RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 MARC2Q969Z3 335 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 WDR61Q9GZS3 305 aaKnown RBP10.6□□□□□ -0.71
SLIRP-201ENST00000238688 SMDT1Q9H4I9 107 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 NARFLQ9H6Q4 476 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 ZNRD1Q9P1U0 126 aa10.6□□□□□ -0.71
SLIRP-201ENST00000238688 TRAV20A0A0B4J274 112 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 TEX50A0A1B0GTY4 177 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 B4DSR2 109 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 CORTO00230 105 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 FBXO24O75426 580 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 VENTXO95231 258 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 HBE1P02100 147 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 CRYGBP07316 175 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 BRS3P32247 399 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 BPIFB3P59826 476 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 LCN2P80188 198 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 RAB31Q13636 194 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 PRSS8Q16651 343 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 FAM74A1Q5RGS3 127 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 AKR1C8PQ5T2L2 129 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 ETV3LQ6ZN32 361 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 HAPLN4Q86UW8 402 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 ZNF709Q8N972 641 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 HSD17B11Q8NBQ5 300 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 OR2T10Q8NGZ9 312 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 RNASEH2CQ8TDP1 164 aaKnown RBP10.59□□□□□ -0.71
SLIRP-201ENST00000238688 TAF15Q92804 592 aaKnown RBP eCLIP10.59□□□□□ -0.71
SLIRP-201ENST00000238688 BSCL2Q96G97 398 aaPredicted RBP10.59□□□□□ -0.71
SLIRP-201ENST00000238688 SIRT7Q9NRC8 400 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 C1RLQ9NZP8 487 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 KIAA1456Q9P272 454 aa10.59□□□□□ -0.71
SLIRP-201ENST00000238688 ANK2Q01484 3957 aa10.58□□□□□ -0.71
SLIRP-201ENST00000238688 TRAV3A0A0B4J244 114 aa10.58□□□□□ -0.72
SLIRP-201ENST00000238688 TRAV1-1A0A0B4J248 108 aa10.58□□□□□ -0.72
SLIRP-201ENST00000238688 NDUFA3O95167 84 aa10.58□□□□□ -0.72
SLIRP-201ENST00000238688 SNRNP70P08621 437 aaKnown RBP10.58□□□□□ -0.72
SLIRP-201ENST00000238688 MDKP21741 143 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-201ENST00000238688 GPX4P36969 197 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-201ENST00000238688 SNCAP37840 140 aa10.58□□□□□ -0.72
SLIRP-201ENST00000238688 PSG5Q15238 335 aa10.58□□□□□ -0.72
SLIRP-201ENST00000238688 PXDC1Q5TGL8 231 aa10.58□□□□□ -0.72
SLIRP-201ENST00000238688 PPP1R27Q86WC6 154 aa10.58□□□□□ -0.72
SLIRP-201ENST00000238688 OR1L6Q8NGR2 347 aa10.58□□□□□ -0.72
SLIRP-201ENST00000238688 CFHR4Q92496 578 aa10.58□□□□□ -0.72
SLIRP-201ENST00000238688 ZNF430Q9H8G1 570 aaPredicted RBP10.58□□□□□ -0.72
SLIRP-201ENST00000238688 SIGLEC9Q9Y336 463 aa10.58□□□□□ -0.72
SLIRP-201ENST00000238688 PRSS46E5RG02 174 aa10.57□□□□□ -0.72
SLIRP-201ENST00000238688 RNASEK-C17orf49H0YIS7 233 aa10.57□□□□□ -0.72
SLIRP-201ENST00000238688 J3QLI3 93 aa10.57□□□□□ -0.72
SLIRP-201ENST00000238688 TIMM23O14925 209 aa10.57□□□□□ -0.72
SLIRP-201ENST00000238688 SLC25A17O43808 307 aa10.57□□□□□ -0.72
SLIRP-201ENST00000238688 PRH1P02810 166 aa10.57□□□□□ -0.72
SLIRP-201ENST00000238688 IFNA4P05014 189 aa10.57□□□□□ -0.72
SLIRP-201ENST00000238688 MSMBP08118 114 aa10.57□□□□□ -0.72
SLIRP-201ENST00000238688 CAMLGP49069 296 aa10.57□□□□□ -0.72
SLIRP-201ENST00000238688 PJVKQ0ZLH3 352 aa10.57□□□□□ -0.72
SLIRP-201ENST00000238688 DIAPH2-AS1Q14236 149 aa10.57□□□□□ -0.72
SLIRP-201ENST00000238688 OR8G2PQ6IF36 304 aa10.57□□□□□ -0.72
SLIRP-201ENST00000238688 TBX15Q96SF7 602 aa10.57□□□□□ -0.72
SLIRP-201ENST00000238688 NPVFQ9HCQ7 196 aa10.57□□□□□ -0.72
SLIRP-201ENST00000238688 WDR83OSQ9Y284 106 aa10.57□□□□□ -0.72
SLIRP-201ENST00000238688 A0A1B0GW64 132 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 RRHO14718 337 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 NBR2O15453 112 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 NDUFS6O75380 124 aaKnown RBP10.56□□□□□ -0.72
SLIRP-201ENST00000238688 AVPP01185 164 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 FAM106CPP0CH98 169 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 HNF1AP20823 631 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 TAGLN2P37802 199 aaKnown RBP10.56□□□□□ -0.72
SLIRP-201ENST00000238688 RPL27AP46776 148 aaKnown RBP10.56□□□□□ -0.72
SLIRP-201ENST00000238688 ARL16Q0P5N6 197 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 PMS2P11Q13670 270 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 AANATQ16613 207 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 PVRIGQ6DKI7 326 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 ETFRF1Q6IPR1 90 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 BTNL8Q6UX41 500 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 Q6ZRG5 221 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 RBMXL1Q96E39 390 aaKnown RBP10.56□□□□□ -0.72
SLIRP-201ENST00000238688 CITED4Q96RK1 184 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 PBDC1Q9BVG4 233 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 C19orf24Q9BVV8 132 aa10.56□□□□□ -0.72
SLIRP-201ENST00000238688 UBE2L5PA0A1B0GUS4 154 aa10.55□□□□□ -0.72
SLIRP-201ENST00000238688 ANKRD34BA5PLL1 514 aa10.55□□□□□ -0.72
SLIRP-201ENST00000238688 CYB5BO43169 146 aa10.55□□□□□ -0.72
SLIRP-201ENST00000238688 TSPAN15O95858 294 aa10.55□□□□□ -0.72
SLIRP-201ENST00000238688 ZP3P21754 424 aa10.55□□□□□ -0.72
SLIRP-201ENST00000238688 TMEM41BQ5BJD5 291 aa10.55□□□□□ -0.72
SLIRP-201ENST00000238688 CXorf58Q96LI9 332 aa10.55□□□□□ -0.72
SLIRP-201ENST00000238688 HIF1ANQ9NWT6 349 aa10.55□□□□□ -0.72
SLIRP-201ENST00000238688 METTL1Q9UBP6 276 aaKnown RBP10.55□□□□□ -0.72
SLIRP-201ENST00000238688 NPFFO15130 113 aa10.54□□□□□ -0.72
SLIRP-201ENST00000238688 CA2P00918 260 aa10.54□□□□□ -0.72
SLIRP-201ENST00000238688 RNASE2P10153 161 aaKnown RBP10.54□□□□□ -0.72
SLIRP-201ENST00000238688 OPRK1P41145 380 aa10.54□□□□□ -0.72
SLIRP-201ENST00000238688 TEPPQ6URK8 271 aa10.54□□□□□ -0.72
SLIRP-201ENST00000238688 TMEM182Q6ZP80 229 aaPredicted RBP10.54□□□□□ -0.72
SLIRP-201ENST00000238688 Q8N6K4 173 aa10.54□□□□□ -0.72
SLIRP-201ENST00000238688 NPCDR1Q9BY65 106 aa10.54□□□□□ -0.72
SLIRP-201ENST00000238688 SH3BGRL3Q9H299 93 aa10.54□□□□□ -0.72
SLIRP-201ENST00000238688 LSM4Q9Y4Z0 139 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms