RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 RIPPLY3P57055 190 aa21.31■■□□□ 1
CHMP4B-201ENST00000217402 CYCSP99999 105 aaKnown RBP21.31■■□□□ 1
CHMP4B-201ENST00000217402 RAB32Q13637 225 aa21.31■■□□□ 1
CHMP4B-201ENST00000217402 LRRC37A5PQ49AS3 106 aa21.31■■□□□ 1
CHMP4B-201ENST00000217402 LCNL1Q6ZST4 164 aa21.31■■□□□ 1
CHMP4B-201ENST00000217402 MS4A10Q96PG2 267 aa21.31■■□□□ 1
CHMP4B-201ENST00000217402 ZNF436Q9C0F3 470 aaPredicted RBP21.31■■□□□ 1
CHMP4B-201ENST00000217402 RCL1Q9Y2P8 373 aaKnown RBP21.31■■□□□ 1
CHMP4B-201ENST00000217402 IGHG4P01861 327 aa21.3■■□□□ 1
CHMP4B-201ENST00000217402 CRYGCP07315 174 aa21.3■■□□□ 1
CHMP4B-201ENST00000217402 PF4V1P10720 104 aa21.3■■□□□ 1
CHMP4B-201ENST00000217402 SNCAP37840 140 aa21.3■■□□□ 1
CHMP4B-201ENST00000217402 TEX38Q6PEX7 206 aa21.3■■□□□ 1
CHMP4B-201ENST00000217402 INS-IGF2F8WCM5 200 aa21.29■■□□□ 1
CHMP4B-201ENST00000217402 K7EPK0 472 aa21.29■■□□□ 1
CHMP4B-201ENST00000217402 IGLV1-40P01703 118 aa21.29■■□□□ 1
CHMP4B-201ENST00000217402 C11orf44Q8N8P7 122 aa21.29■■□□□ 1
CHMP4B-201ENST00000217402 WIPF2Q8TF74 440 aaPredicted RBP21.29■■□□□ 1
CHMP4B-201ENST00000217402 P2RX4Q99571 388 aa21.29■■□□□ 1
CHMP4B-201ENST00000217402 DEFA5Q01523 94 aa21.29■■□□□ 1
CHMP4B-201ENST00000217402 HIST2H2BDQ6DRA6 164 aa21.29■■□□□ 1
CHMP4B-201ENST00000217402 F11RQ9Y624 299 aaKnown RBP21.29■■□□□ 1
CHMP4B-201ENST00000217402 OR4X2Q8NGF9 303 aa21.28■■□□□ 1
CHMP4B-201ENST00000217402 PPP1R1CQ8WVI7 109 aa21.28■■□□□ 1
CHMP4B-201ENST00000217402 KLK15Q9H2R5 256 aa21.28■■□□□ 1
CHMP4B-201ENST00000217402 PSMB8P28062 276 aa21.27■■□□□ 1
CHMP4B-201ENST00000217402 SRSF4Q08170 494 aaKnown RBP21.27■■□□□ 1
CHMP4B-201ENST00000217402 TMEM65Q6PI78 240 aa21.27■■□□□ 1
CHMP4B-201ENST00000217402 SLC24A4Q8NFF2 622 aa21.27■■□□□ 1
CHMP4B-201ENST00000217402 CHAC2Q8WUX2 184 aa21.27■■□□□ 1
CHMP4B-201ENST00000217402 WFDC12Q8WWY7 111 aa21.27■■□□□ 1
CHMP4B-201ENST00000217402 H3BP45 60 aa21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 IFNA10P01566 189 aa21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 RNASE2P10153 161 aaKnown RBP21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 MFAP2P55001 183 aa21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 FOXE3Q13461 319 aa21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 ZNF114Q8NC26 417 aa21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 CIB3Q96Q77 187 aaPredicted RBP21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 DMRT1Q9Y5R6 373 aa21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 TMEM50AO95807 157 aa21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 TRGV3P03979 118 aa21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 GIPP09681 153 aaPredicted RBP21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 CD28P10747 220 aa21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 HTR2BP41595 481 aa21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 TPPP2P59282 170 aa21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 KRTAP10-3P60369 221 aa21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 CD83Q01151 205 aa21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 SLC25A24Q6NUK1 477 aa21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 OR1P1Q8NH06 330 aa21.26■□□□□ 0.99
CHMP4B-201ENST00000217402 RPLP1P05386 114 aaKnown RBP21.25■□□□□ 0.99
CHMP4B-201ENST00000217402 ELANEP08246 267 aa21.25■□□□□ 0.99
CHMP4B-201ENST00000217402 TCTEX1D4Q5JR98 221 aa21.25■□□□□ 0.99
CHMP4B-201ENST00000217402 COMMD1Q8N668 190 aa21.25■□□□□ 0.99
CHMP4B-201ENST00000217402 FANCD2OSQ96PS1 177 aa21.25■□□□□ 0.99
CHMP4B-201ENST00000217402 RAB40CQ96S21 281 aa21.25■□□□□ 0.99
CHMP4B-201ENST00000217402 PAIP2BQ9ULR5 123 aaKnown RBP21.25■□□□□ 0.99
CHMP4B-201ENST00000217402 H3BUA1 57 aa21.24■□□□□ 0.99
CHMP4B-201ENST00000217402 L7N2F9 121 aa21.24■□□□□ 0.99
CHMP4B-201ENST00000217402 OR2J3O76001 311 aa21.24■□□□□ 0.99
CHMP4B-201ENST00000217402 NPY1RP25929 384 aa21.24■□□□□ 0.99
CHMP4B-201ENST00000217402 RAB9AP51151 201 aa21.24■□□□□ 0.99
CHMP4B-201ENST00000217402 VAMP2P63027 116 aa21.24■□□□□ 0.99
CHMP4B-201ENST00000217402 BSXQ3C1V8 233 aa21.24■□□□□ 0.99
CHMP4B-201ENST00000217402 ZFP57Q9NU63 452 aa21.24■□□□□ 0.99
CHMP4B-201ENST00000217402 PSENENQ9NZ42 101 aa21.24■□□□□ 0.99
CHMP4B-201ENST00000217402 IGLV11-55A0A075B6I3 123 aa21.23■□□□□ 0.99
CHMP4B-201ENST00000217402 SUB1P53999 127 aaKnown RBP eCLIP21.23■□□□□ 0.998e-14■■□□□ 13.4
CHMP4B-201ENST00000217402 RHOGP84095 191 aa21.23■□□□□ 0.99
CHMP4B-201ENST00000217402 KHDC1LQ5JSQ8 128 aa21.23■□□□□ 0.99
CHMP4B-201ENST00000217402 SPANXN5Q5MJ07 72 aa21.23■□□□□ 0.99
CHMP4B-201ENST00000217402 TMEM170AQ8WVE7 144 aa21.23■□□□□ 0.99
CHMP4B-201ENST00000217402 SLA2Q9H6Q3 261 aa21.23■□□□□ 0.99
CHMP4B-201ENST00000217402 U3KQ87 197 aa21.23■□□□□ 0.99
CHMP4B-201ENST00000217402 PAX9P55771 341 aa21.22■□□□□ 0.99
CHMP4B-201ENST00000217402 MISP3Q96FF7 219 aa21.22■□□□□ 0.99
CHMP4B-201ENST00000217402 OR4C12Q96R67 309 aa21.22■□□□□ 0.99
CHMP4B-201ENST00000217402 CYB5BO43169 146 aa21.22■□□□□ 0.99
CHMP4B-201ENST00000217402 DEDDO75618 318 aa21.22■□□□□ 0.99
CHMP4B-201ENST00000217402 MPC2O95563 127 aa21.22■□□□□ 0.99
CHMP4B-201ENST00000217402 PVALBP20472 110 aaPredicted RBP21.22■□□□□ 0.99
CHMP4B-201ENST00000217402 BCAP31P51572 246 aa21.22■□□□□ 0.99
CHMP4B-201ENST00000217402 RAP2BP61225 183 aa21.22■□□□□ 0.99
CHMP4B-201ENST00000217402 SMIM8Q96KF7 97 aa21.22■□□□□ 0.99
CHMP4B-201ENST00000217402 OR5AC2Q9NZP5 309 aa21.22■□□□□ 0.99
CHMP4B-201ENST00000217402 FBXL7Q9UJT9 491 aa21.22■□□□□ 0.99
CHMP4B-201ENST00000217402 TRBV9A0A0B4J1U6 114 aa21.21■□□□□ 0.99
CHMP4B-201ENST00000217402 H0YIZ8 118 aa21.21■□□□□ 0.99
CHMP4B-201ENST00000217402 RLN2P04090 185 aa21.21■□□□□ 0.99
CHMP4B-201ENST00000217402 HIST1H1BP16401 226 aaKnown RBP21.21■□□□□ 0.99
CHMP4B-201ENST00000217402 C2orf83Q53S99 150 aa21.21■□□□□ 0.99
CHMP4B-201ENST00000217402 RNF152Q8N8N0 203 aa21.21■□□□□ 0.99
CHMP4B-201ENST00000217402 OR1L6Q8NGR2 347 aa21.21■□□□□ 0.99
CHMP4B-201ENST00000217402 ASB13Q8WXK3 278 aa21.21■□□□□ 0.99
CHMP4B-201ENST00000217402 C15orf62A8K5M9 175 aa21.2■□□□□ 0.98
CHMP4B-201ENST00000217402 NDUFB8O95169 186 aa21.2■□□□□ 0.98
CHMP4B-201ENST00000217402 LY86O95711 162 aa21.2■□□□□ 0.98
CHMP4B-201ENST00000217402 RPL23AP62750 156 aaKnown RBP21.2■□□□□ 0.98
CHMP4B-201ENST00000217402 NECAP1Q8NC96 275 aa21.2■□□□□ 0.98
CHMP4B-201ENST00000217402 PINX1Q96BK5 328 aaKnown RBP21.2■□□□□ 0.98
CHMP4B-201ENST00000217402 CITED2Q99967 270 aaPredicted RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms