RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 IZUMO1RA6ND01 250 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 C9orf172C9J069 976 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 KIR2DS2P43631 304 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 PPOXP50336 477 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 UBE2V1Q13404 147 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 STUMQ69YW2 141 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 NABP2Q9BQ15 211 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 IFI27L2Q9H2X8 130 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 GAL3ST2Q9H3Q3 398 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 SLC35D1Q9NTN3 355 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 TMEM14BQ9NUH8 114 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 FOXA2Q9Y261 457 aaPredicted RBP11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 TRAV34A0A0B4J273 112 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 HSPE1P61604 102 aaKnown RBP11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 WIPF2Q8TF74 440 aaPredicted RBP11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 TECRQ9NZ01 308 aaKnown RBP11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 K7EP13 123 aa11.48□□□□□ -0.57
SCNN1A-201ENST00000228916 ZNF134P52741 427 aa11.48□□□□□ -0.57
SCNN1A-201ENST00000228916 SLAQ13239 276 aa11.48□□□□□ -0.57
SCNN1A-201ENST00000228916 EDDM3AQ14507 147 aa11.48□□□□□ -0.57
SCNN1A-201ENST00000228916 MAJINQ3KP22 176 aa11.48□□□□□ -0.57
SCNN1A-201ENST00000228916 NTF3P20783 257 aa11.48□□□□□ -0.57
SCNN1A-201ENST00000228916 HINT1P49773 126 aaPredicted RBP11.48□□□□□ -0.57
SCNN1A-201ENST00000228916 LOXL3P58215 753 aa11.48□□□□□ -0.57
SCNN1A-201ENST00000228916 CR1LQ2VPA4 569 aa11.48□□□□□ -0.57
SCNN1A-201ENST00000228916 LCN12Q6JVE5 192 aa11.48□□□□□ -0.57
SCNN1A-201ENST00000228916 RASL11AQ6T310 242 aa11.48□□□□□ -0.57
SCNN1A-201ENST00000228916 UNQ5815/PRO19632Q6UWF5 114 aa11.48□□□□□ -0.57
SCNN1A-201ENST00000228916 ATOH7Q8N100 152 aa11.48□□□□□ -0.57
SCNN1A-201ENST00000228916 TUBG2Q9NRH3 451 aa11.48□□□□□ -0.57
SCNN1A-201ENST00000228916 BET1LQ9NYM9 111 aa11.48□□□□□ -0.57
SCNN1A-201ENST00000228916 ACP1P24666 158 aa11.47□□□□□ -0.57
SCNN1A-201ENST00000228916 MEOX1P50221 254 aa11.47□□□□□ -0.57
SCNN1A-201ENST00000228916 ARL6IP6Q8N6S5 226 aa11.47□□□□□ -0.57
SCNN1A-201ENST00000228916 ZNF738Q8NE65 137 aa11.47□□□□□ -0.57
SCNN1A-201ENST00000228916 OR4S2Q8NH73 311 aa11.47□□□□□ -0.57
SCNN1A-201ENST00000228916 COMMD5Q9GZQ3 224 aa11.47□□□□□ -0.57
SCNN1A-201ENST00000228916 A0A1W2PNU3 283 aaPredicted RBP11.47□□□□□ -0.57
SCNN1A-201ENST00000228916 USF1P22415 310 aaPredicted RBP11.47□□□□□ -0.57
SCNN1A-201ENST00000228916 IGHV1-2P23083 117 aa11.47□□□□□ -0.57
SCNN1A-201ENST00000228916 C1orf229Q6ZS94 237 aaPredicted RBP11.47□□□□□ -0.57
SCNN1A-201ENST00000228916 SPACA3Q8IXA5 215 aa11.47□□□□□ -0.57
SCNN1A-201ENST00000228916 PNKDQ8N490 385 aa11.47□□□□□ -0.57
SCNN1A-201ENST00000228916 DEFB127Q9H1M4 99 aa11.47□□□□□ -0.57
SCNN1A-201ENST00000228916 ABI3Q9P2A4 366 aa11.47□□□□□ -0.57
SCNN1A-201ENST00000228916 TRAV9-2A0A087WT02 112 aa11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 A0A1W2PRE2 83 aa11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 ITGB1BP1O14713 200 aa11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 PRDX2P32119 198 aa11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 LPAL2Q16609 132 aa11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 OR4A47Q6IF82 309 aa11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 OR4F17Q8NGA8 305 aa11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 C22orf15Q8WYQ4 148 aa11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 ZNF331Q9NQX6 463 aaPredicted RBP11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 IGHV2OR16-5A0A0B4J2B6 119 aa11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 F2RL2O00254 374 aa11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 MGST1P10620 155 aaKnown RBP11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 TNXAQ16473 311 aa11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 TBR1Q16650 682 aa11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 RTL8BQ17RB0 113 aa11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 Q6ZVH6 145 aa11.46□□□□□ -0.57
SCNN1A-201ENST00000228916 IGKV1OR2-108A0A075B7D4 117 aa11.46□□□□□ -0.58
SCNN1A-201ENST00000228916 OR7C2O60412 319 aa11.46□□□□□ -0.58
SCNN1A-201ENST00000228916 KLF5Q13887 457 aaPredicted RBP11.46□□□□□ -0.58
SCNN1A-201ENST00000228916 MBD6Q96DN6 1003 aa11.46□□□□□ -0.58
SCNN1A-201ENST00000228916 ENY2Q9NPA8 101 aa11.46□□□□□ -0.58
SCNN1A-201ENST00000228916 SERTAD4Q9NUC0 356 aa11.46□□□□□ -0.58
SCNN1A-201ENST00000228916 PRR14LQ5THK1 2151 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 IGHV1-69-2A0A0G2JMI3 117 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 FAM181BA6NEQ2 426 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 H0YJW9 148 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 CA1P00915 261 aaPredicted RBP11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 ALKBH2Q6NS38 261 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 EBLN2Q6P2I7 272 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 INO80CQ6PI98 192 aaPredicted RBP11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 OR8B3Q8NGG8 313 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 OR2D3Q8NGH3 330 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 FAM168AQ92567 244 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 OR8B2Q96RD0 313 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 C19orf24Q9BVV8 132 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 PLEKHA3Q9HB20 300 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 LOC105371242A0A075B767 164 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 IGLC7A0M8Q6 106 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 TAS2R45P59539 299 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 LYG1Q8N1E2 194 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 GCM1Q9NP62 436 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 IDI2-AS1Q9NZ38 188 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 SPRR3Q9UBC9 169 aa11.45□□□□□ -0.58
SCNN1A-201ENST00000228916 LYZL6O75951 148 aa11.44□□□□□ -0.58
SCNN1A-201ENST00000228916 IGHV3-13P01766 116 aa11.44□□□□□ -0.58
SCNN1A-201ENST00000228916 IGHV3-7P01780 117 aa11.44□□□□□ -0.58
SCNN1A-201ENST00000228916 RNFT1Q5M7Z0 435 aa11.44□□□□□ -0.58
SCNN1A-201ENST00000228916 MUC15Q8N387 334 aa11.44□□□□□ -0.58
SCNN1A-201ENST00000228916 ZPBPQ9BS86 351 aa11.44□□□□□ -0.58
SCNN1A-201ENST00000228916 ZDBF2Q9HCK1 2354 aa11.44□□□□□ -0.58
SCNN1A-201ENST00000228916 HSBP1O75506 76 aa11.44□□□□□ -0.58
SCNN1A-201ENST00000228916 IGLL1P15814 213 aa11.44□□□□□ -0.58
SCNN1A-201ENST00000228916 CDKN1BP46527 198 aa11.44□□□□□ -0.58
SCNN1A-201ENST00000228916 SAPCD1Q5SSQ6 148 aa11.44□□□□□ -0.58
SCNN1A-201ENST00000228916 GDF5OSQ5U4N7 250 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms