RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 SLC35E1Q96K37 410 aa13.99□□□□□ -0.17
VRK1-201ENST00000216639 MANBALQ9NQG1 85 aa13.99□□□□□ -0.17
VRK1-201ENST00000216639 IGHV2-70DA0A0C4DH43 119 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 CGB1A6NKQ9 187 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 OOSP1A8MZH6 123 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 E7EUB6 86 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 CEBPGP53567 150 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 LCN2P80188 198 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 KLRD1Q13241 179 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 HCP5Q6MZN7 132 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 CYB561D1Q8N8Q1 229 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 SSMEM1Q8WWF3 244 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 HILPDAQ9Y5L2 63 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 HMGB3O15347 200 aaKnown RBP13.98□□□□□ -0.17
VRK1-201ENST00000216639 FOXH1O75593 365 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 YIF1AO95070 293 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 VENTXO95231 258 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 IGHV4-39P01824 125 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 CNTFRP26992 372 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 LGALS4P56470 323 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 PLGLAQ15195 96 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 MRGPRG-AS1Q2M3A8 158 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 TMEM249Q2WGJ8 235 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 MINOS1Q5TGZ0 78 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 SLC16A13Q7RTY0 426 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 SLC35E3Q7Z769 313 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 IQCF2Q8IXL9 164 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 STPG3Q8N7X2 389 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 C1orf159Q96HA4 380 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 MINOS1-NBL1R4GNA1 71 aa13.98□□□□□ -0.17
VRK1-201ENST00000216639 SPTBN1Q01082 2364 aaKnown RBP13.97□□□□□ -0.17
VRK1-201ENST00000216639 COMPP49747 757 aaPredicted RBP13.97□□□□□ -0.17
VRK1-201ENST00000216639 LMO4P61968 165 aa13.97□□□□□ -0.17
VRK1-201ENST00000216639 GAMTQ14353 236 aa13.97□□□□□ -0.17
VRK1-201ENST00000216639 RHEBQ15382 184 aa13.97□□□□□ -0.17
VRK1-201ENST00000216639 AKIRIN2Q53H80 203 aa13.97□□□□□ -0.17
VRK1-201ENST00000216639 AWAT1Q58HT5 328 aa13.97□□□□□ -0.17
VRK1-201ENST00000216639 TMEM88Q6PEY1 159 aa13.97□□□□□ -0.17
VRK1-201ENST00000216639 IGFBPL1Q8WX77 278 aa13.97□□□□□ -0.17
VRK1-201ENST00000216639 SIRPDQ9H106 197 aa13.97□□□□□ -0.17
VRK1-201ENST00000216639 RPS10P5Q9NQ39 176 aa13.97□□□□□ -0.17
VRK1-201ENST00000216639 PUS1Q9Y606 427 aaKnown RBP eCLIP13.97□□□□□ -0.17
VRK1-201ENST00000216639 PRB1P04280 392 aa13.96□□□□□ -0.17
VRK1-201ENST00000216639 RHOBP62745 196 aa13.96□□□□□ -0.17
VRK1-201ENST00000216639 PAX2Q02962 417 aa13.96□□□□□ -0.17
VRK1-201ENST00000216639 HABP2Q14520 560 aaPredicted RBP13.96□□□□□ -0.17
VRK1-201ENST00000216639 GCSAMLQ5JQS6 135 aa13.96□□□□□ -0.17
VRK1-201ENST00000216639 LDLRAD2Q5SZI1 272 aa13.96□□□□□ -0.17
VRK1-201ENST00000216639 ETFRF1Q6IPR1 90 aa13.96□□□□□ -0.17
VRK1-201ENST00000216639 NIPSNAP3BQ9BS92 247 aa13.96□□□□□ -0.17
VRK1-201ENST00000216639 PIMREGQ9BSJ6 248 aa13.96□□□□□ -0.17
VRK1-201ENST00000216639 FBXL15Q9H469 300 aa13.96□□□□□ -0.17
VRK1-201ENST00000216639 SMCO4Q9NRQ5 59 aa13.96□□□□□ -0.17
VRK1-201ENST00000216639 NDUFS6O75380 124 aaKnown RBP13.95□□□□□ -0.18
VRK1-201ENST00000216639 EIF3GO75821 320 aaKnown RBP eCLIP13.95□□□□□ -0.18
VRK1-201ENST00000216639 TOX4O94842 621 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 MOSP00540 346 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 SNRNP70P08621 437 aaKnown RBP13.95□□□□□ -0.18
VRK1-201ENST00000216639 FBP1P09467 338 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 HOXB4P17483 251 aaPredicted RBP13.95□□□□□ -0.18
VRK1-201ENST00000216639 GNB1P62873 340 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 PRR20EP86478 221 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 PRR20CP86479 221 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 PRR20DP86480 221 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 PRR20BP86481 221 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 PRR20AP86496 221 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 MEF2BQ02080 365 aaPredicted RBP13.95□□□□□ -0.18
VRK1-201ENST00000216639 MMDQ15546 238 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 LHFPL4Q7Z7J7 247 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 CBLN2Q8IUK8 224 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 ZNF114Q8NC26 417 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 NANPQ8TBE9 248 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 CFHR4Q92496 578 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 IGLC7A0M8Q6 106 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 C7orf77A4D0Y5 90 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 H3BQ15 152 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 NBR2O15453 112 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 MT-CO2P00403 227 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 FAM168AQ92567 244 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 BBC3Q96PG8 261 aaPredicted RBP13.95□□□□□ -0.18
VRK1-201ENST00000216639 TMPRSS5Q9H3S3 457 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 SLC45A2Q9UMX9 530 aa13.95□□□□□ -0.18
VRK1-201ENST00000216639 A0A1W2PRD5 423 aa13.94□□□□□ -0.18
VRK1-201ENST00000216639 A0A1W2PRF3 423 aa13.94□□□□□ -0.18
VRK1-201ENST00000216639 A0A1W2PRM7 423 aa13.94□□□□□ -0.18
VRK1-201ENST00000216639 NDUFS8O00217 210 aa13.94□□□□□ -0.18
VRK1-201ENST00000216639 CORTO00230 105 aa13.94□□□□□ -0.18
VRK1-201ENST00000216639 TSPAN9O75954 239 aa13.94□□□□□ -0.18
VRK1-201ENST00000216639 CXorf1O96002 111 aa13.94□□□□□ -0.18
VRK1-201ENST00000216639 ZNF843Q8N446 348 aa13.94□□□□□ -0.18
VRK1-201ENST00000216639 OR2T10Q8NGZ9 312 aa13.94□□□□□ -0.18
VRK1-201ENST00000216639 SRSF8Q9BRL6 282 aaKnown RBP13.94□□□□□ -0.18
VRK1-201ENST00000216639 C20orf24Q9BUV8 137 aa13.94□□□□□ -0.18
VRK1-201ENST00000216639 TBL2Q9Y4P3 447 aaKnown RBP13.94□□□□□ -0.18
VRK1-201ENST00000216639 STAG3L2P0CL84 134 aa13.93□□□□□ -0.18
VRK1-201ENST00000216639 STAG3L3P0CL85 134 aa13.93□□□□□ -0.18
VRK1-201ENST00000216639 DEFA4P12838 97 aa13.93□□□□□ -0.18
VRK1-201ENST00000216639 OR10J1P30954 320 aa13.93□□□□□ -0.18
VRK1-201ENST00000216639 HES1Q14469 280 aa13.93□□□□□ -0.18
VRK1-201ENST00000216639 SSX2Q16385 188 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms