RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 PLXNB1O43157 2135 aa13.83□□□□□ -0.2
PHGDH-230ENST00000641927 SMLR1H3BR10 107 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 BOLA2-SMG1P6H3BVE0 249 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 K7EPK0 472 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 SYNGR2O43760 224 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 MED6O75586 246 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 RNASE1P07998 156 aaKnown RBP13.82□□□□□ -0.2
PHGDH-230ENST00000641927 IAPPP10997 89 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 PSMB6P28072 239 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 UBA52P62987 128 aaKnown RBP13.82□□□□□ -0.2
PHGDH-230ENST00000641927 NDPQ00604 133 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 PRCDQ00LT1 54 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 Q6ZS46 218 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 SLC35E3Q7Z769 313 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 OR10W1Q8NGF6 305 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 NDUFA4L2Q9NRX3 87 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 TET2Q6N021 2002 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-230ENST00000641927 LINC01548A6NM66 108 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 MPC2O95563 127 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 CRYBA1P05813 215 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 DTD1Q8TEA8 209 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 PRSS22Q9GZN4 317 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 ZFP57Q9NU63 452 aa13.82□□□□□ -0.2
PHGDH-230ENST00000641927 RCL1Q9Y2P8 373 aaKnown RBP13.82□□□□□ -0.2
PHGDH-230ENST00000641927 CGB1A6NKQ9 187 aa13.81□□□□□ -0.2
PHGDH-230ENST00000641927 ATP6V0E1O15342 81 aa13.81□□□□□ -0.2
PHGDH-230ENST00000641927 KCNAB3O43448 404 aa13.81□□□□□ -0.2
PHGDH-230ENST00000641927 RLN2P04090 185 aa13.81□□□□□ -0.2
PHGDH-230ENST00000641927 PET100P0DJ07 73 aa13.81□□□□□ -0.2
PHGDH-230ENST00000641927 FGL1Q08830 312 aa13.81□□□□□ -0.2
PHGDH-230ENST00000641927 HIPK2Q9H2X6 1198 aa13.81□□□□□ -0.2
PHGDH-230ENST00000641927 HEYLQ9NQ87 328 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-230ENST00000641927 A0A1B0GW64 132 aa13.8□□□□□ -0.2
PHGDH-230ENST00000641927 A0A1W2PN81 502 aa13.8□□□□□ -0.2
PHGDH-230ENST00000641927 L7N2F9 121 aa13.8□□□□□ -0.2
PHGDH-230ENST00000641927 IGHG2P01859 326 aa13.8□□□□□ -0.2
PHGDH-230ENST00000641927 PVALBP20472 110 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-230ENST00000641927 CHRNA7P36544 502 aa13.8□□□□□ -0.2
PHGDH-230ENST00000641927 VAMP2P63027 116 aa13.8□□□□□ -0.2
PHGDH-230ENST00000641927 ECSCRQ19T08 205 aa13.8□□□□□ -0.2
PHGDH-230ENST00000641927 PDLIM3Q53GG5 364 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-230ENST00000641927 Q5BKY6 102 aa13.8□□□□□ -0.2
PHGDH-230ENST00000641927 C11orf87Q6NUJ2 197 aa13.8□□□□□ -0.2
PHGDH-230ENST00000641927 THAP6Q8TBB0 222 aa13.8□□□□□ -0.2
PHGDH-230ENST00000641927 FBXO7Q9Y3I1 522 aa13.8□□□□□ -0.2
PHGDH-230ENST00000641927 TEP1Q99973 2627 aaKnown RBP13.79□□□□□ -0.2
PHGDH-230ENST00000641927 REG1AP05451 166 aa13.79□□□□□ -0.2
PHGDH-230ENST00000641927 OR13C7P0DN81 318 aa13.79□□□□□ -0.2
PHGDH-230ENST00000641927 MRPL41Q8IXM3 137 aaKnown RBP13.79□□□□□ -0.2
PHGDH-230ENST00000641927 TCTE3Q8IZS6 198 aa13.79□□□□□ -0.2
PHGDH-230ENST00000641927 LFNGQ8NES3 379 aa13.79□□□□□ -0.2
PHGDH-230ENST00000641927 TAF15Q92804 592 aaKnown RBP eCLIP13.79□□□□□ -0.2
PHGDH-230ENST00000641927 LINC00527Q9UJ94 153 aa13.79□□□□□ -0.2
PHGDH-230ENST00000641927 TEX22C9J3V5 150 aa13.79□□□□□ -0.2
PHGDH-230ENST00000641927 DEDDO75618 318 aa13.79□□□□□ -0.2
PHGDH-230ENST00000641927 AREGP15514 252 aa13.79□□□□□ -0.2
PHGDH-230ENST00000641927 ERHP84090 104 aaKnown RBP13.79□□□□□ -0.2
PHGDH-230ENST00000641927 SRSF2Q01130 221 aaKnown RBP13.79□□□□□ -0.2
PHGDH-230ENST00000641927 TMEM95Q3KNT9 176 aa13.79□□□□□ -0.2
PHGDH-230ENST00000641927 SGMS2Q8NHU3 365 aa13.79□□□□□ -0.2
PHGDH-230ENST00000641927 CIB3Q96Q77 187 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-230ENST00000641927 RAB40CQ96S21 281 aa13.79□□□□□ -0.2
PHGDH-230ENST00000641927 OR5AC2Q9NZP5 309 aa13.79□□□□□ -0.2
PHGDH-230ENST00000641927 MBD2Q9UBB5 411 aa13.79□□□□□ -0.2
PHGDH-230ENST00000641927 WSB1Q9Y6I7 421 aa13.79□□□□□ -0.2
PHGDH-230ENST00000641927 TRAV14DV4A0A0A6YYC5 116 aa13.78□□□□□ -0.2
PHGDH-230ENST00000641927 IGLC7A0M8Q6 106 aa13.78□□□□□ -0.2
PHGDH-230ENST00000641927 H3BP45 60 aa13.78□□□□□ -0.2
PHGDH-230ENST00000641927 EGR2P11161 476 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-230ENST00000641927 SNCAP37840 140 aa13.78□□□□□ -0.2
PHGDH-230ENST00000641927 VDAC2P45880 294 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-230ENST00000641927 WT1-ASQ06250 92 aa13.78□□□□□ -0.2
PHGDH-230ENST00000641927 UNQ5815/PRO19632Q6UWF5 114 aa13.78□□□□□ -0.2
PHGDH-230ENST00000641927 ZNF702PQ9H963 129 aa13.78□□□□□ -0.2
PHGDH-230ENST00000641927 PSENENQ9NZ42 101 aa13.78□□□□□ -0.2
PHGDH-230ENST00000641927 PAIP2BQ9ULR5 123 aaKnown RBP13.78□□□□□ -0.2
PHGDH-230ENST00000641927 G3V318 75 aa13.77□□□□□ -0.21
PHGDH-230ENST00000641927 H0YIZ8 118 aa13.77□□□□□ -0.21
PHGDH-230ENST00000641927 AP4M1O00189 453 aa13.77□□□□□ -0.21
PHGDH-230ENST00000641927 IFNA10P01566 189 aa13.77□□□□□ -0.21
PHGDH-230ENST00000641927 CAV2P51636 162 aa13.77□□□□□ -0.21
PHGDH-230ENST00000641927 RPL23AP62750 156 aaKnown RBP13.77□□□□□ -0.21
PHGDH-230ENST00000641927 TMEM267Q0VDI3 215 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-230ENST00000641927 PRSS54Q6PEW0 395 aa13.77□□□□□ -0.21
PHGDH-230ENST00000641927 HSD17B13Q7Z5P4 300 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-230ENST00000641927 DCUN1D4Q92564 292 aa13.77□□□□□ -0.21
PHGDH-230ENST00000641927 NOL4LQ96MY1 436 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-230ENST00000641927 FXYD6-FXYD2A0A087WZ82 144 aa13.76□□□□□ -0.21
PHGDH-230ENST00000641927 TMEM50AO95807 157 aa13.76□□□□□ -0.21
PHGDH-230ENST00000641927 EIF2B2P49770 351 aaKnown RBP13.76□□□□□ -0.21
PHGDH-230ENST00000641927 RPL15P61313 204 aaKnown RBP13.76□□□□□ -0.21
PHGDH-230ENST00000641927 SPANXN5Q5MJ07 72 aa13.76□□□□□ -0.21
PHGDH-230ENST00000641927 OR5T1Q8NG75 326 aa13.76□□□□□ -0.21
PHGDH-230ENST00000641927 OR2T6Q8NHC8 308 aa13.76□□□□□ -0.21
PHGDH-230ENST00000641927 SRSF8Q9BRL6 282 aaKnown RBP13.76□□□□□ -0.21
PHGDH-230ENST00000641927 RNF126Q9BV68 326 aa13.76□□□□□ -0.21
PHGDH-230ENST00000641927 NIPBLQ6KC79 2804 aaeCLIP13.76□□□□□ -0.21
PHGDH-230ENST00000641927 TRAV41A0A0B4J266 112 aa13.75□□□□□ -0.21
PHGDH-230ENST00000641927 E5RGE8 158 aa13.75□□□□□ -0.21
PHGDH-230ENST00000641927 IGF1P05019 195 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms