RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 DUXBA0A1W2PPF3 345 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 HMX3A6NHT5 357 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 MARCH11A6NNE9 402 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 NCBP2LA6PVI3 153 aaKnown RBP7.78□□□□□ -1.16
PHGDH-222ENST00000641587 AP4M1O00189 453 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 RBMXL2O75526 392 aaKnown RBP7.78□□□□□ -1.16
PHGDH-222ENST00000641587 SIX6O95475 246 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 MOSP00540 346 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 IGKV1-39P01597 117 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 IGKV1D-39P04432 117 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 VDAC1P21796 283 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 FHL3Q13643 280 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 VMA21Q3ZAQ7 101 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 TMEM177Q53S58 311 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 VKORC1L1Q8N0U8 176 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 OR2T10Q8NGZ9 312 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 OSR1Q8TAX0 266 aaPredicted RBP7.78□□□□□ -1.16
PHGDH-222ENST00000641587 EAF1Q96JC9 268 aaPredicted RBP7.78□□□□□ -1.16
PHGDH-222ENST00000641587 TSNAXQ99598 290 aaKnown RBP7.78□□□□□ -1.16
PHGDH-222ENST00000641587 AIFM2Q9BRQ8 373 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 TMED3Q9Y3Q3 217 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 SMAD5-AS1Q9Y6J3 95 aa7.78□□□□□ -1.16
PHGDH-222ENST00000641587 DBX1A6NMT0 343 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 SLC25A17O43808 307 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 IGKV1-5P01602 117 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 SAA1P0DJI8 122 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-222ENST00000641587 SULT1A3P0DMM9 295 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 SULT1A4P0DMN0 295 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 LYL1P12980 280 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 CDX1P47902 265 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-222ENST00000641587 CFHR3Q02985 330 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 FOXE3Q13461 319 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 PLGLAQ15195 96 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 MMDQ15546 238 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 IZUMO4Q1ZYL8 232 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 IAH1Q2TAA2 248 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-222ENST00000641587 OR4A47Q6IF82 309 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 ADAMTSL5Q6ZMM2 481 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 Q8N6K4 173 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 RNF152Q8N8N0 203 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 OR11H1Q8NG94 326 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 OR11H7Q8NGC8 314 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 OR1S1Q8NH92 325 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 C4orf3Q8WVX3 66 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 SEC22AQ96IW7 307 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 RHOVQ96L33 236 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 SPIN2AQ99865 258 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 SPIN2BQ9BPZ2 258 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 GNB4Q9HAV0 340 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 TMEM140Q9NV12 185 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 GSKIPQ9P0R6 139 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 KIAA1456Q9P272 454 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 CACNG5Q9UF02 275 aa7.77□□□□□ -1.17
PHGDH-222ENST00000641587 PLECQ15149 4684 aaKnown RBP7.77□□□□□ -1.17
PHGDH-222ENST00000641587 A0A0G2JRQ6 117 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 MPTX1A8MV57 137 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 NBR2O15453 112 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 CCNKO75909 580 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 SNAPC5O75971 98 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 NXPH3O95157 252 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 SCGB1D2O95969 90 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 ELANEP08246 267 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 FRMD6-AS1P0C7T7 363 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 TRAPPC2P0DI81 140 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 TRAPPC2BP0DI82 140 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 CXCL3P19876 107 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 CNTFRP26992 372 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 LGALS7P47929 136 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 OR2B8PP59922 312 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 EBI3Q14213 229 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 NMSQ5H8A3 153 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 AKAP14Q86UN6 197 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 FAM219AQ8IW50 185 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 OR4A16Q8NH70 328 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 VSTM2AQ8TAG5 236 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 LSM10Q969L4 123 aaKnown RBP7.76□□□□□ -1.17
PHGDH-222ENST00000641587 GPR146Q96CH1 333 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 RITA1Q96K30 269 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 OR5B12Q96R08 314 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 ZNF436Q9C0F3 470 aaPredicted RBP7.76□□□□□ -1.17
PHGDH-222ENST00000641587 KLK15Q9H2R5 256 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 PLSCR3Q9NRY6 295 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 METTL1Q9UBP6 276 aaKnown RBP7.76□□□□□ -1.17
PHGDH-222ENST00000641587 NSG2Q9Y328 171 aa7.76□□□□□ -1.17
PHGDH-222ENST00000641587 SRRM4A7MD48 611 aaKnown RBP7.75□□□□□ -1.17
PHGDH-222ENST00000641587 PFDN1O60925 122 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 OR2A4O95047 310 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 SPDEFO95238 335 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 IGHG4P01861 327 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 OR9G9P0C7N8 305 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 PSMB8P28062 276 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 F2RL1P55085 397 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 H2BFSP57053 126 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 S100A10P60903 97 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 UBE2KP61086 200 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 GNB1P62873 340 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 SMCO1Q147U7 214 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 PSG5Q15238 335 aa7.75□□□□□ -1.17
PHGDH-222ENST00000641587 ZBTB8BQ8NAP8 495 aaPredicted RBP7.75□□□□□ -1.17
PHGDH-222ENST00000641587 OR10C1Q96KK4 312 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms