RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 A0A1W2PRF3 423 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 A0A1W2PRM7 423 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 G6PCP35575 357 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 BAGE3Q86Y29 109 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 BAGE2Q86Y30 109 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 GBGT1Q8N5D6 347 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 ZNF709Q8N972 641 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 BEND2Q8NDZ0 799 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 CMTM2Q8TAZ6 248 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 ZDHHC16Q969W1 377 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 WDR61Q9GZS3 305 aaKnown RBP9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 DLEU1O43261 78 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 COX6B1P14854 86 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 CFHR2P36980 270 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 GPR6P46095 362 aaPredicted RBP9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 ATOH7Q8N100 152 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 GAFA1Q96PS6 74 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 RAB40CQ96S21 281 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 M0R1X1 148 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 LHBP01229 141 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 EFNB3Q15768 340 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 KIAA1644Q3SXP7 199 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 STUMQ69YW2 141 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 RNASEH2CQ8TDP1 164 aaKnown RBP9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 BTF3L4Q96K17 158 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 TMEM242Q9NWH2 141 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 ONECUT1Q9UBC0 465 aa9.63□□□□□ -0.87
TNFAIP1-201ENST00000226225 A0A1W2PPR1 153 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 F2Z2F3 143 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 SLC17A3O00476 420 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 IGKV1-39P01597 117 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 IGKV1D-39P04432 117 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 ADMP35318 185 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 ZNF788Q6ZQV5 615 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 ZNF114Q8NC26 417 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 IGKV1-5P01602 117 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 FRMD6-AS1P0C7T7 363 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 COX7A1P24310 79 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 DLX1P56177 255 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 LRRC75BQ2VPJ9 315 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 RAB9BQ9NP90 201 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 H0Y980 276 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 OR10J1P30954 320 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 REG1BP48304 166 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 RNF151Q2KHN1 245 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 ACOT6Q3I5F7 207 aaPredicted RBP9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 ACTL10Q5JWF8 245 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 ASPHD1Q5U4P2 390 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 C11orf42Q8N5U0 333 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 NRGNQ92686 78 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 ACY3Q96HD9 319 aa9.62□□□□□ -0.87
TNFAIP1-201ENST00000226225 OR10X1Q8NGY0 326 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 CBY1Q9Y3M2 126 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 CATR1Q13166 79 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 C1orf194Q5T5A4 169 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 ETFRF1Q6IPR1 90 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 DRAM1Q8N682 238 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 OR8B3Q8NGG8 313 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 ZNF714Q96N38 554 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 OR8B2Q96RD0 313 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 VAMP8Q9BV40 100 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 DSCAMO60469 2012 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 CREBBPQ92793 2442 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 RAMP3O60896 148 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 ADH4P08319 380 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 PMCHP20382 165 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 MMDQ15546 238 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 Q8TCH9 128 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 MBD3L1Q8WWY6 194 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 NEIL1Q96FI4 390 aaPredicted RBP9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 PERPQ96FX8 193 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 CCL19Q99731 98 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 HINT2Q9BX68 163 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 GAL3ST2Q9H3Q3 398 aa9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 MBNL3Q9NUK0 354 aaKnown RBP9.61□□□□□ -0.87
TNFAIP1-201ENST00000226225 TACC2O95359 2948 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 FCGR3BO75015 233 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 NPPCP23582 126 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 ATP5J2P56134 94 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 ZNF90Q03938 601 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 P2RX4Q99571 388 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 ZNRD1Q9P1U0 126 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 TRAV1-1A0A0B4J248 108 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 DUXBA0A1W2PPF3 345 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 SERF1AO75920 110 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 TCL1AP56279 114 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 ARF6P62330 175 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 RPL39P5Q59GN2 51 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 SP5Q6BEB4 398 aaPredicted RBP9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 TRAT1Q6PIZ9 186 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 KBTBD11-OT1A0A1B0GTJ5 212 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 SLC25A6P12236 298 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 RAB4AP20338 218 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 Q6ZWC4 215 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 DNAJC4Q9NNZ3 241 aa9.6□□□□□ -0.87
TNFAIP1-201ENST00000226225 MDFIC2A0A1B0GVS7 189 aa9.59□□□□□ -0.87
TNFAIP1-201ENST00000226225 A0A1W2PPV4 95 aa9.59□□□□□ -0.87
TNFAIP1-201ENST00000226225 IER3P46695 156 aa9.59□□□□□ -0.87
TNFAIP1-201ENST00000226225 ARHGAP32A7KAX9 2087 aa9.59□□□□□ -0.87
TNFAIP1-201ENST00000226225 TLN2Q9Y4G6 2542 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms