RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 MARCH11A6NNE9 402 aa10.45□□□□□ -0.74
LINC00339-211ENST00000641009 SCAF4O95104 1147 aaKnown RBP10.45□□□□□ -0.74
LINC00339-211ENST00000641009 NAT1P18440 290 aa10.45□□□□□ -0.74
LINC00339-211ENST00000641009 F2RP25116 425 aa10.45□□□□□ -0.74
LINC00339-211ENST00000641009 ERVK-16P61578 105 aa10.45□□□□□ -0.74
LINC00339-211ENST00000641009 BTNL8Q6UX41 500 aa10.45□□□□□ -0.74
LINC00339-211ENST00000641009 TSPAN14Q8NG11 270 aa10.45□□□□□ -0.74
LINC00339-211ENST00000641009 OR5H2Q8NGV7 314 aa10.45□□□□□ -0.74
LINC00339-211ENST00000641009 FCAMRQ8WWV6 532 aa10.45□□□□□ -0.74
LINC00339-211ENST00000641009 BORCS5Q969J3 196 aa10.45□□□□□ -0.74
LINC00339-211ENST00000641009 SRSF8Q9BRL6 282 aaKnown RBP10.45□□□□□ -0.74
LINC00339-211ENST00000641009 FXYD6Q9H0Q3 95 aa10.45□□□□□ -0.74
LINC00339-211ENST00000641009 TEX50A0A1B0GTY4 177 aa10.44□□□□□ -0.74
LINC00339-211ENST00000641009 EIF4EP06730 217 aaKnown RBP10.44□□□□□ -0.74
LINC00339-211ENST00000641009 FGF2P09038 288 aa10.44□□□□□ -0.74
LINC00339-211ENST00000641009 TRAPPC2P0DI81 140 aa10.44□□□□□ -0.74
LINC00339-211ENST00000641009 TRAPPC2BP0DI82 140 aa10.44□□□□□ -0.74
LINC00339-211ENST00000641009 OR13C7P0DN81 318 aa10.44□□□□□ -0.74
LINC00339-211ENST00000641009 PRSS3P35030 304 aa10.44□□□□□ -0.74
LINC00339-211ENST00000641009 TAS2R46P59540 309 aa10.44□□□□□ -0.74
LINC00339-211ENST00000641009 WT1-ASQ06250 92 aa10.44□□□□□ -0.74
LINC00339-211ENST00000641009 GDPD1Q8N9F7 314 aa10.44□□□□□ -0.74
LINC00339-211ENST00000641009 VCX3AQ9NNX9 186 aa10.44□□□□□ -0.74
LINC00339-211ENST00000641009 THYN1Q9P016 225 aa10.44□□□□□ -0.74
LINC00339-211ENST00000641009 NSG2Q9Y328 171 aa10.44□□□□□ -0.74
LINC00339-211ENST00000641009 HYDINQ4G0P3 5121 aa10.44□□□□□ -0.74
LINC00339-211ENST00000641009 A0A087WXM4 84 aa10.43□□□□□ -0.74
LINC00339-211ENST00000641009 KRASP01116 189 aa10.43□□□□□ -0.74
LINC00339-211ENST00000641009 SERPINE2P07093 398 aa10.43□□□□□ -0.74
LINC00339-211ENST00000641009 PTBP1P26599 531 aaKnown RBP eCLIP10.43□□□□□ -0.74
LINC00339-211ENST00000641009 HLA-DMAP28067 261 aa10.43□□□□□ -0.74
LINC00339-211ENST00000641009 HRH1P35367 487 aa10.43□□□□□ -0.74
LINC00339-211ENST00000641009 G6PCP35575 357 aa10.43□□□□□ -0.74
LINC00339-211ENST00000641009 LPAR6P43657 344 aa10.43□□□□□ -0.74
LINC00339-211ENST00000641009 ZNF585BQ52M93 769 aa10.43□□□□□ -0.74
LINC00339-211ENST00000641009 PLET1Q6UQ28 207 aa10.43□□□□□ -0.74
LINC00339-211ENST00000641009 SLC16A13Q7RTY0 426 aa10.43□□□□□ -0.74
LINC00339-211ENST00000641009 LYSMD2Q8IV50 215 aa10.43□□□□□ -0.74
LINC00339-211ENST00000641009 OR52B4Q8NGK2 314 aa10.43□□□□□ -0.74
LINC00339-211ENST00000641009 OR1L8Q8NGR8 309 aa10.43□□□□□ -0.74
LINC00339-211ENST00000641009 SLC25A46Q96AG3 418 aa10.43□□□□□ -0.74
LINC00339-211ENST00000641009 DGCR14Q96DF8 476 aaKnown RBP10.43□□□□□ -0.74
LINC00339-211ENST00000641009 HINT2Q9BX68 163 aa10.43□□□□□ -0.74
LINC00339-211ENST00000641009 IGHV3-21A0A0B4J1V1 117 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 OR2T8A6NH00 312 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 GPR31O00270 319 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 TGOLN2O43493 480 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 TNFAIP8O95379 198 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 MFAP2P55001 183 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 NCS1P62166 190 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 PHLDA2Q53GA4 152 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 THOC7Q6I9Y2 204 aaKnown RBP10.42□□□□□ -0.74
LINC00339-211ENST00000641009 SLC25A24Q6NUK1 477 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 CMTM1Q8IZ96 169 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 OR6F1Q8NGZ6 308 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 VN1R17PQ8TDU5 208 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 NDUFA4L2Q9NRX3 87 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 COMMD3Q9UBI1 195 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 CYB5BO43169 146 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 C8orf88P0DMB2 117 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 HSD17B13Q7Z5P4 300 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-211ENST00000641009 GPX8Q8TED1 209 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 LSM10Q969L4 123 aaKnown RBP10.42□□□□□ -0.74
LINC00339-211ENST00000641009 FUNDC2Q9BWH2 189 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 ZNF436Q9C0F3 470 aaPredicted RBP10.42□□□□□ -0.74
LINC00339-211ENST00000641009 UFC1Q9Y3C8 167 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 OR51B2Q9Y5P1 312 aa10.42□□□□□ -0.74
LINC00339-211ENST00000641009 F11RQ9Y624 299 aaKnown RBP10.42□□□□□ -0.74
LINC00339-211ENST00000641009 PLECQ15149 4684 aaKnown RBP10.42□□□□□ -0.74
LINC00339-211ENST00000641009 DBX1A6NMT0 343 aa10.41□□□□□ -0.74
LINC00339-211ENST00000641009 SNAPC5O75971 98 aa10.41□□□□□ -0.74
LINC00339-211ENST00000641009 VBP1P61758 197 aa10.41□□□□□ -0.74
LINC00339-211ENST00000641009 TSPAN5P62079 268 aa10.41□□□□□ -0.74
LINC00339-211ENST00000641009 SNX29P2Q8IUI4 249 aa10.41□□□□□ -0.74
LINC00339-211ENST00000641009 MARC2Q969Z3 335 aa10.41□□□□□ -0.74
LINC00339-211ENST00000641009 MRPL27Q9P0M9 148 aaKnown RBP10.41□□□□□ -0.74
LINC00339-211ENST00000641009 EPPK1P58107 5090 aaKnown RBP10.4□□□□□ -0.74
LINC00339-211ENST00000641009 APOA1P02647 267 aa10.4□□□□□ -0.74
LINC00339-211ENST00000641009 ELLP55199 621 aaPredicted RBP10.4□□□□□ -0.74
LINC00339-211ENST00000641009 ANKRD55Q3KP44 614 aa10.4□□□□□ -0.74
LINC00339-211ENST00000641009 RBPMS2Q6ZRY4 209 aaKnown RBP10.4□□□□□ -0.74
LINC00339-211ENST00000641009 SCARB1Q8WTV0 552 aa10.4□□□□□ -0.74
LINC00339-211ENST00000641009 TMEM190Q8WZ59 177 aa10.4□□□□□ -0.74
LINC00339-211ENST00000641009 BSCL2Q96G97 398 aaPredicted RBP10.4□□□□□ -0.74
LINC00339-211ENST00000641009 CHRDL1Q9BU40 450 aa10.4□□□□□ -0.74
LINC00339-211ENST00000641009 IGHV3OR16-8A0A075B7F1 116 aa10.39□□□□□ -0.75
LINC00339-211ENST00000641009 TRAV25A0A0B4J276 109 aa10.39□□□□□ -0.75
LINC00339-211ENST00000641009 SMIM31A0A1B0GVY4 71 aa10.39□□□□□ -0.75
LINC00339-211ENST00000641009 F8W735 103 aaPredicted RBP10.39□□□□□ -0.75
LINC00339-211ENST00000641009 HPGDSO60760 199 aa10.39□□□□□ -0.75
LINC00339-211ENST00000641009 ELK1P19419 428 aa10.39□□□□□ -0.75
LINC00339-211ENST00000641009 TBC1D26Q86UD7 250 aa10.39□□□□□ -0.75
LINC00339-211ENST00000641009 CADM3Q8N126 398 aa10.39□□□□□ -0.75
LINC00339-211ENST00000641009 UBAC2Q8NBM4 344 aa10.39□□□□□ -0.75
LINC00339-211ENST00000641009 OR1L6Q8NGR2 347 aa10.39□□□□□ -0.75
LINC00339-211ENST00000641009 GGTLC1Q9BX51 225 aa10.39□□□□□ -0.75
LINC00339-211ENST00000641009 TMEM14BQ9NUH8 114 aa10.39□□□□□ -0.75
LINC00339-211ENST00000641009 C21orf62Q9NYP8 219 aa10.39□□□□□ -0.75
LINC00339-211ENST00000641009 PRNDQ9UKY0 176 aa10.39□□□□□ -0.75
LINC00339-211ENST00000641009 ALMS1Q8TCU4 4167 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms