RNA–Protein interactions for RNA: ENST00000636661.1

CLCN2-215, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 4,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-215ENST00000636661 ARF6P62330 175 aa13.71□□□□□ -0.21
CLCN2-215ENST00000636661 TCF23Q7RTU1 214 aa13.71□□□□□ -0.21
CLCN2-215ENST00000636661 HIGD1AQ9Y241 93 aa13.71□□□□□ -0.21
CLCN2-215ENST00000636661 YTHDF2Q9Y5A9 579 aaKnown RBP13.71□□□□□ -0.21
CLCN2-215ENST00000636661 S4R3C0 116 aa13.71□□□□□ -0.21
CLCN2-215ENST00000636661 MED13Q9UHV7 2174 aa13.71□□□□□ -0.22
CLCN2-215ENST00000636661 A8MWL6 223 aa13.71□□□□□ -0.22
CLCN2-215ENST00000636661 CYYR1Q96J86 154 aa13.71□□□□□ -0.22
CLCN2-215ENST00000636661 C21orf62-AS1Q17RA5 79 aa13.7□□□□□ -0.22
CLCN2-215ENST00000636661 PGLYRP4Q96LB8 373 aa13.7□□□□□ -0.22
CLCN2-215ENST00000636661 GSX1Q9H4S2 264 aaPredicted RBP13.7□□□□□ -0.22
CLCN2-215ENST00000636661 TUBA4BQ9H853 241 aa13.7□□□□□ -0.22
CLCN2-215ENST00000636661 DLL1O00548 723 aa13.7□□□□□ -0.22
CLCN2-215ENST00000636661 HINT1P49773 126 aaPredicted RBP13.7□□□□□ -0.22
CLCN2-215ENST00000636661 ZNF497Q6ZNH5 498 aa13.7□□□□□ -0.22
CLCN2-215ENST00000636661 A0A0G2JRQ6 117 aa13.7□□□□□ -0.22
CLCN2-215ENST00000636661 TEX50A0A1B0GTY4 177 aa13.7□□□□□ -0.22
CLCN2-215ENST00000636661 PAFAH1B2P68402 229 aa13.7□□□□□ -0.22
CLCN2-215ENST00000636661 SPRR3Q9UBC9 169 aa13.7□□□□□ -0.22
CLCN2-215ENST00000636661 IFNL4K9M1U5 179 aa13.69□□□□□ -0.22
CLCN2-215ENST00000636661 PRB4P10163 310 aaPredicted RBP13.69□□□□□ -0.22
CLCN2-215ENST00000636661 SELENOTP62341 195 aa13.69□□□□□ -0.22
CLCN2-215ENST00000636661 WDR82Q6UXN9 313 aa13.69□□□□□ -0.22
CLCN2-215ENST00000636661 LOXL4Q96JB6 756 aa13.69□□□□□ -0.22
CLCN2-215ENST00000636661 NEU1Q99519 415 aa13.69□□□□□ -0.22
CLCN2-215ENST00000636661 CCL3L1P16619 93 aa13.69□□□□□ -0.22
CLCN2-215ENST00000636661 ERVFRD-1P60508 538 aa13.69□□□□□ -0.22
CLCN2-215ENST00000636661 C1orf174Q8IYL3 243 aa13.69□□□□□ -0.22
CLCN2-215ENST00000636661 J3QW42 95 aa13.69□□□□□ -0.22
CLCN2-215ENST00000636661 CDX4O14627 284 aaPredicted RBP13.69□□□□□ -0.22
CLCN2-215ENST00000636661 FOXF2Q12947 444 aa13.69□□□□□ -0.22
CLCN2-215ENST00000636661 TMEM177Q53S58 311 aa13.69□□□□□ -0.22
CLCN2-215ENST00000636661 C20orf204Q6ZNR8 217 aa13.69□□□□□ -0.22
CLCN2-215ENST00000636661 RPLP1P05386 114 aaKnown RBP13.69□□□□□ -0.22
CLCN2-215ENST00000636661 HEPN1Q6WQI6 88 aa13.69□□□□□ -0.22
CLCN2-215ENST00000636661 MIR17HGQ75NE6 70 aa13.69□□□□□ -0.22
CLCN2-215ENST00000636661 OR4C13Q8NGP0 309 aa13.69□□□□□ -0.22
CLCN2-215ENST00000636661 WIPF3A6NGB9 483 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 CGB1A6NKQ9 187 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 F5H697 171 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 MT-ND6P03923 174 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 LGALS7P47929 136 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 GFRA1P56159 465 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 RPL30P62888 115 aaKnown RBP13.68□□□□□ -0.22
CLCN2-215ENST00000636661 NMSQ5H8A3 153 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 Q6ZRM9 215 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 RPP25LQ8N5L8 163 aaKnown RBP13.68□□□□□ -0.22
CLCN2-215ENST00000636661 ATG101Q9BSB4 218 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 LIME1Q9H400 295 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 IQCF6A8MYZ5 107 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 IGKV1-5P01602 117 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 MC5RP33032 325 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 RIGQ13278 110 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 ASCL5Q7RTU5 278 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 GBGT1Q8N5D6 347 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 MAP1LC3CQ9BXW4 147 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 TCF21O43680 179 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 HLA-DQA1P01909 254 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 MST1LQ2TV78 715 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 AUP1Q9Y679 476 aa13.68□□□□□ -0.22
CLCN2-215ENST00000636661 IL18BPO95998 194 aa13.67□□□□□ -0.22
CLCN2-215ENST00000636661 FCGR2BP31994 310 aaPredicted RBP13.67□□□□□ -0.22
CLCN2-215ENST00000636661 RELBQ01201 579 aa13.67□□□□□ -0.22
CLCN2-215ENST00000636661 PIEZO2Q9H5I5 2752 aa13.67□□□□□ -0.22
CLCN2-215ENST00000636661 A0A087WWC5 75 aa13.67□□□□□ -0.22
CLCN2-215ENST00000636661 SPATA45Q537H7 98 aa13.67□□□□□ -0.22
CLCN2-215ENST00000636661 PLXNB3Q9ULL4 1909 aa13.67□□□□□ -0.22
CLCN2-215ENST00000636661 ZNF729A6NN14 1252 aaPredicted RBP13.67□□□□□ -0.22
CLCN2-215ENST00000636661 CYB5R2Q6BCY4 276 aa13.67□□□□□ -0.22
CLCN2-215ENST00000636661 UBTD1Q9HAC8 227 aa13.67□□□□□ -0.22
CLCN2-215ENST00000636661 VENTXO95231 258 aa13.67□□□□□ -0.22
CLCN2-215ENST00000636661 TIMM23BQ5SRD1 257 aa13.67□□□□□ -0.22
CLCN2-215ENST00000636661 WNT10AQ9GZT5 417 aa13.67□□□□□ -0.22
CLCN2-215ENST00000636661 METRNQ9UJH8 293 aa13.67□□□□□ -0.22
CLCN2-215ENST00000636661 MRPS18CQ9Y3D5 142 aaKnown RBP13.67□□□□□ -0.22
CLCN2-215ENST00000636661 CBY1Q9Y3M2 126 aa13.67□□□□□ -0.22
CLCN2-215ENST00000636661 TICRRQ7Z2Z1 1910 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 IGHV3OR16-13A0A075B7E8 117 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 IGHV3-74A0A0B4J1X5 117 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 OR9G9P0C7N8 305 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 ZNF146Q15072 292 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 GUCD1Q96NT3 240 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 SEMA5BQ9P283 1151 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 C5orf52A6NGY3 159 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 RNF224P0DH78 156 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 SMIM17P0DL12 118 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 CD40P25942 277 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 SRSF4Q08170 494 aaKnown RBP13.66□□□□□ -0.22
CLCN2-215ENST00000636661 SNRNP40Q96DI7 357 aaKnown RBP13.66□□□□□ -0.22
CLCN2-215ENST00000636661 GP6Q9HCN6 339 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 GOLT1BQ9Y3E0 138 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 IGHV3OR16-8A0A075B7F1 116 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 IGKV3D-15A0A087WSY6 115 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 B3GALT5-AS1P59052 145 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 HOXA4Q00056 320 aaPredicted RBP13.66□□□□□ -0.22
CLCN2-215ENST00000636661 HERPUD1Q15011 391 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 TMEM42Q69YG0 159 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 FAM19A2Q8N3H0 131 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 BMPERQ8N8U9 685 aa13.66□□□□□ -0.22
CLCN2-215ENST00000636661 CSPG4Q6UVK1 2322 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms