RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 J3QR06 171 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 M0R1W7 72 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 OPN1MWP04001 364 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 OPN1MW2P0DN77 364 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 OPN1MW3P0DN78 364 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 MORN2Q502X0 79 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 LCN15Q6UWW0 184 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 RASL11BQ9BPW5 248 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 UBE2L5PA0A1B0GUS4 154 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 OR13C7P0DN81 318 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 DEFA4P12838 97 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 TMEM11P17152 192 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 SRD5A1P18405 259 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 GATA3P23771 443 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 PRTN3P24158 256 aa10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.18□□□□□ -0.78
SYNGAP1-207ENST00000628646 HAGHQ16775 308 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 RUSC1-AS1Q66K80 236 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 COA4Q9NYJ1 87 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 GNG13Q9P2W3 67 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 COLCA2A8K830 154 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 YPEL1O60688 119 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 Q6ZRM9 215 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 YPEL2Q96QA6 119 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 PITPNC1Q9UKF7 332 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 ADGRG4Q8IZF6 3080 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 RBFOX3A6NFN3 312 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 ZFP36P26651 326 aaKnown RBP10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 SPCS3P61009 180 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 TNFRSF9Q07011 255 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 VSTM2AQ8TAG5 236 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 PLEKHA3Q9HB20 300 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 PRNDQ9UKY0 176 aa10.17□□□□□ -0.78
SYNGAP1-207ENST00000628646 ZFP92A6NM28 416 aa10.16□□□□□ -0.78
SYNGAP1-207ENST00000628646 PAX6P26367 422 aa10.16□□□□□ -0.78
SYNGAP1-207ENST00000628646 SPSB3Q6PJ21 355 aa10.16□□□□□ -0.78
SYNGAP1-207ENST00000628646 GCN1Q92616 2671 aaKnown RBP10.16□□□□□ -0.78
SYNGAP1-207ENST00000628646 LMO4P61968 165 aa10.16□□□□□ -0.78
SYNGAP1-207ENST00000628646 PRSS57Q6UWY2 283 aa10.16□□□□□ -0.78
SYNGAP1-207ENST00000628646 FOXC2Q99958 501 aa10.16□□□□□ -0.78
SYNGAP1-207ENST00000628646 ZNRD1Q9P1U0 126 aa10.16□□□□□ -0.78
SYNGAP1-207ENST00000628646 NPFFO15130 113 aa10.16□□□□□ -0.78
SYNGAP1-207ENST00000628646 MC5RP33032 325 aa10.16□□□□□ -0.78
SYNGAP1-207ENST00000628646 EIF4EBP1Q13541 118 aaPredicted RBP10.16□□□□□ -0.78
SYNGAP1-207ENST00000628646 RXFP4Q8TDU9 374 aa10.16□□□□□ -0.78
SYNGAP1-207ENST00000628646 BIN3Q9NQY0 253 aa10.16□□□□□ -0.78
SYNGAP1-207ENST00000628646 WASHC3Q9Y3C0 194 aa10.16□□□□□ -0.78
SYNGAP1-207ENST00000628646 UNC79Q9P2D8 2635 aa10.15□□□□□ -0.78
SYNGAP1-207ENST00000628646 A0A1B0GW64 132 aa10.15□□□□□ -0.78
SYNGAP1-207ENST00000628646 TNXAQ16473 311 aa10.15□□□□□ -0.78
SYNGAP1-207ENST00000628646 RBKSQ9H477 322 aa10.15□□□□□ -0.78
SYNGAP1-207ENST00000628646 TXNL1O43396 289 aa10.15□□□□□ -0.78
SYNGAP1-207ENST00000628646 MMP23AO75900 390 aa10.15□□□□□ -0.78
SYNGAP1-207ENST00000628646 SAA4P35542 130 aa10.15□□□□□ -0.78
SYNGAP1-207ENST00000628646 FLI1Q01543 452 aaPredicted RBP10.15□□□□□ -0.78
SYNGAP1-207ENST00000628646 ZNF585BQ52M93 769 aa10.15□□□□□ -0.78
SYNGAP1-207ENST00000628646 C5orf30Q96GV9 206 aa10.15□□□□□ -0.78
SYNGAP1-207ENST00000628646 PSMG3Q9BT73 122 aaPredicted RBP10.15□□□□□ -0.78
SYNGAP1-207ENST00000628646 MRPL20Q9BYC9 149 aaKnown RBP10.15□□□□□ -0.78
SYNGAP1-207ENST00000628646 SEBOXQ9HB31 216 aaPredicted RBP10.15□□□□□ -0.78
SYNGAP1-207ENST00000628646 APELAP0DMC3 54 aa10.15□□□□□ -0.79
SYNGAP1-207ENST00000628646 CCL20P78556 96 aa10.15□□□□□ -0.79
SYNGAP1-207ENST00000628646 FAM53AQ6NSI3 398 aaPredicted RBP10.15□□□□□ -0.79
SYNGAP1-207ENST00000628646 SLC35E1Q96K37 410 aa10.15□□□□□ -0.79
SYNGAP1-207ENST00000628646 NCOR1P1Q9H4R4 102 aa10.15□□□□□ -0.79
SYNGAP1-207ENST00000628646 SAA2-SAA4A0A096LPE2 208 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 RBFOX2O43251 390 aaKnown RBP eCLIP10.14□□□□□ -0.798e-7■■■■□ 24.2
SYNGAP1-207ENST00000628646 SCGB2A1O75556 95 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 IGKV1D-33P01593 117 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 IGKV1-33P01594 117 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 SAA2P0DJI9 122 aaPredicted RBP10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 LOXL1Q08397 574 aaPredicted RBP10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 UHRF2Q96PU4 802 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 MAP1LC3B2A6NCE7 125 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 S1PR2O95136 353 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 BTF3L4Q96K17 158 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 MAP1LC3BQ9GZQ8 125 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 MARCH11A6NNE9 402 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 SLC25A17O43808 307 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 MPDU1O75352 247 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 IGKV1-5P01602 117 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 KHDC3LQ587J8 217 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 FFAR4Q5NUL3 377 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 TVP23CQ96ET8 276 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 SSX3Q99909 188 aa10.14□□□□□ -0.79
SYNGAP1-207ENST00000628646 A0A1B0GWJ7 208 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 SLC31A2O15432 143 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 TMEM41BQ5BJD5 291 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 RHOVQ96L33 236 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 TMUB1Q9BVT8 246 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 HAX1O00165 279 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 TIMM23O14925 209 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 MT-ND4LP03901 98 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 ATP5IP56385 69 aaPredicted RBP10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 IZUMO4Q1ZYL8 232 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 HLA-DRB5Q30154 266 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 OR10A7Q8NGE5 316 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 YPEL4Q96NS1 127 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 CT45A1Q5HYN5 189 aa10.13□□□□□ -0.79
SYNGAP1-207ENST00000628646 LHFPL4Q7Z7J7 247 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms