ENST00000240185 PYY3Q5JQD4 70 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 ATP5L2Q7Z4Y8 100 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 TM2D1Q9BX74 207 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 EPDR1Q9UM22 224 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 IGHV3OR16-8A0A075B7F1 116 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 EGR4Q05215 589 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 OTORQ9NRC9 128 aa11.68□□□□□ -0.54
TARDBP-201ENST00000240185 TRGV3P03979 118 aa11.67□□□□□ -0.54
TARDBP-201ENST00000240185 OR5P3Q8WZ94 311 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms