RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 CAV2P51636 162 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 NUTF2P61970 127 aaKnown RBP1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 RPL31P62899 125 aaKnown RBP1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 BLCAPP62952 87 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 GNG3P63215 75 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 SLC35A2P78381 396 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 DAZ2Q13117 558 aaKnown RBP1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 MAPRE2Q15555 327 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 ZNF726P1Q15940 193 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 LY6EQ16553 131 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 GUCA2BQ16661 112 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 SMIM21Q3B7S5 101 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 CT45A1Q5HYN5 189 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 MINOS1Q5TGZ0 78 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 LCN8Q6JVE9 175 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 RPL13AP3Q6NVV1 102 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 RASSF6Q6ZTQ3 369 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 CALHM1Q8IU99 346 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 KRTAP11-1Q8IUC1 163 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 Q8N6K4 173 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 OR9Q1Q8NGQ5 310 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 OR2T4Q8NH00 348 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 OR52E5Q8NH55 327 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 CT45A3Q8NHU0 189 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 OTOSQ8NHW6 89 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 RPS4Y2Q8TD47 263 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 LZICQ8WZA0 190 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 MALSU1Q96EH3 234 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 PHYHIPLQ96FC7 376 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 COPS4Q9BT78 406 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 RTL8AQ9BWD3 113 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 GABARAPL3Q9BY60 117 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 NDEL1Q9GZM8 345 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 NSRP1Q9H0G5 558 aaKnown RBP1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 LINC00574Q9H8X3 128 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 DAZ3Q9NR90 486 aaKnown RBP1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 FGFR1OP2Q9NVK5 253 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 RASL12Q9NYN1 266 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 USE1Q9NZ43 259 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 NUFIP1Q9UHK0 495 aaKnown RBP1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 TSSC4Q9Y5U2 329 aaPredicted RBP1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 F11RQ9Y624 299 aaKnown RBP1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 MINOS1-NBL1R4GNA1 71 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 V9GYS6 101 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 HERC1Q15751 4861 aa1.67□□□□□ -2.14
SMARCB1-208ENST00000634926 APOBP04114 4563 aaKnown RBP1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 VPS13BQ7Z7G8 4022 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 SORL1Q92673 2214 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 IGKV1-27A0A075B6S5 117 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 A0A1B0GTI1 187 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 GGT3PA6NGU5 568 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 FAM183AA6NL82 134 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 RFPL4AA6NLU0 287 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 ZNF850A8MQ14 1090 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 FAM25EA8MYX2 175 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 RFPL4AL1F8VTS6 287 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 SMKR1H3BMG3 65 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 ZNF701M0R085 212 aaPredicted RBP1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 ZNF593O00488 134 aaPredicted RBP1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 NUPL2O15504 423 aaKnown RBP1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 FKBP6O75344 327 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 E2F6O75461 281 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 DHRS3O75911 302 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 GADD45GO95257 159 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 SOX14O95416 240 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 INSP01308 110 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 APOC1P02654 83 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 TTRP02766 147 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 CSN2P05814 226 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 ZNF728P0DKX0 622 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 CGB3P0DN86 165 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 CGB7P0DN87 165 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 COX4I1P13073 169 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 ALOX5APP20292 161 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 ERP29P30040 261 aaKnown RBP1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 RAB13P51153 203 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 BLVRAP53004 296 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 NDPQ00604 133 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 EMX1Q04741 257 aaPredicted RBP1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 MXD1Q05195 221 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 REG3AQ06141 175 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 MEF2CQ06413 473 aaPredicted RBP1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 ZNF79Q15937 498 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 SNCBQ16143 134 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 RNF212Q495C1 297 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 ZNF684Q5T5D7 378 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 UBE2UQ5VVX9 321 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 DEGS2Q6QHC5 323 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 PP632Q6XCG6 107 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 TEX43Q6ZNM6 134 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 LINC00173Q6ZV60 143 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 OR2W3Q7Z3T1 314 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 CAMK2N1Q7Z7J9 78 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 CYP4Z1Q86W10 505 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 OSR2Q8N2R0 312 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 ZNF561Q8N587 486 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 FAM71E2Q8N5Q1 922 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 C5orf56Q8N8D9 126 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 TMEM104Q8NE00 496 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 PROKR2Q8NFJ6 384 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms