RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 TDGF1P13385 188 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 DMRTA2Q96SC8 542 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 G6PC2Q9NQR9 355 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 ABCA1O95477 2261 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 COLCA1Q6ZS62 124 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 ZNF703Q9H7S9 590 aaPredicted RBP9.97□□□□□ -0.81
SHPRH-211ENST00000629427 PAPPA-AS1Q5QFB9 102 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 SMIM8Q96KF7 97 aa9.97□□□□□ -0.81
SHPRH-211ENST00000629427 WNK2Q9Y3S1 2297 aa9.96□□□□□ -0.81
SHPRH-211ENST00000629427 LINC00470Q9BZP3 86 aa9.96□□□□□ -0.81
SHPRH-211ENST00000629427 SEMA5BQ9P283 1151 aa9.96□□□□□ -0.81
SHPRH-211ENST00000629427 PEMTQ9UBM1 199 aa9.96□□□□□ -0.81
SHPRH-211ENST00000629427 IGHV3OR16-8A0A075B7F1 116 aa9.96□□□□□ -0.81
SHPRH-211ENST00000629427 MALP21145 153 aa9.96□□□□□ -0.81
SHPRH-211ENST00000629427 SAPCD1Q5SSQ6 148 aa9.96□□□□□ -0.81
SHPRH-211ENST00000629427 C1QTNF12Q5T7M4 302 aa9.96□□□□□ -0.81
SHPRH-211ENST00000629427 LINC00862A6NCI5 91 aa9.96□□□□□ -0.82
SHPRH-211ENST00000629427 CDKN1AP38936 164 aa9.96□□□□□ -0.82
SHPRH-211ENST00000629427 CENPWQ5EE01 88 aa9.96□□□□□ -0.82
SHPRH-211ENST00000629427 OR1P1Q8NH06 330 aa9.96□□□□□ -0.82
SHPRH-211ENST00000629427 C18orf15Q96N68 181 aa9.96□□□□□ -0.82
SHPRH-211ENST00000629427 TGIF2-C20orf24A0A0A6YYL0 155 aa9.96□□□□□ -0.82
SHPRH-211ENST00000629427 ASIPP42127 132 aa9.96□□□□□ -0.82
SHPRH-211ENST00000629427 C12orf54Q6X4T0 127 aa9.96□□□□□ -0.82
SHPRH-211ENST00000629427 ATOH7Q8N100 152 aa9.96□□□□□ -0.82
SHPRH-211ENST00000629427 GBF1Q92538 1859 aa9.96□□□□□ -0.82
SHPRH-211ENST00000629427 EFEMP2O95967 443 aa9.96□□□□□ -0.82
SHPRH-211ENST00000629427 HLA-DRB1P01911 266 aa9.96□□□□□ -0.82
SHPRH-211ENST00000629427 TTC32Q5I0X7 151 aa9.96□□□□□ -0.82
SHPRH-211ENST00000629427 FAM131CQ96AQ9 280 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 RRHO14718 337 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 GLMPQ8WWB7 406 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 PPP1R3EQ9H7J1 279 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 TRBV5-7A0A0A0MS05 114 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 A0A0G2JMM0 328 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 A0A1W2PPB8 328 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 A0A1W2PRS3 328 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 KIR3DP1A8MWS1 328 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 C1orf100Q5SVJ3 147 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 LDLRAD2Q5SZI1 272 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 COL6A6A6NMZ7 2263 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 MUC21A0A0G2JKD1 596 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 MUC21A0A140T8X8 626 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 IGHV3-11P01762 117 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 IGHV1-2P23083 117 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 LY6DQ14210 128 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 MUC21Q5SSG8 566 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 TEX45Q8NA69 505 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 CHCHD2Q9Y6H1 151 aaPredicted RBP9.95□□□□□ -0.82
SHPRH-211ENST00000629427 IGKV3D-20A0A0C4DH25 116 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 NPIPB4C9JG80 1138 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 H0YL77 283 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 GCHFRP30047 84 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 ZIC4Q8N9L1 334 aa9.95□□□□□ -0.82
SHPRH-211ENST00000629427 C7orf66A4D0T2 115 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 REPIN1Q9BWE0 567 aaKnown RBP9.94□□□□□ -0.82
SHPRH-211ENST00000629427 SDF2L1Q9HCN8 221 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 IGKV1D-42A0A075B6H8 117 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 TMEM187Q14656 261 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 NSUN5P1Q3KNT7 163 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 RTN4RL2Q86UN3 420 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 PLXND1Q9Y4D7 1925 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 TRAV24A0A0B4J272 114 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 IGHV2OR16-5A0A0B4J2B6 119 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 NBEAP1P0C6P0 100 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 GTSCR1Q86UQ5 136 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 PRELID3AQ96N28 172 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 GDF15Q99988 308 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 A0A1W2PR77 199 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 CTHRC1Q96CG8 243 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 RNASE6Q93091 150 aaKnown RBP9.94□□□□□ -0.82
SHPRH-211ENST00000629427 C11orf44Q8N8P7 122 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 OR10S1Q8NGN2 331 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 GP6Q9HCN6 339 aa9.94□□□□□ -0.82
SHPRH-211ENST00000629427 MED12Q93074 2177 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 HBBP68871 147 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 JMJD8Q96S16 334 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 C21orf62Q9NYP8 219 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 SPTBN2O15020 2390 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 NPIPB9F8W1W9 429 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 PEX7O00628 323 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 RAMP1O60894 148 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 NPIPB7O75200 414 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 TSPAN13O95857 204 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 CELA3BP08861 270 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 LRRC37AA6NMS7 1700 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 TCRBV4S1A1TA0A5B7 111 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 MSGN1A6NI15 193 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 LOC390937A0A1W2PQ73 354 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 RND3P61587 244 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 FAM216BQ8N7L0 139 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 TRAV8-6A0A0B4J262 113 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 GRIFINA4D1Z8 144 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 EGR1P18146 543 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 ZNF506Q5JVG8 444 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 REC114Q7Z4M0 266 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 NPFFR1Q9GZQ6 430 aa9.93□□□□□ -0.82
SHPRH-211ENST00000629427 ZNF883P0CG24 379 aa9.92□□□□□ -0.82
SHPRH-211ENST00000629427 HELZP42694 1942 aaKnown RBP9.92□□□□□ -0.82
SHPRH-211ENST00000629427 CHD3Q12873 2000 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms