RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 COL8A1P27658 744 aa16.86■□□□□ 0.29
SNX3-201ENST00000230085 RPL31P62899 125 aaKnown RBP16.86■□□□□ 0.29
SNX3-201ENST00000230085 PSG7Q13046 419 aa16.86■□□□□ 0.29
SNX3-201ENST00000230085 RPEL1Q2QD12 228 aa16.86■□□□□ 0.29
SNX3-201ENST00000230085 C1orf162Q8NEQ5 155 aaPredicted RBP16.86■□□□□ 0.29
SNX3-201ENST00000230085 C1orf159Q96HA4 380 aa16.86■□□□□ 0.29
SNX3-201ENST00000230085 VAMP8Q9BV40 100 aa16.86■□□□□ 0.29
SNX3-201ENST00000230085 AURKAIP1Q9NWT8 199 aaPredicted RBP16.86■□□□□ 0.29
SNX3-201ENST00000230085 V9GYV3 84 aa16.86■□□□□ 0.29
SNX3-201ENST00000230085 CRYBG3Q68DQ2 2970 aa16.85■□□□□ 0.29
SNX3-201ENST00000230085 RRHO14718 337 aa16.85■□□□□ 0.29
SNX3-201ENST00000230085 RBMXL2O75526 392 aaKnown RBP16.85■□□□□ 0.29
SNX3-201ENST00000230085 IL6RP08887 468 aaPredicted RBP16.85■□□□□ 0.29
SNX3-201ENST00000230085 CTRLP40313 264 aa16.85■□□□□ 0.29
SNX3-201ENST00000230085 RELBQ01201 579 aa16.85■□□□□ 0.29
SNX3-201ENST00000230085 AESQ08117 197 aa16.85■□□□□ 0.29
SNX3-201ENST00000230085 ALKBH2Q6NS38 261 aa16.85■□□□□ 0.29
SNX3-201ENST00000230085 FAM90A1Q86YD7 464 aa16.85■□□□□ 0.29
SNX3-201ENST00000230085 SLC25A40Q8TBP6 338 aa16.85■□□□□ 0.29
SNX3-201ENST00000230085 CORO2AQ92828 525 aa16.85■□□□□ 0.29
SNX3-201ENST00000230085 HSPB9Q9BQS6 159 aa16.85■□□□□ 0.29
SNX3-201ENST00000230085 NCOR1P1Q9H4R4 102 aa16.85■□□□□ 0.29
SNX3-201ENST00000230085 OSTCQ9NRP0 149 aa16.85■□□□□ 0.29
SNX3-201ENST00000230085 PGPEP1LA6NFU8 196 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 IRF2P14316 349 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 CBLN1P23435 193 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 TIMM23BQ5SRD1 257 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 ZNF705AQ6ZN79 300 aaPredicted RBP16.84■□□□□ 0.29
SNX3-201ENST00000230085 PNKDQ8N490 385 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 ANKHD1Q8IWZ3 2542 aaKnown RBP16.84■□□□□ 0.29
SNX3-201ENST00000230085 PROP1O75360 226 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 GPX1P07203 203 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 THBDP07204 575 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 ATP5IP56385 69 aaPredicted RBP16.84■□□□□ 0.29
SNX3-201ENST00000230085 CX3CL1P78423 397 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 PRR20EP86478 221 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 PRR20CP86479 221 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 PRR20DP86480 221 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 PRR20BP86481 221 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 PRR20AP86496 221 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 EFNB3Q15768 340 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 SMIM21Q3B7S5 101 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 Q8N976 141 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 OR1L6Q8NGR2 347 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 OR4A16Q8NH70 328 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 MRGPRDQ8TDS7 321 aa16.84■□□□□ 0.29
SNX3-201ENST00000230085 PATZ1Q9HBE1 687 aaKnown RBP16.84■□□□□ 0.29
SNX3-201ENST00000230085 NBPF19A0A087WUL8 3843 aa16.83■□□□□ 0.29
SNX3-201ENST00000230085 PRAMEF5Q5TYX0 476 aa16.83■□□□□ 0.28
SNX3-201ENST00000230085 PRAMEF6Q5VXH4 476 aa16.83■□□□□ 0.28
SNX3-201ENST00000230085 MIC13Q5XKP0 118 aa16.83■□□□□ 0.28
SNX3-201ENST00000230085 WDR82Q6UXN9 313 aa16.83■□□□□ 0.28
SNX3-201ENST00000230085 Q6ZR03 302 aa16.83■□□□□ 0.28
SNX3-201ENST00000230085 MYPOPQ86VE0 399 aaPredicted RBP16.83■□□□□ 0.28
SNX3-201ENST00000230085 MMD2Q8IY49 270 aa16.83■□□□□ 0.28
SNX3-201ENST00000230085 OR13A1Q8NGR1 328 aa16.83■□□□□ 0.28
SNX3-201ENST00000230085 LPAR2Q9HBW0 351 aa16.83■□□□□ 0.28
SNX3-201ENST00000230085 TMEM167BQ9NRX6 74 aa16.83■□□□□ 0.28
SNX3-201ENST00000230085 SLC45A2Q9UMX9 530 aa16.83■□□□□ 0.28
SNX3-201ENST00000230085 SLC25A15Q9Y619 301 aa16.83■□□□□ 0.28
SNX3-201ENST00000230085 GRIFINA4D1Z8 144 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 G0S2P27469 103 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 HOXC12P31275 282 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 GABRA2P47869 451 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 ERVK-16P61578 105 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 RAB31Q13636 194 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 RTL8BQ17RB0 113 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 TEPPQ6URK8 271 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 Q8TCH9 128 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 C19orf24Q9BVV8 132 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 HEYLQ9NQ87 328 aaPredicted RBP16.82■□□□□ 0.28
SNX3-201ENST00000230085 ZNF586Q9NXT0 402 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 PSG11Q9UQ72 335 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 F2RL2O00254 374 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 OR5G3P0C626 314 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 GPR12P47775 334 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 CEBPDP49716 269 aaPredicted RBP16.82■□□□□ 0.28
SNX3-201ENST00000230085 ALKBH6Q3KRA9 238 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 COL5A1-AS1Q5SY13 56 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 C1orf174Q8IYL3 243 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 KLF14Q8TD94 323 aaPredicted RBP16.82■□□□□ 0.28
SNX3-201ENST00000230085 DDB2Q92466 427 aa16.82■□□□□ 0.28
SNX3-201ENST00000230085 FOXA2Q9Y261 457 aaPredicted RBP16.82■□□□□ 0.28
SNX3-201ENST00000230085 FCN1O00602 326 aa16.81■□□□□ 0.28
SNX3-201ENST00000230085 GRPP07492 148 aa16.81■□□□□ 0.28
SNX3-201ENST00000230085 POU2AF1Q16633 256 aa16.81■□□□□ 0.28
SNX3-201ENST00000230085 HLA-DRB5Q30154 266 aa16.81■□□□□ 0.28
SNX3-201ENST00000230085 RASL11AQ6T310 242 aa16.81■□□□□ 0.28
SNX3-201ENST00000230085 BAGE3Q86Y29 109 aa16.81■□□□□ 0.28
SNX3-201ENST00000230085 BAGE2Q86Y30 109 aa16.81■□□□□ 0.28
SNX3-201ENST00000230085 WFDC8Q8IUA0 241 aa16.81■□□□□ 0.28
SNX3-201ENST00000230085 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.81■□□□□ 0.28
SNX3-201ENST00000230085 NEUROG1Q92886 237 aa16.81■□□□□ 0.28
SNX3-201ENST00000230085 SPOCK3Q9BQ16 436 aa16.81■□□□□ 0.28
SNX3-201ENST00000230085 TCF19Q9Y242 345 aa16.81■□□□□ 0.28
SNX3-201ENST00000230085 DCHS2Q6V1P9 2916 aa16.81■□□□□ 0.28
SNX3-201ENST00000230085 C15orf61A6NNL5 157 aa16.8■□□□□ 0.28
SNX3-201ENST00000230085 ISLRO14498 428 aa16.8■□□□□ 0.28
SNX3-201ENST00000230085 SSTR5P35346 364 aa16.8■□□□□ 0.28
SNX3-201ENST00000230085 RPS16P62249 146 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms