RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 RAB1CQ92928 201 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 NPVFQ9HCQ7 196 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 ENY2Q9NPA8 101 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 KAAG1Q9UBP8 84 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 ZNF257Q9Y2Q1 563 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 OR51B2Q9Y5P1 312 aa12.29□□□□□ -0.44
TRIM3-215ENST00000639856 MYO18BQ8IUG5 2567 aa12.28□□□□□ -0.44
TRIM3-215ENST00000639856 MALRD1Q5VYJ5 2156 aa12.28□□□□□ -0.44
TRIM3-215ENST00000639856 C5orf52A6NGY3 159 aa12.28□□□□□ -0.44
TRIM3-215ENST00000639856 PRB1P04280 392 aa12.28□□□□□ -0.44
TRIM3-215ENST00000639856 S100A6P06703 90 aa12.28□□□□□ -0.44
TRIM3-215ENST00000639856 ZNF343Q6P1L6 599 aa12.28□□□□□ -0.44
TRIM3-215ENST00000639856 Q8WTZ3 238 aa12.28□□□□□ -0.44
TRIM3-215ENST00000639856 MGST2Q99735 147 aa12.28□□□□□ -0.44
TRIM3-215ENST00000639856 SMIM7Q9BQ49 75 aa12.28□□□□□ -0.44
TRIM3-215ENST00000639856 GGTLC1Q9BX51 225 aa12.28□□□□□ -0.44
TRIM3-215ENST00000639856 TMEM242Q9NWH2 141 aa12.28□□□□□ -0.44
TRIM3-215ENST00000639856 SRRM4A7MD48 611 aaKnown RBP12.28□□□□□ -0.44
TRIM3-215ENST00000639856 UPK2O00526 184 aa12.28□□□□□ -0.44
TRIM3-215ENST00000639856 TMEM249Q2WGJ8 235 aa12.28□□□□□ -0.44
TRIM3-215ENST00000639856 GCSAMLQ5JQS6 135 aa12.28□□□□□ -0.44
TRIM3-215ENST00000639856 GATAD1Q8WUU5 269 aa12.28□□□□□ -0.44
TRIM3-215ENST00000639856 LSM4Q9Y4Z0 139 aaKnown RBP12.28□□□□□ -0.44
TRIM3-215ENST00000639856 COL12A1Q99715 3063 aa12.27□□□□□ -0.44
TRIM3-215ENST00000639856 A0A1W2PPV4 95 aa12.27□□□□□ -0.45
TRIM3-215ENST00000639856 J3QR06 171 aa12.27□□□□□ -0.45
TRIM3-215ENST00000639856 KBTBD11O94819 623 aa12.27□□□□□ -0.45
TRIM3-215ENST00000639856 YIF1AO95070 293 aa12.27□□□□□ -0.45
TRIM3-215ENST00000639856 IGHV2-70P01814 119 aa12.27□□□□□ -0.45
TRIM3-215ENST00000639856 MYOD1P15172 320 aa12.27□□□□□ -0.45
TRIM3-215ENST00000639856 ARSJQ5FYB0 599 aaPredicted RBP12.27□□□□□ -0.45
TRIM3-215ENST00000639856 CYP2G1PQ6ZSU1 146 aa12.27□□□□□ -0.45
TRIM3-215ENST00000639856 NAT8Q9UHE5 227 aa12.27□□□□□ -0.45
TRIM3-215ENST00000639856 URGCP-MRPS24S4R325 110 aa12.27□□□□□ -0.45
TRIM3-215ENST00000639856 PAGE4O60829 102 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 CA2P00918 260 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 CXCL1P09341 107 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 B2MP61769 119 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 PRCDQ00LT1 54 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 OR4F5Q8NH21 305 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 OSR1Q8TAX0 266 aaPredicted RBP12.26□□□□□ -0.45
TRIM3-215ENST00000639856 C1orf159Q96HA4 380 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 BBC3Q96PG8 261 aaPredicted RBP12.26□□□□□ -0.45
TRIM3-215ENST00000639856 OR4F4Q96R69 305 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 HINT2Q9BX68 163 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 MRPL20Q9BYC9 149 aaKnown RBP12.26□□□□□ -0.45
TRIM3-215ENST00000639856 RAB1BQ9H0U4 201 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 BET1LQ9NYM9 111 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 PXMP4Q9Y6I8 212 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 TNCP24821 2201 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 DOPEY1Q5JWR5 2465 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 ZNF462Q96JM2 2506 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 CLDN34H7C241 214 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 RPS10P46783 165 aaKnown RBP12.26□□□□□ -0.45
TRIM3-215ENST00000639856 PARLQ9H300 379 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 PLEKHA3Q9HB20 300 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 PATZ1Q9HBE1 687 aaKnown RBP12.26□□□□□ -0.45
TRIM3-215ENST00000639856 KCNIP2Q9NS61 270 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 FKBP11Q9NYL4 201 aa12.26□□□□□ -0.45
TRIM3-215ENST00000639856 UBE2CO00762 179 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 APOA2P02652 100 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 SAA1P0DJI8 122 aaPredicted RBP12.25□□□□□ -0.45
TRIM3-215ENST00000639856 RND2P52198 227 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 TMEM241Q24JQ0 296 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 ZNF674Q2M3X9 581 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 MIC13Q5XKP0 118 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 TEPPQ6URK8 271 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 DTX2Q86UW9 622 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 OR5AN1Q8NGI8 311 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 RPUSD4Q96CM3 377 aaKnown RBP12.25□□□□□ -0.45
TRIM3-215ENST00000639856 TACC2O95359 2948 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 FNDC10F2Z333 226 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 H0YJW9 148 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 IGFBP2P18065 325 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 DLX6P56179 175 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 C8orf31Q8N9H6 132 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 ZNF596Q8TC21 504 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 CTDSP1Q9GZU7 261 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 UBTD1Q9HAC8 227 aa12.25□□□□□ -0.45
TRIM3-215ENST00000639856 TGIF2-C20orf24A0A0A6YYL0 155 aa12.24□□□□□ -0.45
TRIM3-215ENST00000639856 TEX50A0A1B0GTY4 177 aa12.24□□□□□ -0.45
TRIM3-215ENST00000639856 IGHV2-5P01817 119 aa12.24□□□□□ -0.45
TRIM3-215ENST00000639856 CDKN1AP38936 164 aa12.24□□□□□ -0.45
TRIM3-215ENST00000639856 TMEM155Q4W5P6 130 aa12.24□□□□□ -0.45
TRIM3-215ENST00000639856 FAM71F2Q6NXP2 309 aa12.24□□□□□ -0.45
TRIM3-215ENST00000639856 ZNF841Q6ZN19 808 aa12.24□□□□□ -0.45
TRIM3-215ENST00000639856 LINC00311Q8N616 119 aa12.24□□□□□ -0.45
TRIM3-215ENST00000639856 OR5B3Q8NH48 314 aa12.24□□□□□ -0.45
TRIM3-215ENST00000639856 NEIL1Q96FI4 390 aaPredicted RBP12.24□□□□□ -0.45
TRIM3-215ENST00000639856 HARBI1Q96MB7 349 aa12.24□□□□□ -0.45
TRIM3-215ENST00000639856 C11orf94C9JXX5 98 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 OPN1MWP04001 364 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 RNF224P0DH78 156 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 OPN1MW2P0DN77 364 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 OPN1MW3P0DN78 364 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 ADIRFQ15847 76 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 TMEM177Q53S58 311 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 OR10X1Q8NGY0 326 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 TMEM186Q96B77 213 aa12.23□□□□□ -0.45
TRIM3-215ENST00000639856 METTL1Q9UBP6 276 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms