RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 Q8TCH9 128 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 KLF14Q8TD94 323 aaPredicted RBP12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 TECRQ9NZ01 308 aaKnown RBP12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 SMIM27A0A1W2PRY6 76 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 BMPR1BO00238 502 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 MORN2Q502X0 79 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 RASL11AQ6T310 242 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 OR5B3Q8NH48 314 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 RCHY1Q96PM5 261 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 ZPBPQ9BS86 351 aa12.22□□□□□ -0.45
CACNA1A-220ENST00000635988 C15orf61A6NNL5 157 aa12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 NIT1Q86X76 327 aa12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 DOLPP1Q86YN1 238 aa12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 OR4S2Q8NH73 311 aa12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 C19orf24Q9BVV8 132 aa12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 SLC35D1Q9NTN3 355 aa12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 CEP290O15078 2479 aa12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 APCSP02743 223 aa12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 KLF3P57682 345 aaPredicted RBP12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 HSPE1P61604 102 aaKnown RBP12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 KIAA1644Q3SXP7 199 aa12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 STUMQ69YW2 141 aa12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 INO80CQ6PI98 192 aaPredicted RBP12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 MIR17HGQ75NE6 70 aa12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 VKORC1L1Q8N0U8 176 aa12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 ZNF439Q8NDP4 499 aa12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 RNASE7Q9H1E1 156 aaKnown RBP12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 FOXA2Q9Y261 457 aaPredicted RBP12.21□□□□□ -0.45
CACNA1A-220ENST00000635988 IZUMO1RA6ND01 250 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 SPINK4O60575 86 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 NDUFB8O95169 186 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 MPV17P39210 176 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 PTTG1IPP53801 180 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 TAS2R45P59539 299 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 LTC4SQ16873 150 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 IBA57Q5T440 356 aaKnown RBP12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 FAM90A1Q86YD7 464 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 TSKUQ8WUA8 353 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 NEUROG1Q92886 237 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 ZNF331Q9NQX6 463 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 BET1LQ9NYM9 111 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 METRNQ9UJH8 293 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 CDC42EP3Q9UKI2 254 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 SIT1Q9Y3P8 196 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 TRAV3A0A0B4J244 114 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 CER1O95813 267 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 LINC00869P0C866 280 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 SELENOVP59797 346 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 LEMD1Q68G75 181 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 PPP1R35Q8TAP8 253 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 COMMD5Q9GZQ3 224 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 PLEKHA3Q9HB20 300 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 TUBG2Q9NRH3 451 aa12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 KLF13Q9Y2Y9 288 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-220ENST00000635988 A0A1W2PRE2 83 aa12.19□□□□□ -0.46
CACNA1A-220ENST00000635988 CA2P00918 260 aa12.19□□□□□ -0.46
CACNA1A-220ENST00000635988 IGFBP2P18065 325 aa12.19□□□□□ -0.46
CACNA1A-220ENST00000635988 PPOXP50336 477 aa12.19□□□□□ -0.46
CACNA1A-220ENST00000635988 NABP2Q9BQ15 211 aa12.19□□□□□ -0.46
CACNA1A-220ENST00000635988 FAM234AQ9H0X4 552 aa12.19□□□□□ -0.46
CACNA1A-220ENST00000635988 TMEM14BQ9NUH8 114 aa12.19□□□□□ -0.46
CACNA1A-220ENST00000635988 KLRC4-KLRK1H3BQV0 150 aa12.19□□□□□ -0.46
CACNA1A-220ENST00000635988 EDDM3AQ14507 147 aa12.19□□□□□ -0.46
CACNA1A-220ENST00000635988 FXYD3Q14802 87 aa12.19□□□□□ -0.46
CACNA1A-220ENST00000635988 PNKDQ8N490 385 aa12.19□□□□□ -0.46
CACNA1A-220ENST00000635988 OR2D3Q8NGH3 330 aa12.19□□□□□ -0.46
CACNA1A-220ENST00000635988 WIPF2Q8TF74 440 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-220ENST00000635988 GAL3ST2Q9H3Q3 398 aa12.19□□□□□ -0.46
CACNA1A-220ENST00000635988 PCSK5Q92824 1860 aa12.19□□□□□ -0.46
CACNA1A-220ENST00000635988 ACTL6BO94805 426 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 TOMM40O96008 361 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 TSPOP30536 169 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 PRDX2P32119 198 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 MEOX1P50221 254 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 TCL1AP56279 114 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 MZT1Q08AG7 82 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 CR1LQ2VPA4 569 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 MRPL54Q6P161 138 aaKnown RBP12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 ZNF738Q8NE65 137 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 DCTN5Q9BTE1 182 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 PTPRBP23467 1997 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 DOCK10Q96BY6 2186 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 ITGB1BP1O14713 200 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 TFF1P04155 84 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 USF1P22415 310 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 RPL39P5Q59GN2 51 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 DDB2Q92466 427 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 IFI27L2Q9H2X8 130 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 SERTAD4Q9NUC0 356 aa12.18□□□□□ -0.46
CACNA1A-220ENST00000635988 NKX6-3A6NJ46 265 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 F2RL2O00254 374 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 TIMM8AO60220 97 aaPredicted RBP12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 OR7C2O60412 319 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 ATP5IP56385 69 aaPredicted RBP12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 SLC35B1P78383 322 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 UBE2V1Q13404 147 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 CD177Q8N6Q3 437 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 WNT10AQ9GZT5 417 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 IGHV2-26A0A0B4J1V2 119 aa12.17□□□□□ -0.46
CACNA1A-220ENST00000635988 MGST3O14880 152 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms