RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Pcbp4P57724 403 aaKnown RBP12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Tmem217Q14AF1 189 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Vstm2aQ8R0A6 236 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ctag2Q9D9S4 219 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Fbxl6Q9QXW0 535 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm10358A0A1D5RLD8 333 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 A0A1L1STL9 112 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 GapdhP16858 333 aaKnown RBP12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Q3UZV7 1028 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr1178Q7TR20 323 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Parp11Q8CFF0 331 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Tmprss3Q8K1T0 453 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Mrpl18Q9CQL5 180 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 HgfacQ9R098 653 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm3839S4R1W1 333 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm15821A6X8J8 139 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Mcpt9O35164 246 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Nipsnap2O55126 281 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Pgam5Q8BX10 288 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Rnps1Q99M28 305 aaKnown RBP12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 HpnO35453 436 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Hist1h2baP70696 127 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Cldn14Q9Z0S3 239 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 PrnA0A075B668 197 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm36864A0A1Y7VJE6 447 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm6890A2BG94 208 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 1700012B07RikQ3V0S8 276 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Smim9Q3V0X1 137 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Inca1Q6PKN7 231 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr1243Q8VGM7 305 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Plekhb1Q9QYE9 243 aa12.36□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr152G3X9L8 316 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 P04214 136 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Pdcd6P12815 191 aaKnown RBP12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 PpoxP51175 477 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 AdipoqQ60994 247 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Cldn15Q9Z0S5 227 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm3045A0A1D5RMA1 209 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Hoxa3P02831 443 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Serinc4Q5XK03 492 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Lnp1A0A1B0GSK3 178 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ajm1A2AJA9 974 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Defa28D3Z1V9 94 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Wnt10aP70701 417 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Defa25Q5G864 92 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 AfmidQ8K4H1 305 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Smdt1Q9DB10 107 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Nrg4Q9WTX4 115 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ldlrad3A2AR95 345 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gpm6bP35803 328 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Il11ra1Q64385 432 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Prelid3aQ8VE85 172 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr435Q8VFS3 313 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Wdr13Q91V09 485 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Pxmp4Q9JJW0 212 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Kcnj10Q9JM63 379 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Mgst2A2RST1 147 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Lbx1P52955 282 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Defb28Q3V2L0 89 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Sulf2Q8CFG0 875 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Hus1bQ8K572 276 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Tm4sf4Q91XD3 202 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Rab29Q91YQ1 204 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Cds2Q99L43 444 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm29049A0A087WSM5 227 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Zfp352A2AML7 551 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr1185-ps1F6XP16 303 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm21118J3QPK8 227 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Efnb2P52800 336 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm20909Q5FWB5 227 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm20852Q5M8R5 227 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm20917Q62457 227 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm20809Q62458 227 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm20865Q62460 227 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Igsf21Q7TNR6 468 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm20738Q810R8 227 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Scnm1Q8K136 229 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr95Q8VFE2 312 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gm20806Q9D9T3 227 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ackr1Q9QUI6 334 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Plp2Q9R1Q7 152 aa12.35□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Klk1b1P00755 261 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Cd7P50283 210 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 CrhQ8CIT0 187 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr976Q8VF15 326 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr828Q8VFM8 312 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Xcr1Q9R0M1 322 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Gpr34Q9R1K6 375 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ubald1Q6P3B2 176 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Olfr1344Q7TQV3 321 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 4930553M12RikQ9CUH1 165 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Ttc9bQ9D6E4 239 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Klk1b3P00756 261 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Mfap2P55002 183 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Atf1P81269 269 aaKnown RBP12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 ManealQ6P1J0 452 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Cd226Q8K4F0 333 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 ClcP97400 68 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Psg19Q4KL31 475 aa12.34□□□□□ -0.43
Col5a1-201ENSMUST00000028280 Zdhhc25Q810M4 279 aa12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 62.5 ms