RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Aadacl4B1AVU5 407 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Gm11027G8JL69 66 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Itln1O88310 313 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Hoxa5P09021 270 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Cdx1P18111 268 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Gabrg3P27681 467 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Gpm6aP35802 278 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Nxph2Q61199 261 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Stk17bQ8BG48 372 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Gucd1Q8BZI6 239 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 6030452D12RikQ8CD33 222 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Adhfe1Q8R0N6 465 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Mrps18cQ8R2L5 143 aaKnown RBP9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Dtx2Q8R3P2 619 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Exosc2Q8VBV3 293 aaKnown RBP9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Olfr1447Q8VFX3 309 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Nkx6-1Q99MA9 365 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Tmem50aQ9CXL1 157 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Ociad2Q9D8W7 154 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Mecp2Q9Z2D6 484 aaKnown RBP9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Ccpg1osV9GXK1 122 aa9.3□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Trbv26A0A0B4J1P5 115 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Zfp942B8JJA7 486 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Cnih1O35372 144 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 PtgfrP43117 366 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 FusP56959 518 aaKnown RBP9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 H2-T22Q31615 379 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Srsf6Q3TWW8 339 aaKnown RBP9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Hspb6Q5EBG6 162 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Clec4b2Q67DU8 208 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Cdk3Q80YP0 303 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Zpld1Q8BGZ8 415 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Csnk1a1Q8BK63 337 aaKnown RBP9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Sdhaf4Q8BTE0 104 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Lrtm1Q8BXQ3 356 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Shisa2Q8QZV2 295 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Slc37a1Q8R070 531 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Rnf126Q91YL2 313 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Mus81Q91ZJ0 551 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Gar1Q9CY66 231 aaKnown RBP9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Fstl3Q9EQC7 256 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Dazap1Q9JII5 406 aaKnown RBP9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Atoh7Q9Z2E5 149 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 PtprbB2RU80 1998 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Yjefn3F6W8I0 251 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Ifna2P01573 190 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Dpagt1P42867 410 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Prrc1Q3UPH1 443 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Olfr11Q60890 313 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Slc22a27Q76M72 551 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 TxnipQ8BG60 397 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 PhyhiplQ8BGT8 375 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Fcrl1Q8R4Y0 343 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Olfr786Q8VFH8 312 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Tmem100Q9CQG9 134 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Rpp14Q9CQH8 122 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Rhebl1Q9D8T3 184 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Neu3Q9JMH7 418 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 MsmpB1AWI6 139 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Znf551B2RUI1 696 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Mpig6bD7PDD4 242 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Gm16519F8VQK7 162 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Vmn1r80L7N1Z3 308 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Sap30O88574 220 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Ifna7P06799 190 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 P10404 641 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 PpiaP17742 164 aaKnown RBP9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Mdga2P60755 949 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Prss38Q3UKY7 322 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Ino80cQ8BHA0 191 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Slc25a41Q8BVN7 312 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Xkr8Q8C0T0 401 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Vash2Q8C5G2 355 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Ntng2Q8R4F1 589 aaKnown RBP9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Olfr1030Q8VFL5 318 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Olfr1201Q8VGF5 307 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Ddb2Q99J79 432 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Tmem107Q9CPV0 140 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 D730048I06RikQ9CQB8 106 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 PifoQ9D9W1 207 aa9.29□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Olfr417F8VQB1 309 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 9130019O22RikG3X941 543 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 BatfO35284 125 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Dhrs3O88876 302 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 UevldQ3U1V6 471 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Taar8bQ5QD06 344 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Trav5d-4Q5R1F6 114 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Tas2r120Q7M721 295 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Smim37Q8BT35 56 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Spem2Q8C5U4 503 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Hsd17b13Q8VCR2 304 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Alkbh4Q9D8F1 300 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Nxpe5E0CX47 564 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Olfr556E9Q549 324 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Ankrd66J3QNN4 192 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Hprt1P00493 218 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Hist1h2bmP10854 126 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 SelenotP62342 195 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Rab1AP62821 205 aa9.28□□□□□ -0.92
Prpf40b-202ENSMUST00000118287 Hist1h2bhQ64478 126 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 54 ms