RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 LEPROTO15243 131 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 UNC119Q13432 240 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 FGFRL1Q8N441 504 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 SMIM8Q96KF7 97 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 SPTY2D1-AS1A0A0U1RR47 76 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 CCL8P80075 99 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 C2orf68Q2NKX9 166 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 MYF5P13349 255 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 TMEM240Q5SV17 173 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 GPR132Q9UNW8 380 aa11.25□□□□□ -0.61
UBE3A-228ENST00000638155 MPV17P39210 176 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 LRP6O75581 1613 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 ATP5J2P56134 94 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 SELENOHQ8IZQ5 122 aaKnown RBP11.24□□□□□ -0.61
UBE3A-228ENST00000638155 OR52E5Q8NH55 327 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 GTF3AQ92664 365 aaKnown RBP11.24□□□□□ -0.61
UBE3A-228ENST00000638155 GDF15Q99988 308 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 A0A0G2JLM5 398 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 TMEM258P61165 79 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 ZNHIT1O43257 154 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 OR2H2O95918 312 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 ZNF79Q15937 498 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 LY6EQ16553 131 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 NRN1Q9NPD7 142 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 ANAPC10Q9UM13 185 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 C21orf140B9A014 251 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 PAX4O43316 350 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 NCR2O95944 276 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 C1orf122Q6ZSJ8 110 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 MOSP00540 346 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 GZMBP10144 247 aa11.24□□□□□ -0.61
UBE3A-228ENST00000638155 ZNF385AQ96PM9 386 aaKnown RBP11.24□□□□□ -0.61
UBE3A-228ENST00000638155 APCDD1LQ8NCL9 501 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 IGHV5-51A0A0C4DH38 117 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 A0A1W2PQD3 144 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 NDUFA2O43678 99 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 CT55Q8WUE5 264 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 ALS2Q96Q42 1657 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 CT83Q5H943 113 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 DTX1Q86Y01 620 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 CLEC7AQ9BXN2 247 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 MRPS18BQ9Y676 258 aaKnown RBP11.23□□□□□ -0.61
UBE3A-228ENST00000638155 SPTAN1Q13813 2472 aaKnown RBP11.23□□□□□ -0.61
UBE3A-228ENST00000638155 TRACP01848 142 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 P2RY6Q15077 328 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 CYP2G1PQ6ZSU1 146 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 NDUFAF3Q9BU61 184 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 IDI2-AS1Q9NZ38 188 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 TRAV41A0A0B4J266 112 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 PGLYRP1O75594 196 aaPredicted RBP11.23□□□□□ -0.61
UBE3A-228ENST00000638155 SCTP09683 121 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 SHISA4Q96DD7 197 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 C3AR1Q16581 482 aa11.23□□□□□ -0.61
UBE3A-228ENST00000638155 CD7P09564 240 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 NPC2P61916 151 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 TMEM30BQ3MIR4 351 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 TEX45Q8NA69 505 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 IMMP2LQ96T52 175 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 IGKV1D-42A0A075B6H8 117 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 IGHV3-64A0A075B6Q5 118 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 A0A087WWC5 75 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 MUC21A0A0G2JKD1 596 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 MUC21A0A140T8X8 626 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 TRGV3P03979 118 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 MUC21Q5SSG8 566 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 ATG4DQ86TL0 474 aaPredicted RBP11.22□□□□□ -0.61
UBE3A-228ENST00000638155 ADARB2-AS1A8MUL3 147 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 PNKDQ8N490 385 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 ZG16O60844 167 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 IL6RP08887 468 aaPredicted RBP11.22□□□□□ -0.61
UBE3A-228ENST00000638155 TPTE2P1Q5T6R2 138 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 ABHD17AQ96GS6 310 aa11.22□□□□□ -0.61
UBE3A-228ENST00000638155 PLA2G10O15496 165 aa11.21□□□□□ -0.61
UBE3A-228ENST00000638155 SERF1AO75920 110 aa11.21□□□□□ -0.61
UBE3A-228ENST00000638155 RBM38Q9H0Z9 239 aaKnown RBP11.21□□□□□ -0.61
UBE3A-228ENST00000638155 DDX60LQ5H9U9 1706 aaKnown RBP11.21□□□□□ -0.61
UBE3A-228ENST00000638155 IGHV3-66A0A0C4DH42 116 aa11.21□□□□□ -0.61
UBE3A-228ENST00000638155 LINC01559Q495D7 138 aa11.21□□□□□ -0.61
UBE3A-228ENST00000638155 GATAD1Q8WUU5 269 aa11.21□□□□□ -0.61
UBE3A-228ENST00000638155 SPANXDQ9BXN6 97 aa11.21□□□□□ -0.61
UBE3A-228ENST00000638155 PLXNA1Q9UIW2 1896 aa11.21□□□□□ -0.61
UBE3A-228ENST00000638155 HS3ST3B1Q9Y662 390 aa11.21□□□□□ -0.61
UBE3A-228ENST00000638155 NTN1O95631 604 aa11.21□□□□□ -0.62
UBE3A-228ENST00000638155 TPRX1Q8N7U7 411 aa11.21□□□□□ -0.62
UBE3A-228ENST00000638155 RASL10BQ96S79 203 aa11.21□□□□□ -0.62
UBE3A-228ENST00000638155 PEAR1Q5VY43 1037 aaPredicted RBP11.21□□□□□ -0.62
UBE3A-228ENST00000638155 CBLN3Q6UW01 205 aa11.21□□□□□ -0.62
UBE3A-228ENST00000638155 FGF11Q92914 225 aa11.21□□□□□ -0.62
UBE3A-228ENST00000638155 KCNK17Q96T54 332 aa11.21□□□□□ -0.62
UBE3A-228ENST00000638155 ABCA3Q99758 1704 aa11.21□□□□□ -0.62
UBE3A-228ENST00000638155 CHCHD1Q96BP2 118 aaKnown RBP11.21□□□□□ -0.62
UBE3A-228ENST00000638155 PLCH1Q4KWH8 1693 aa11.2□□□□□ -0.62
UBE3A-228ENST00000638155 NBEAP1P0C6P0 100 aa11.2□□□□□ -0.62
UBE3A-228ENST00000638155 SCN7AQ01118 1682 aa11.2□□□□□ -0.62
UBE3A-228ENST00000638155 LAGE3Q14657 143 aa11.2□□□□□ -0.62
UBE3A-228ENST00000638155 PKD1L3Q7Z443 1732 aa11.2□□□□□ -0.62
UBE3A-228ENST00000638155 PROB1E7EW31 1015 aa11.2□□□□□ -0.62
UBE3A-228ENST00000638155 H3BMM0 161 aa11.2□□□□□ -0.62
UBE3A-228ENST00000638155 LHX9Q9NQ69 397 aa11.2□□□□□ -0.62
UBE3A-228ENST00000638155 INAFM2P0DMQ5 153 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms