RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Gm20806Q9D9T3 227 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Mbnl1Q9JKP5 341 aaKnown RBP7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 RbmxQ9WV02 391 aaKnown RBP7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Tln2Q71LX4 2375 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Esp15A8R0U8 85 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 LplP11152 474 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr143P34985 313 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Rnase12Q5GAM8 145 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Rasl2-9Q61820 216 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 SspnQ62147 216 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Slc17a5Q8BN82 495 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Galnt14Q8BVG5 550 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Aimp2Q8R010 320 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Vmn1r73Q8R293 303 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Q8VCE4 163 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr1044Q8VGR9 314 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Wasf3Q8VHI6 501 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Tmem219Q9D123 240 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Tpsg1Q9QUL7 311 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 SncgQ9Z0F7 123 aaKnown RBP7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Vmn1r14H3BJ46 303 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gsc2P56916 198 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 S100a3P62818 101 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Rnft2Q3UF64 445 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Spata46Q4FZF2 204 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 B430306N03RikQ6QX36 289 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Slc25a32Q8BMG8 316 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Ly96Q9JHF9 160 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Hacd1Q9QY80 281 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm5493S4R2D1 92 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Nav2E9Q842 2432 aa7.26□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr1150-ps1A0A1L1STL1 316 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 1700025C18RikA2A580 89 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 MyadmO35682 320 aaKnown RBP7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 P01649 108 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Cryba1P02525 198 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 P18525 117 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Neurog3P70661 214 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Ssbp4Q3U4B1 363 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gpr55Q3UJF0 327 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Lcn12Q6JVL5 193 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Smim4Q8C1Q6 80 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Vmn1r178Q8R2B6 304 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr1259Q8VEZ1 309 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr126Q8VGF0 319 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Lpcat3Q91V01 487 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr101Q920Z0 308 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Lmo1Q924W9 156 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Eaf1Q9D4C5 268 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Mfsd4b2Q9D8I5 366 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Q9DAF8 208 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm20820A0A087WPP3 222 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm28102A0A087WQL3 222 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm20911A0A087WSS0 222 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm28870A0A0A6YW38 222 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Trbv29A0A0G2LB96 114 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr588-ps1A0A1B0GSZ2 313 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Ankrd60A2AMD2 318 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Pm20d2A3KG59 431 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 eef1akmt3D3YWP0 232 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr243E9PV96 316 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm4884E9PVP9 694 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Vmn1r204I7HIK1 302 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm3685J3QPP2 205 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Mcpt9O35164 246 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 DhodhO35435 395 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Klf9O35739 244 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 GzmaP11032 260 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Tpsab1Q02844 273 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Dtx3Q80V91 347 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 GgactQ923B0 149 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Ndufb7Q9CR61 137 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Mtfp1Q9CRB8 166 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Pgpep1lQ9CWB5 130 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Sapcd1Q9CY86 146 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Tmub1Q9JMG3 245 aa7.25□□□□□ -1.25
Trim39-201ENSMUST00000042717 Myo9aQ8C170 2542 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Ldlrad3A2AR95 345 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Vmn2r83E9Q0G7 864 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Mrpl23O35972 146 aaKnown RBP7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 C5ar1P30993 351 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Cks2P56390 79 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gpr160Q3U3F9 336 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Ctxn2Q3URE8 81 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Xaf1Q5NBU8 273 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Jagn1Q5XKN4 183 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Npy6rQ61212 371 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Tex261Q62302 196 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Smim12Q78RX3 92 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Cd226Q8K4F0 333 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Degs2Q8R2F2 323 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr401Q8VFX6 315 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr1280Q8VGG8 305 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Nxph3Q91VX5 252 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Sh2d6Q9D413 297 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Prr30Q9D9B7 401 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Hcfc1Q61191 2045 aaKnown RBP7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 A0A1L1SV24 88 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Znf385cA2A5E6 429 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm13547A2ARC0 163 aa7.24□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms