RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 POLR3KQ9Y2Y1 108 aaPredicted RBP10.76□□□□□ -0.69
CTNS-201ENST00000046640 ZNF25P17030 456 aaPredicted RBP10.75□□□□□ -0.69
CTNS-201ENST00000046640 RPL15P61313 204 aaKnown RBP10.75□□□□□ -0.69
CTNS-201ENST00000046640 ADIPOQQ15848 244 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 BATFQ16520 125 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 H1FXQ92522 213 aaKnown RBP10.75□□□□□ -0.69
CTNS-201ENST00000046640 FAM103A1Q9BTL3 118 aaKnown RBP10.75□□□□□ -0.69
CTNS-201ENST00000046640 SEPSECSQ9HD40 501 aaKnown RBP10.75□□□□□ -0.69
CTNS-201ENST00000046640 WDR83OSQ9Y284 106 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 YTHDF2Q9Y5A9 579 aaKnown RBP10.75□□□□□ -0.69
CTNS-201ENST00000046640 F2Z2F3 143 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 PDE6DO43924 150 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 VENTXO95231 258 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 SFTPCP11686 197 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 PDLIM4P50479 330 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 TOMM20LQ6UXN7 152 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 MOB3BQ86TA1 216 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 OR4S2Q8NH73 311 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 ELOVL5Q9NYP7 299 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 NAGKQ9UJ70 344 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 THBDP07204 575 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 FAM87AP0C7U9 286 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 VDAC2P45880 294 aaPredicted RBP10.75□□□□□ -0.69
CTNS-201ENST00000046640 CR1LQ2VPA4 569 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 ZCCHC14Q8WYQ9 949 aaKnown RBP10.75□□□□□ -0.69
CTNS-201ENST00000046640 DDB2Q92466 427 aa10.75□□□□□ -0.69
CTNS-201ENST00000046640 SRRM4A7MD48 611 aaKnown RBP10.74□□□□□ -0.69
CTNS-201ENST00000046640 GATA4P43694 442 aa10.74□□□□□ -0.69
CTNS-201ENST00000046640 RELQ04864 619 aaPredicted RBP10.74□□□□□ -0.69
CTNS-201ENST00000046640 ZNF788Q6ZQV5 615 aa10.74□□□□□ -0.69
CTNS-201ENST00000046640 OR10G8Q8NGN5 311 aa10.74□□□□□ -0.69
CTNS-201ENST00000046640 DSCAML1Q8TD84 2053 aa10.74□□□□□ -0.69
CTNS-201ENST00000046640 PLXNB1O43157 2135 aa10.74□□□□□ -0.69
CTNS-201ENST00000046640 IER3P46695 156 aa10.74□□□□□ -0.69
CTNS-201ENST00000046640 DLX1P56177 255 aa10.74□□□□□ -0.69
CTNS-201ENST00000046640 RPL31P62899 125 aaKnown RBP10.74□□□□□ -0.69
CTNS-201ENST00000046640 OR4P4Q8NGL7 312 aa10.74□□□□□ -0.69
CTNS-201ENST00000046640 CMTM2Q8TAZ6 248 aa10.74□□□□□ -0.69
CTNS-201ENST00000046640 KCNIP2Q9NS61 270 aa10.74□□□□□ -0.69
CTNS-201ENST00000046640 IDI2-AS1Q9NZ38 188 aa10.74□□□□□ -0.69
CTNS-201ENST00000046640 PAM16Q9Y3D7 125 aa10.74□□□□□ -0.69
CTNS-201ENST00000046640 A6NNC1 897 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 GATA2P23769 480 aaPredicted RBP10.73□□□□□ -0.69
CTNS-201ENST00000046640 RAB7AP51149 207 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 MLANAQ16655 118 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 KIAA1644Q3SXP7 199 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 LYPD2Q6UXB3 125 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 FAM222BQ8WU58 562 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 SCNM1Q9BWG6 230 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 GGTLC1Q9BX51 225 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 SAP30LQ9HAJ7 183 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 SLC25A10Q9UBX3 287 aaPredicted RBP10.73□□□□□ -0.69
CTNS-201ENST00000046640 COL6A6A6NMZ7 2263 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 DCHS2Q6V1P9 2916 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 C17orf100A8MU93 164 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 M0R143 59 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 FCN3O75636 299 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 CA2P00918 260 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 TYMSP04818 313 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 TDGF1P3P51864 188 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 TCL1AP56279 114 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 DIAPH2-AS1Q14236 149 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 VWC2Q2TAL6 325 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 SPACA3Q8IXA5 215 aa10.73□□□□□ -0.69
CTNS-201ENST00000046640 K7EN84 100 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 CT45A6P0DMU7 189 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 CT45A5P0DMU8 189 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 CT45A7P0DMV0 189 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 CDKN1AP38936 164 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 ARSJQ5FYB0 599 aaPredicted RBP10.72□□□□□ -0.69
CTNS-201ENST00000046640 BAGE3Q86Y29 109 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 BAGE2Q86Y30 109 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 VN1R17PQ8TDU5 208 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 ENY2Q9NPA8 101 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 SPTBN4Q9H254 2564 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 C15orf61A6NNL5 157 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 SERF1AO75920 110 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 LCN2P80188 198 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 FXYD3Q14802 87 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 TMEM144Q7Z5S9 345 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 FAM216AQ8WUB2 273 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 HSPB9Q9BQS6 159 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 MRPL18Q9H0U6 180 aaKnown RBP10.72□□□□□ -0.69
CTNS-201ENST00000046640 OR51B2Q9Y5P1 312 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 CSMD1Q96PZ7 3565 aa10.72□□□□□ -0.69
CTNS-201ENST00000046640 FCN1O00602 326 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 IL6RP08887 468 aaPredicted RBP10.71□□□□□ -0.69
CTNS-201ENST00000046640 NBL1P41271 181 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 ERVFC1-1P60608 527 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 SLC24A4Q8NFF2 622 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 OR10W1Q8NGF6 305 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 OR1L6Q8NGR2 347 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 SLC35D1Q9NTN3 355 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 TANC2Q9HCD6 1990 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 CXorf1O96002 111 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 IGHV3-48P01763 117 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 NPY1RP25929 384 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 RPP30P78346 268 aaKnown RBP10.71□□□□□ -0.69
CTNS-201ENST00000046640 PRR31Q5SQ13 230 aa10.71□□□□□ -0.69
CTNS-201ENST00000046640 Q6ZWC4 215 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms