RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 SULT1A4P0DMN0 295 aa12.53□□□□□ -0.4
CLN6-216ENST00000636876 HSPE1P61604 102 aaKnown RBP12.53□□□□□ -0.4
CLN6-216ENST00000636876 AARDQ4LEZ3 155 aa12.53□□□□□ -0.4
CLN6-216ENST00000636876 THOC7Q6I9Y2 204 aaKnown RBP12.53□□□□□ -0.4
CLN6-216ENST00000636876 ZNF429Q86V71 674 aa12.53□□□□□ -0.4
CLN6-216ENST00000636876 COMMD1Q8N668 190 aa12.53□□□□□ -0.4
CLN6-216ENST00000636876 C3orf56Q8N813 242 aa12.53□□□□□ -0.4
CLN6-216ENST00000636876 SRSF8Q9BRL6 282 aaKnown RBP12.53□□□□□ -0.4
CLN6-216ENST00000636876 GPN1Q9HCN4 374 aaPredicted RBP12.53□□□□□ -0.4
CLN6-216ENST00000636876 NDUFA4L2Q9NRX3 87 aa12.53□□□□□ -0.4
CLN6-216ENST00000636876 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.53□□□□□ -0.4
CLN6-216ENST00000636876 TMED3Q9Y3Q3 217 aa12.53□□□□□ -0.4
CLN6-216ENST00000636876 A0A1W2PN81 502 aa12.52□□□□□ -0.41
CLN6-216ENST00000636876 ST8SIA3O43173 380 aa12.52□□□□□ -0.41
CLN6-216ENST00000636876 SOX15O60248 233 aa12.52□□□□□ -0.41
CLN6-216ENST00000636876 FBXO24O75426 580 aa12.52□□□□□ -0.41
CLN6-216ENST00000636876 IGLV1-40P01703 118 aa12.52□□□□□ -0.41
CLN6-216ENST00000636876 CD28P10747 220 aa12.52□□□□□ -0.41
CLN6-216ENST00000636876 CHRNA7P36544 502 aa12.52□□□□□ -0.41
CLN6-216ENST00000636876 SRSF4Q08170 494 aaKnown RBP12.52□□□□□ -0.41
CLN6-216ENST00000636876 FOXE3Q13461 319 aa12.52□□□□□ -0.41
CLN6-216ENST00000636876 SMCO1Q147U7 214 aa12.52□□□□□ -0.41
CLN6-216ENST00000636876 GGNBP1Q5YKI7 109 aa12.52□□□□□ -0.41
CLN6-216ENST00000636876 TEX38Q6PEX7 206 aa12.52□□□□□ -0.41
CLN6-216ENST00000636876 C12orf45Q8N5I9 185 aaPredicted RBP12.52□□□□□ -0.41
CLN6-216ENST00000636876 OR5T1Q8NG75 326 aa12.52□□□□□ -0.41
CLN6-216ENST00000636876 OR4X2Q8NGF9 303 aa12.52□□□□□ -0.41
CLN6-216ENST00000636876 FAM110DQ8TAY7 271 aaPredicted RBP12.52□□□□□ -0.41
CLN6-216ENST00000636876 HINT2Q9BX68 163 aa12.52□□□□□ -0.41
CLN6-216ENST00000636876 COA4Q9NYJ1 87 aa12.52□□□□□ -0.41
CLN6-216ENST00000636876 A0A1B0GU03 582 aa12.51□□□□□ -0.41
CLN6-216ENST00000636876 IGLC7A0M8Q6 106 aa12.51□□□□□ -0.41
CLN6-216ENST00000636876 SNRPGP15A8MWD9 76 aa12.51□□□□□ -0.41
CLN6-216ENST00000636876 ADAP1O75689 374 aa12.51□□□□□ -0.41
CLN6-216ENST00000636876 IFNA21P01568 189 aa12.51□□□□□ -0.41
CLN6-216ENST00000636876 ELANEP08246 267 aa12.51□□□□□ -0.41
CLN6-216ENST00000636876 SLC25A6P12236 298 aa12.51□□□□□ -0.41
CLN6-216ENST00000636876 AREGP15514 252 aa12.51□□□□□ -0.41
CLN6-216ENST00000636876 PRCDQ00LT1 54 aa12.51□□□□□ -0.41
CLN6-216ENST00000636876 TCTEX1D4Q5JR98 221 aa12.51□□□□□ -0.41
CLN6-216ENST00000636876 C11orf44Q8N8P7 122 aa12.51□□□□□ -0.41
CLN6-216ENST00000636876 OR10W1Q8NGF6 305 aa12.51□□□□□ -0.41
CLN6-216ENST00000636876 OR5M8Q8NGP6 311 aa12.51□□□□□ -0.41
CLN6-216ENST00000636876 CITED1Q99966 193 aa12.51□□□□□ -0.41
CLN6-216ENST00000636876 IFNA17P01571 189 aa12.5□□□□□ -0.41
CLN6-216ENST00000636876 PSMB8P28062 276 aa12.5□□□□□ -0.41
CLN6-216ENST00000636876 CD83Q01151 205 aa12.5□□□□□ -0.41
CLN6-216ENST00000636876 CXorf66Q5JRM2 361 aaPredicted RBP12.5□□□□□ -0.41
CLN6-216ENST00000636876 HSD17B13Q7Z5P4 300 aaPredicted RBP12.5□□□□□ -0.41
CLN6-216ENST00000636876 TTC9CQ8N5M4 171 aa12.5□□□□□ -0.41
CLN6-216ENST00000636876 RNF152Q8N8N0 203 aa12.5□□□□□ -0.41
CLN6-216ENST00000636876 UXS1Q8NBZ7 420 aa12.5□□□□□ -0.41
CLN6-216ENST00000636876 PDCD10Q9BUL8 212 aa12.5□□□□□ -0.41
CLN6-216ENST00000636876 NPIPB5A8MRT5 1133 aa12.49□□□□□ -0.41
CLN6-216ENST00000636876 H3BUA1 57 aa12.49□□□□□ -0.41
CLN6-216ENST00000636876 PITX3O75364 302 aa12.49□□□□□ -0.41
CLN6-216ENST00000636876 PF4V1P10720 104 aa12.49□□□□□ -0.41
CLN6-216ENST00000636876 PSMB6P28072 239 aa12.49□□□□□ -0.41
CLN6-216ENST00000636876 SPCS3P61009 180 aa12.49□□□□□ -0.41
CLN6-216ENST00000636876 WT1-ASQ06250 92 aa12.49□□□□□ -0.41
CLN6-216ENST00000636876 OXA1LQ15070 435 aa12.49□□□□□ -0.41
CLN6-216ENST00000636876 SHISA2Q6UWI4 295 aa12.49□□□□□ -0.41
CLN6-216ENST00000636876 LCNL1Q6ZST4 164 aa12.49□□□□□ -0.41
CLN6-216ENST00000636876 OR52E5Q8NH55 327 aa12.49□□□□□ -0.41
CLN6-216ENST00000636876 OR1S1Q8NH92 325 aa12.49□□□□□ -0.41
CLN6-216ENST00000636876 KLK15Q9H2R5 256 aa12.49□□□□□ -0.41
CLN6-216ENST00000636876 CACFD1Q9UGQ2 172 aa12.49□□□□□ -0.41
CLN6-216ENST00000636876 TCRBV4S1A1TA0A5B7 111 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 C7orf66A4D0T2 115 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 BRI3O95415 125 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 REG1AP05451 166 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 CRYGCP07315 174 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 OR13C7P0DN81 318 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 CTRB1P17538 263 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 TATDN3Q17R31 274 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 PDLIM3Q53GG5 364 aaPredicted RBP12.48□□□□□ -0.41
CLN6-216ENST00000636876 SPINK9Q5DT21 86 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 HIST2H2BDQ6DRA6 164 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 CTRB2Q6GPI1 263 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 TMEM65Q6PI78 240 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 C19orf35Q6ZS72 473 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 MRPL41Q8IXM3 137 aaKnown RBP12.48□□□□□ -0.41
CLN6-216ENST00000636876 MYOZ3Q8TDC0 251 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 CITED2Q99967 270 aaPredicted RBP12.48□□□□□ -0.41
CLN6-216ENST00000636876 PLEKHA3Q9HB20 300 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 ZNF355PQ9NSJ1 428 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 HSPB7Q9UBY9 170 aa12.48□□□□□ -0.41
CLN6-216ENST00000636876 MPTX1A8MV57 137 aa12.47□□□□□ -0.41
CLN6-216ENST00000636876 CCSO14618 274 aa12.47□□□□□ -0.41
CLN6-216ENST00000636876 NXPH3O95157 252 aa12.47□□□□□ -0.41
CLN6-216ENST00000636876 RPLP1P05386 114 aaKnown RBP12.47□□□□□ -0.41
CLN6-216ENST00000636876 RAB9AP51151 201 aa12.47□□□□□ -0.41
CLN6-216ENST00000636876 TNFRSF9Q07011 255 aa12.47□□□□□ -0.41
CLN6-216ENST00000636876 MS4A10Q96PG2 267 aa12.47□□□□□ -0.41
CLN6-216ENST00000636876 SLA2Q9H6Q3 261 aa12.47□□□□□ -0.41
CLN6-216ENST00000636876 VWFP04275 2813 aa12.47□□□□□ -0.41
CLN6-216ENST00000636876 FAM90A26D6RGX4 464 aa12.46□□□□□ -0.41
CLN6-216ENST00000636876 INS-IGF2F8WCM5 200 aa12.46□□□□□ -0.41
CLN6-216ENST00000636876 PRH1P02810 166 aa12.46□□□□□ -0.41
CLN6-216ENST00000636876 TRGV3P03979 118 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms