RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 NPBQ8NG41 125 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 NARS2Q96I59 477 aaKnown RBP12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 AJUBAQ96IF1 538 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 EAF1Q96JC9 268 aaPredicted RBP12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 SCRT1Q9BWW7 348 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 TMEM231Q9H6L2 316 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 FAM96BQ9Y3D0 163 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 POLQO75417 2590 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 TMEM218A2RU14 115 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 NBR2O15453 112 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 ACTL6BO94805 426 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 SNRNP70P08621 437 aaKnown RBP12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 SAA4P35542 130 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 RAB2AP61019 212 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 SSX7Q7RTT5 188 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 ZNF709Q8N972 641 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 C1orf159Q96HA4 380 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 RCC1LQ96I51 464 aaKnown RBP12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 MGST2Q99735 147 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 NPVFQ9HCQ7 196 aa12.48□□□□□ -0.41
LAPTM4A-201ENST00000175091 TRAV1-1A0A0B4J248 108 aa12.47□□□□□ -0.41
LAPTM4A-201ENST00000175091 SOX15O60248 233 aa12.47□□□□□ -0.41
LAPTM4A-201ENST00000175091 SLC25A16P16260 332 aa12.47□□□□□ -0.41
LAPTM4A-201ENST00000175091 ADCYAP1P18509 176 aa12.47□□□□□ -0.41
LAPTM4A-201ENST00000175091 EBI3Q14213 229 aa12.47□□□□□ -0.41
LAPTM4A-201ENST00000175091 Q8N6K4 173 aa12.47□□□□□ -0.41
LAPTM4A-201ENST00000175091 ZNF114Q8NC26 417 aa12.47□□□□□ -0.41
LAPTM4A-201ENST00000175091 OR2T10Q8NGZ9 312 aa12.47□□□□□ -0.41
LAPTM4A-201ENST00000175091 MALSU1Q96EH3 234 aa12.47□□□□□ -0.41
LAPTM4A-201ENST00000175091 GGTLC1Q9BX51 225 aa12.47□□□□□ -0.41
LAPTM4A-201ENST00000175091 A0A1B0GV50 99 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 HBE1P02100 147 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 MBP02144 154 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 OR13C7P0DN81 318 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 CD24P25063 80 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 KRTAP10-9P60411 292 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 CD69Q07108 199 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 GUK1Q16774 197 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 CLEC12BQ2HXU8 276 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 FFAR4Q5NUL3 377 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 MRPL41Q8IXM3 137 aaKnown RBP12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 RPP25LQ8N5L8 163 aaKnown RBP12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 SFT2D1Q8WV19 159 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 MBD3L1Q8WWY6 194 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 P2RX4Q99571 388 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 TREM1Q9NP99 234 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 KIAA1456Q9P272 454 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 ABCA12Q86UK0 2595 aa12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 MAP1AP78559 2803 aaPredicted RBP12.46□□□□□ -0.41
LAPTM4A-201ENST00000175091 NBPF19A0A087WUL8 3843 aa12.46□□□□□ -0.42
LAPTM4A-201ENST00000175091 CENPVL3A0A0U1RRI6 287 aa12.46□□□□□ -0.42
LAPTM4A-201ENST00000175091 TEX22C9J3V5 150 aa12.46□□□□□ -0.42
LAPTM4A-201ENST00000175091 NPFFO15130 113 aa12.46□□□□□ -0.42
LAPTM4A-201ENST00000175091 OPRK1P41145 380 aa12.46□□□□□ -0.42
LAPTM4A-201ENST00000175091 CCL20P78556 96 aa12.46□□□□□ -0.42
LAPTM4A-201ENST00000175091 HES1Q14469 280 aa12.46□□□□□ -0.42
LAPTM4A-201ENST00000175091 PLGLAQ15195 96 aa12.46□□□□□ -0.42
LAPTM4A-201ENST00000175091 PVRIGQ6DKI7 326 aa12.46□□□□□ -0.42
LAPTM4A-201ENST00000175091 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.46□□□□□ -0.426e-7■■■■■ 44.7
LAPTM4A-201ENST00000175091 TEPPQ6URK8 271 aa12.46□□□□□ -0.42
LAPTM4A-201ENST00000175091 PIP4P2Q8N4L2 257 aa12.46□□□□□ -0.42
LAPTM4A-201ENST00000175091 RNASEH2CQ8TDP1 164 aaKnown RBP12.46□□□□□ -0.42
LAPTM4A-201ENST00000175091 SRSF12Q8WXF0 261 aaKnown RBP12.46□□□□□ -0.42
LAPTM4A-201ENST00000175091 A0A096LNT2 108 aa12.45□□□□□ -0.42
LAPTM4A-201ENST00000175091 FCN1O00602 326 aa12.45□□□□□ -0.42
LAPTM4A-201ENST00000175091 MSMBP08118 114 aa12.45□□□□□ -0.42
LAPTM4A-201ENST00000175091 GNB1P62873 340 aa12.45□□□□□ -0.42
LAPTM4A-201ENST00000175091 KCNIP2Q9NS61 270 aa12.45□□□□□ -0.42
LAPTM4A-201ENST00000175091 C9JQL5 133 aa12.44□□□□□ -0.42
LAPTM4A-201ENST00000175091 J3QKU1 62 aa12.44□□□□□ -0.42
LAPTM4A-201ENST00000175091 AREGP15514 252 aa12.44□□□□□ -0.42
LAPTM4A-201ENST00000175091 M6PRP20645 277 aa12.44□□□□□ -0.42
LAPTM4A-201ENST00000175091 SUB1P53999 127 aaKnown RBP eCLIP12.44□□□□□ -0.422e-10■■■■■ 49.7
LAPTM4A-201ENST00000175091 SLC16A13Q7RTY0 426 aa12.44□□□□□ -0.42
LAPTM4A-201ENST00000175091 TMEM144Q7Z5S9 345 aa12.44□□□□□ -0.42
LAPTM4A-201ENST00000175091 CACNG8Q8WXS5 425 aa12.44□□□□□ -0.42
LAPTM4A-201ENST00000175091 PBDC1Q9BVG4 233 aa12.44□□□□□ -0.42
LAPTM4A-201ENST00000175091 CELSR1Q9NYQ6 3014 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 MAP1LC3B2A6NCE7 125 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 REG1AP05451 166 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 GPX4P36969 197 aaPredicted RBP12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 GAMTQ14353 236 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 C5orf64Q2M2E5 130 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 C10orf91Q5T1B1 145 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 OR10G4Q8NGN3 311 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 OR10G9Q8NGN4 311 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 OR10G7Q8NGN6 311 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 SRSF8Q9BRL6 282 aaKnown RBP12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 MAP1LC3BQ9GZQ8 125 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 SLC25A22Q9H936 323 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 PXMP4Q9Y6I8 212 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 APCP25054 2843 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 DOPEY2Q9Y3R5 2298 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 IGKV1OR2-108A0A075B7D4 117 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 TRAV40A0A0B4J280 105 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 CTXND1A0A1B0GTU2 59 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 YIF1AO95070 293 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 APOC3P02656 99 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 SFTA3P0C7M3 94 aa12.43□□□□□ -0.42
LAPTM4A-201ENST00000175091 ACOT6Q3I5F7 207 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms