RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 SSNA1O43805 119 aa7.17□□□□□ -1.26
SCARB2-225ENST00000640900 CRYGCP07315 174 aa7.17□□□□□ -1.26
SCARB2-225ENST00000640900 PPIFP30405 207 aaKnown RBP7.17□□□□□ -1.26
SCARB2-225ENST00000640900 FXYD3Q14802 87 aa7.17□□□□□ -1.26
SCARB2-225ENST00000640900 IAH1Q2TAA2 248 aaPredicted RBP7.17□□□□□ -1.26
SCARB2-225ENST00000640900 AKIRIN2Q53H80 203 aa7.17□□□□□ -1.26
SCARB2-225ENST00000640900 GSG1LQ6UXU4 331 aa7.17□□□□□ -1.26
SCARB2-225ENST00000640900 PRIMA1Q86XR5 153 aa7.17□□□□□ -1.26
SCARB2-225ENST00000640900 LURAP1LQ8IV03 231 aa7.17□□□□□ -1.26
SCARB2-225ENST00000640900 OR4A16Q8NH70 328 aa7.17□□□□□ -1.26
SCARB2-225ENST00000640900 ARPC1AQ92747 370 aa7.17□□□□□ -1.26
SCARB2-225ENST00000640900 WDR89Q96FK6 387 aaPredicted RBP7.17□□□□□ -1.26
SCARB2-225ENST00000640900 TMEM68Q96MH6 324 aa7.17□□□□□ -1.26
SCARB2-225ENST00000640900 PRSS22Q9GZN4 317 aa7.17□□□□□ -1.26
SCARB2-225ENST00000640900 OR51B2Q9Y5P1 312 aa7.17□□□□□ -1.26
SCARB2-225ENST00000640900 GOSR2O14653 212 aa7.16□□□□□ -1.26
SCARB2-225ENST00000640900 ATP6V0E1O15342 81 aa7.16□□□□□ -1.26
SCARB2-225ENST00000640900 SIX6O95475 246 aa7.16□□□□□ -1.26
SCARB2-225ENST00000640900 MBPP02686 304 aaPredicted RBP7.16□□□□□ -1.26
SCARB2-225ENST00000640900 GIPP09681 153 aaPredicted RBP7.16□□□□□ -1.26
SCARB2-225ENST00000640900 RPL27AP46776 148 aaKnown RBP7.16□□□□□ -1.26
SCARB2-225ENST00000640900 PAX9P55771 341 aa7.16□□□□□ -1.26
SCARB2-225ENST00000640900 CYCSP99999 105 aaKnown RBP7.16□□□□□ -1.26
SCARB2-225ENST00000640900 WT1-ASQ06250 92 aa7.16□□□□□ -1.26
SCARB2-225ENST00000640900 PLGLAQ15195 96 aa7.16□□□□□ -1.26
SCARB2-225ENST00000640900 TNXAQ16473 311 aa7.16□□□□□ -1.26
SCARB2-225ENST00000640900 HSD17B13Q7Z5P4 300 aaPredicted RBP7.16□□□□□ -1.26
SCARB2-225ENST00000640900 SLC35E3Q7Z769 313 aa7.16□□□□□ -1.26
SCARB2-225ENST00000640900 TTC9CQ8N5M4 171 aa7.16□□□□□ -1.26
SCARB2-225ENST00000640900 RNF152Q8N8N0 203 aa7.16□□□□□ -1.26
SCARB2-225ENST00000640900 UXS1Q8NBZ7 420 aa7.16□□□□□ -1.26
SCARB2-225ENST00000640900 ZNF114Q8NC26 417 aa7.16□□□□□ -1.26
SCARB2-225ENST00000640900 CLCC1Q96S66 551 aa7.16□□□□□ -1.26
SCARB2-225ENST00000640900 ZNF436Q9C0F3 470 aaPredicted RBP7.16□□□□□ -1.26
SCARB2-225ENST00000640900 COMMD5Q9GZQ3 224 aa7.16□□□□□ -1.26
SCARB2-225ENST00000640900 TNFRSF19Q9NS68 423 aa7.16□□□□□ -1.26
SCARB2-225ENST00000640900 RCL1Q9Y2P8 373 aaKnown RBP7.16□□□□□ -1.26
SCARB2-225ENST00000640900 MSGN1A6NI15 193 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 NPIPB5A8MRT5 1133 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 H0YIZ8 118 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 AP4M1O00189 453 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 LY86O95711 162 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 TMEM50AO95807 157 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 IGLV1-40P01703 118 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 HKR1P10072 659 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 LYL1P12980 280 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 CTRB1P17538 263 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 NKX2-1P43699 371 aaPredicted RBP7.15□□□□□ -1.26
SCARB2-225ENST00000640900 BCAP31P51572 246 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 TAS2R30P59541 319 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 RAP2BP61225 183 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 CTRB2Q6GPI1 263 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 STPG2Q8N412 459 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 OR2C3Q8N628 320 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 OR10W1Q8NGF6 305 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 OR1S1Q8NH92 325 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 RNASE11Q8TAA1 199 aaKnown RBP7.15□□□□□ -1.26
SCARB2-225ENST00000640900 TMEM170AQ8WVE7 144 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 ST6GAL2Q96JF0 529 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 RNF126Q9BV68 326 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 DMRT1Q9Y5R6 373 aa7.15□□□□□ -1.26
SCARB2-225ENST00000640900 TENM1Q9UKZ4 2725 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 TRAV14DV4A0A0A6YYC5 116 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 C13orf42A0A1B0GVH6 325 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 A0A1W2PN81 502 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 TMEM89A2RUT3 159 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 C5orf51A6NDU8 294 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 K7EPK0 472 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 SYNGR2O43760 224 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 SOX15O60248 233 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 ACTL6BO94805 426 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 CNIH1O95406 144 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 AREGP15514 252 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 CHRNA7P36544 502 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 ATP5IP56385 69 aaPredicted RBP7.14□□□□□ -1.27
SCARB2-225ENST00000640900 POLR2GP62487 172 aaKnown RBP eCLIP7.14□□□□□ -1.27
SCARB2-225ENST00000640900 RAB32Q13637 225 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 LINC01006Q8NI28 216 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 FAM110DQ8TAY7 271 aaPredicted RBP7.14□□□□□ -1.27
SCARB2-225ENST00000640900 MYOZ3Q8TDC0 251 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 PPP1R1CQ8WVI7 109 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 SMIM8Q96KF7 97 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 RAB40CQ96S21 281 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 FAM103A1Q9BTL3 118 aaKnown RBP7.14□□□□□ -1.27
SCARB2-225ENST00000640900 RBKSQ9H477 322 aa7.14□□□□□ -1.27
SCARB2-225ENST00000640900 ANK2Q01484 3957 aa7.13□□□□□ -1.27
SCARB2-225ENST00000640900 TRBV9A0A0B4J1U6 114 aa7.13□□□□□ -1.27
SCARB2-225ENST00000640900 TRAV41A0A0B4J266 112 aa7.13□□□□□ -1.27
SCARB2-225ENST00000640900 FAM25EA8MYX2 175 aa7.13□□□□□ -1.27
SCARB2-225ENST00000640900 G3V318 75 aa7.13□□□□□ -1.27
SCARB2-225ENST00000640900 H3BUA1 57 aa7.13□□□□□ -1.27
SCARB2-225ENST00000640900 FBXO24O75426 580 aa7.13□□□□□ -1.27
SCARB2-225ENST00000640900 MED6O75586 246 aa7.13□□□□□ -1.27
SCARB2-225ENST00000640900 DEDDO75618 318 aa7.13□□□□□ -1.27
SCARB2-225ENST00000640900 MPC2O95563 127 aa7.13□□□□□ -1.27
SCARB2-225ENST00000640900 IFNA17P01571 189 aa7.13□□□□□ -1.27
SCARB2-225ENST00000640900 IGHG4P01861 327 aa7.13□□□□□ -1.27
SCARB2-225ENST00000640900 OPN1MWP04001 364 aa7.13□□□□□ -1.27
SCARB2-225ENST00000640900 OPN1MW2P0DN77 364 aa7.13□□□□□ -1.27
SCARB2-225ENST00000640900 OPN1MW3P0DN78 364 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms