RNA–Protein interactions for RNA: ENST00000636603.1

CHRNA7-217, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-217ENST00000636603 VAX2Q9UIW0 290 aa12.51□□□□□ -0.41
CHRNA7-217ENST00000636603 B4DEV8 164 aa12.5□□□□□ -0.41
CHRNA7-217ENST00000636603 YIF1AO95070 293 aa12.5□□□□□ -0.41
CHRNA7-217ENST00000636603 RPS16P62249 146 aaKnown RBP12.5□□□□□ -0.41
CHRNA7-217ENST00000636603 C1orf229Q6ZS94 237 aaPredicted RBP12.5□□□□□ -0.41
CHRNA7-217ENST00000636603 TCTEX1D2Q8WW35 142 aa12.5□□□□□ -0.41
CHRNA7-217ENST00000636603 P2RX4Q99571 388 aa12.5□□□□□ -0.41
CHRNA7-217ENST00000636603 ONECUT1Q9UBC0 465 aa12.5□□□□□ -0.41
CHRNA7-217ENST00000636603 VWC2LB2RUY7 222 aa12.5□□□□□ -0.41
CHRNA7-217ENST00000636603 RAB29O14966 203 aa12.5□□□□□ -0.41
CHRNA7-217ENST00000636603 ARF6P62330 175 aa12.5□□□□□ -0.41
CHRNA7-217ENST00000636603 Q8N7P7 452 aa12.5□□□□□ -0.41
CHRNA7-217ENST00000636603 LY6G5BQ8NDX9 201 aa12.5□□□□□ -0.41
CHRNA7-217ENST00000636603 ZNF251Q9BRH9 671 aa12.5□□□□□ -0.41
CHRNA7-217ENST00000636603 TMPRSS5Q9H3S3 457 aa12.5□□□□□ -0.41
CHRNA7-217ENST00000636603 GSN-AS1Q9NRJ2 163 aa12.5□□□□□ -0.41
CHRNA7-217ENST00000636603 CEBPZOSA8MTT3 80 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 PHOX2AO14813 284 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 HIST1H2BKO60814 126 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 HIST1H2BJP06899 126 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 IGHV1-8P0DP01 117 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 PAX1P15863 534 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 HIST1H2BOP23527 126 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 HIST1H2BBP33778 126 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 HIST1H2BDP58876 126 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 HIST1H2BCP62807 126 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 CATR1Q13166 79 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 HIST2H2BEQ16778 126 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 CLEC12BQ2HXU8 276 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 VWC2Q2TAL6 325 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 RPL39P5Q59GN2 51 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 ZNF439Q8NDP4 499 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 HIST1H2BHQ93079 126 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 HIST1H2BNQ99877 126 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 HIST1H2BMQ99879 126 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 IFI27L2Q9H2X8 130 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 TMEM242Q9NWH2 141 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 DOK5Q9P104 306 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 LINC00587B1AMM8 73 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 HMGB3O15347 200 aaKnown RBP12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 PNRC1Q12796 327 aaPredicted RBP12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 ZNF674Q2M3X9 581 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 Q3ZCU0 254 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 SPINK9Q5DT21 86 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 NCR3LG1Q68D85 454 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 SPNS3Q6ZMD2 512 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 C8orf46Q8TAG6 207 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 DTD1Q8TEA8 209 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 LHX4Q969G2 390 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 TMEM147Q9BVK8 224 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 RAB9BQ9NP90 201 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 NIT2Q9NQR4 276 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 ITPR2Q14571 2701 aa12.49□□□□□ -0.41
CHRNA7-217ENST00000636603 CYB5BO43169 146 aa12.48□□□□□ -0.41
CHRNA7-217ENST00000636603 ATP6V1FQ16864 119 aa12.48□□□□□ -0.41
CHRNA7-217ENST00000636603 DEFB113Q30KQ7 82 aa12.48□□□□□ -0.41
CHRNA7-217ENST00000636603 ZNF66Q6ZN08 573 aa12.48□□□□□ -0.41
CHRNA7-217ENST00000636603 ABHD5Q8WTS1 349 aa12.48□□□□□ -0.41
CHRNA7-217ENST00000636603 GATAD1Q8WUU5 269 aa12.48□□□□□ -0.41
CHRNA7-217ENST00000636603 EDARADDQ8WWZ3 215 aa12.48□□□□□ -0.41
CHRNA7-217ENST00000636603 TCEAL7Q9BRU2 100 aa12.48□□□□□ -0.41
CHRNA7-217ENST00000636603 SLC39A9Q9NUM3 307 aa12.48□□□□□ -0.41
CHRNA7-217ENST00000636603 PRRC2AP48634 2157 aaKnown RBP12.48□□□□□ -0.41
CHRNA7-217ENST00000636603 TRGC2P03986 189 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 LIPFP07098 398 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 OR9G9P0C7N8 305 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 GPR12P47775 334 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 LYG1Q8N1E2 194 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 TCTEX1D1Q8N7M0 179 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 SLC25A22Q9H936 323 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 C15orf62A8K5M9 175 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 NDUFS8O00217 210 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 S100A9P06702 114 aaKnown RBP12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 FABP1P07148 127 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 DEFA4P12838 97 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 FGF7P21781 194 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 CDX1P47902 265 aaPredicted RBP12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 NDUFA6P56556 154 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 AARDQ4LEZ3 155 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 H2BFWTQ7Z2G1 175 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 UNC79Q9P2D8 2635 aa12.47□□□□□ -0.41
CHRNA7-217ENST00000636603 CELSR1Q9NYQ6 3014 aa12.46□□□□□ -0.41
CHRNA7-217ENST00000636603 MARCH11A6NNE9 402 aa12.46□□□□□ -0.41
CHRNA7-217ENST00000636603 COX7A1P24310 79 aa12.46□□□□□ -0.41
CHRNA7-217ENST00000636603 DUTP33316 252 aaKnown RBP12.46□□□□□ -0.41
CHRNA7-217ENST00000636603 MEF2BQ02080 365 aaPredicted RBP12.46□□□□□ -0.41
CHRNA7-217ENST00000636603 ABHD12Q8N2K0 398 aa12.46□□□□□ -0.41
CHRNA7-217ENST00000636603 MAPK1IP1LQ8NDC0 245 aa12.46□□□□□ -0.41
CHRNA7-217ENST00000636603 HSD17B10Q99714 261 aaKnown RBP12.46□□□□□ -0.41
CHRNA7-217ENST00000636603 QTRT1Q9BXR0 403 aaKnown RBP12.46□□□□□ -0.41
CHRNA7-217ENST00000636603 NPCDR1Q9BY65 106 aa12.46□□□□□ -0.41
CHRNA7-217ENST00000636603 CCDC168Q8NDH2 2452 aa12.46□□□□□ -0.42
CHRNA7-217ENST00000636603 SAA2-SAA4A0A096LPE2 208 aa12.45□□□□□ -0.42
CHRNA7-217ENST00000636603 CTXND1A0A1B0GTU2 59 aa12.45□□□□□ -0.42
CHRNA7-217ENST00000636603 CLDN34H7C241 214 aa12.45□□□□□ -0.42
CHRNA7-217ENST00000636603 SAA2P0DJI9 122 aaPredicted RBP12.45□□□□□ -0.42
CHRNA7-217ENST00000636603 PAX2Q02962 417 aa12.45□□□□□ -0.42
CHRNA7-217ENST00000636603 SLC25A48Q6ZT89 311 aaKnown RBP12.45□□□□□ -0.42
CHRNA7-217ENST00000636603 OR10P1Q8NGE3 313 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms