RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 GNG4P50150 75 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 PLGLB1Q02325 96 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 PQLC2Q6ZP29 291 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 ZNF645Q8N7E2 425 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 OR4P4Q8NGL7 312 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 YTHDF2Q9Y5A9 579 aaKnown RBP11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 U3KQA8 63 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 LOC102723996A0A087X1L8 192 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 K7EN84 100 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 GTF2H5Q6ZYL4 71 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 OR8B3Q8NGG8 313 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 DUSP23Q9BVJ7 150 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 GNB1LQ9BYB4 327 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 FAM181BA6NEQ2 426 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 OR9G9P0C7N8 305 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 RPL8P62917 257 aaKnown RBP11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 FAM71F2Q6NXP2 309 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 MDP1Q86V88 176 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 KIR3DL3Q8N743 410 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 RTL8AQ9BWD3 113 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 ABI3Q9P2A4 366 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 MPC1Q9Y5U8 109 aa11.75□□□□□ -0.53
PCDHB3-201ENST00000231130 HCFC1P51610 2035 aa11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 FAM231BA6NCW3 169 aa11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 H3BUT2 72 aa11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 DNPH1O43598 174 aa11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 LINC00869P0C866 280 aa11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 BRWD1-AS2P59051 145 aa11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 OR4A16Q8NH70 328 aa11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 MS4A5Q9H3V2 200 aa11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 TMEM238LA0A1B0GVL6 79 aa11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 C15orf62A8K5M9 175 aa11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 FAM90A26D6RGX4 464 aa11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 OR10J3Q5JRS4 329 aa11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 SSX8Q7RTT4 187 aa11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 C5orf17Q8NAS9 161 aa11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 SSBP4Q9BWG4 385 aaPredicted RBP11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 STRADBQ9C0K7 418 aa11.74□□□□□ -0.53
PCDHB3-201ENST00000231130 TRAV3A0A0B4J244 114 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 MFAP2P55001 183 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 TIGITQ495A1 244 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 WFDC12Q8WWY7 111 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 ZNF576Q9H609 170 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 SH2D2AQ9NP31 389 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 GNG12Q9UBI6 72 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 METRNQ9UJH8 293 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 HILPDAQ9Y5L2 63 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 GVINP1Q7Z2Y8 2422 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 CGAP01215 116 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 MT-ND6P03923 174 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 DEFB125Q8N687 156 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 SFXN3Q9BWM7 321 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 CXCL12P48061 93 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 LYSMD4Q5XG99 296 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 LEAP2Q969E1 77 aa11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 PHF7Q9BWX1 381 aaPredicted RBP11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 UBE2ZQ9H832 354 aaPredicted RBP11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 MRPS17Q9Y2R5 130 aaKnown RBP11.73□□□□□ -0.53
PCDHB3-201ENST00000231130 HELTA6NFD8 242 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 OR10J4P0C629 311 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 CRYBB3P26998 211 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 LPAL2Q16609 132 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 TREML4Q6UXN2 200 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 TMEM136Q6ZRR5 245 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 TMEM70Q9BUB7 260 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 THYN1Q9P016 225 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 CEP192Q8TEP8 1941 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 A0A1B0GV72 72 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 FOXA3P55318 350 aaPredicted RBP11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 RBPJQ06330 500 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 SCGB2A2Q13296 93 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 CENPWQ5EE01 88 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 MOB1BQ7L9L4 216 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 TMEM251Q8N6I4 163 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 SAP25Q8TEE9 199 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 FAM216AQ8WUB2 273 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 EAF1Q96JC9 268 aaPredicted RBP11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 BOD1L1Q8NFC6 3051 aa11.72□□□□□ -0.53
PCDHB3-201ENST00000231130 TMEM30CPA0ZSE6 113 aa11.71□□□□□ -0.53
PCDHB3-201ENST00000231130 MYOD1P15172 320 aa11.71□□□□□ -0.53
PCDHB3-201ENST00000231130 ARG2P78540 354 aa11.71□□□□□ -0.53
PCDHB3-201ENST00000231130 DEFB127Q9H1M4 99 aa11.71□□□□□ -0.53
PCDHB3-201ENST00000231130 LOXL2Q9Y4K0 774 aa11.71□□□□□ -0.53
PCDHB3-201ENST00000231130 POLEQ07864 2286 aa11.71□□□□□ -0.53
PCDHB3-201ENST00000231130 C22orf46C9J442 243 aa11.71□□□□□ -0.53
PCDHB3-201ENST00000231130 HLA-DQA1P01909 254 aa11.71□□□□□ -0.53
PCDHB3-201ENST00000231130 AZU1P20160 251 aa11.71□□□□□ -0.53
PCDHB3-201ENST00000231130 OR13A1Q8NGR1 328 aa11.71□□□□□ -0.53
PCDHB3-201ENST00000231130 MGST2Q99735 147 aa11.71□□□□□ -0.53
PCDHB3-201ENST00000231130 WDR83OSQ9Y284 106 aa11.71□□□□□ -0.53
PCDHB3-201ENST00000231130 POLDIP2Q9Y2S7 368 aa11.71□□□□□ -0.53
PCDHB3-201ENST00000231130 TRBV6-6A0A0A6YYG2 114 aa11.71□□□□□ -0.54
PCDHB3-201ENST00000231130 TRBV9A0A0B4J1U6 114 aa11.71□□□□□ -0.54
PCDHB3-201ENST00000231130 ZNF207O43670 478 aaKnown RBP11.71□□□□□ -0.54
PCDHB3-201ENST00000231130 AMY1AP04745 511 aa11.71□□□□□ -0.54
PCDHB3-201ENST00000231130 SLAQ13239 276 aa11.71□□□□□ -0.54
PCDHB3-201ENST00000231130 IL11RAQ14626 422 aa11.71□□□□□ -0.54
PCDHB3-201ENST00000231130 RPL39P5Q59GN2 51 aa11.71□□□□□ -0.54
PCDHB3-201ENST00000231130 DCAF12Q5T6F0 453 aa11.71□□□□□ -0.54
PCDHB3-201ENST00000231130 SLC25A40Q8TBP6 338 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms