RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 ITPR3Q14573 2671 aa19.86■□□□□ 0.77
CAPNS1-215ENST00000628018 C15orf62A8K5M9 175 aa19.86■□□□□ 0.77
CAPNS1-215ENST00000628018 PMS2P5A8MQ11 134 aa19.86■□□□□ 0.77
CAPNS1-215ENST00000628018 INS-IGF2F8WCM5 200 aa19.86■□□□□ 0.77
CAPNS1-215ENST00000628018 RPP30P78346 268 aaKnown RBP19.86■□□□□ 0.77
CAPNS1-215ENST00000628018 ARL16Q0P5N6 197 aa19.86■□□□□ 0.77
CAPNS1-215ENST00000628018 RPL7L1Q6DKI1 246 aaKnown RBP19.86■□□□□ 0.77
CAPNS1-215ENST00000628018 FAM96BQ9Y3D0 163 aa19.86■□□□□ 0.77
CAPNS1-215ENST00000628018 A0A1B0GW64 132 aa19.85■□□□□ 0.77
CAPNS1-215ENST00000628018 FCN1O00602 326 aa19.85■□□□□ 0.77
CAPNS1-215ENST00000628018 COMPP49747 757 aaPredicted RBP19.85■□□□□ 0.77
CAPNS1-215ENST00000628018 PLGLAQ15195 96 aa19.85■□□□□ 0.77
CAPNS1-215ENST00000628018 TNXAQ16473 311 aa19.85■□□□□ 0.77
CAPNS1-215ENST00000628018 C5orf64Q2M2E5 130 aa19.85■□□□□ 0.77
CAPNS1-215ENST00000628018 ITGB1BP2Q9UKP3 347 aa19.85■□□□□ 0.77
CAPNS1-215ENST00000628018 SMAD7O15105 426 aaKnown RBP19.84■□□□□ 0.77
CAPNS1-215ENST00000628018 JTBO76095 146 aa19.84■□□□□ 0.77
CAPNS1-215ENST00000628018 ACTL6BO94805 426 aa19.84■□□□□ 0.77
CAPNS1-215ENST00000628018 SSBP2P81877 361 aaPredicted RBP19.84■□□□□ 0.77
CAPNS1-215ENST00000628018 EXOSC2Q13868 293 aaKnown RBP19.84■□□□□ 0.77
CAPNS1-215ENST00000628018 ZNF767PQ75MW2 155 aa19.84■□□□□ 0.77
CAPNS1-215ENST00000628018 OR10W1Q8NGF6 305 aa19.84■□□□□ 0.77
CAPNS1-215ENST00000628018 OR1S2Q8NGQ3 325 aa19.84■□□□□ 0.77
CAPNS1-215ENST00000628018 PIFOQ8TCI5 191 aa19.84■□□□□ 0.77
CAPNS1-215ENST00000628018 CREBBPQ92793 2442 aa19.84■□□□□ 0.77
CAPNS1-215ENST00000628018 ZANQ9Y493 2812 aa19.84■□□□□ 0.77
CAPNS1-215ENST00000628018 A0A1W2PN81 502 aa19.83■□□□□ 0.77
CAPNS1-215ENST00000628018 IFNA10P01566 189 aa19.83■□□□□ 0.77
CAPNS1-215ENST00000628018 FBP1P09467 338 aa19.83■□□□□ 0.77
CAPNS1-215ENST00000628018 TPT1P13693 172 aaKnown RBP19.83■□□□□ 0.77
CAPNS1-215ENST00000628018 CHRNA7P36544 502 aa19.83■□□□□ 0.77
CAPNS1-215ENST00000628018 CLINT1Q14677 625 aa19.83■□□□□ 0.77
CAPNS1-215ENST00000628018 UBAC2Q8NBM4 344 aa19.83■□□□□ 0.77
CAPNS1-215ENST00000628018 TMEM170AQ8WVE7 144 aa19.83■□□□□ 0.77
CAPNS1-215ENST00000628018 PAIP2BQ9ULR5 123 aaKnown RBP19.83■□□□□ 0.77
CAPNS1-215ENST00000628018 CCDC168Q8NDH2 2452 aa19.83■□□□□ 0.76
CAPNS1-215ENST00000628018 NCBP2LA6PVI3 153 aaKnown RBP19.82■□□□□ 0.76
CAPNS1-215ENST00000628018 IFNA7P01567 189 aa19.82■□□□□ 0.76
CAPNS1-215ENST00000628018 RPL27AP46776 148 aaKnown RBP19.82■□□□□ 0.76
CAPNS1-215ENST00000628018 HBG1P69891 147 aa19.82■□□□□ 0.76
CAPNS1-215ENST00000628018 HBG2P69892 147 aa19.82■□□□□ 0.76
CAPNS1-215ENST00000628018 BAP18Q8IXM2 172 aa19.82■□□□□ 0.76
CAPNS1-215ENST00000628018 SLC24A4Q8NFF2 622 aa19.82■□□□□ 0.76
CAPNS1-215ENST00000628018 NANPQ8TBE9 248 aa19.82■□□□□ 0.76
CAPNS1-215ENST00000628018 C1RLQ9NZP8 487 aa19.82■□□□□ 0.76
CAPNS1-215ENST00000628018 CELSR1Q9NYQ6 3014 aa19.82■□□□□ 0.76
CAPNS1-215ENST00000628018 CA2P00918 260 aa19.81■□□□□ 0.76
CAPNS1-215ENST00000628018 BSXQ3C1V8 233 aa19.81■□□□□ 0.76
CAPNS1-215ENST00000628018 OR8G2PQ6IF36 304 aa19.81■□□□□ 0.76
CAPNS1-215ENST00000628018 SSX3Q99909 188 aa19.81■□□□□ 0.76
CAPNS1-215ENST00000628018 BORCS7-ASMTA0A0B4J1R7 106 aa19.81■□□□□ 0.76
CAPNS1-215ENST00000628018 SCAF4O95104 1147 aaKnown RBP19.81■□□□□ 0.76
CAPNS1-215ENST00000628018 HTR2BP41595 481 aa19.81■□□□□ 0.76
CAPNS1-215ENST00000628018 GNB1P62873 340 aa19.81■□□□□ 0.76
CAPNS1-215ENST00000628018 EIF5AP63241 154 aaKnown RBP19.81■□□□□ 0.76
CAPNS1-215ENST00000628018 LRRC75BQ2VPJ9 315 aa19.81■□□□□ 0.76
CAPNS1-215ENST00000628018 Q8N9W7 124 aa19.81■□□□□ 0.76
CAPNS1-215ENST00000628018 ATP5SQ99766 215 aa19.81■□□□□ 0.76
CAPNS1-215ENST00000628018 ARV1Q9H2C2 271 aa19.81■□□□□ 0.76
CAPNS1-215ENST00000628018 OR8U8P0C7N1 319 aa19.8■□□□□ 0.76
CAPNS1-215ENST00000628018 NPY1RP25929 384 aa19.8■□□□□ 0.76
CAPNS1-215ENST00000628018 ATP5IP56385 69 aaPredicted RBP19.8■□□□□ 0.76
CAPNS1-215ENST00000628018 ERHP84090 104 aaKnown RBP19.8■□□□□ 0.76
CAPNS1-215ENST00000628018 WT1-ASQ06250 92 aa19.8■□□□□ 0.76
CAPNS1-215ENST00000628018 SLC38A11Q08AI6 406 aa19.8■□□□□ 0.76
CAPNS1-215ENST00000628018 ZNF266Q14584 549 aa19.8■□□□□ 0.76
CAPNS1-215ENST00000628018 AANATQ16613 207 aa19.8■□□□□ 0.76
CAPNS1-215ENST00000628018 OR10P1Q8NGE3 313 aa19.8■□□□□ 0.76
CAPNS1-215ENST00000628018 PHYHIPLQ96FC7 376 aa19.8■□□□□ 0.76
CAPNS1-215ENST00000628018 DFFBO76075 338 aa19.79■□□□□ 0.76
CAPNS1-215ENST00000628018 RAB11AP62491 216 aa19.79■□□□□ 0.76
CAPNS1-215ENST00000628018 ALKAL2Q6UX46 152 aa19.79■□□□□ 0.76
CAPNS1-215ENST00000628018 C9orf139Q6ZV77 190 aa19.79■□□□□ 0.76
CAPNS1-215ENST00000628018 SRSF12Q8WXF0 261 aaKnown RBP19.79■□□□□ 0.76
CAPNS1-215ENST00000628018 UBQLN2Q9UHD9 624 aa19.79■□□□□ 0.76
CAPNS1-215ENST00000628018 ABCA1O95477 2261 aa19.79■□□□□ 0.76
CAPNS1-215ENST00000628018 IGLC7A0M8Q6 106 aa19.78■□□□□ 0.76
CAPNS1-215ENST00000628018 RNASE2P10153 161 aaKnown RBP19.78■□□□□ 0.76
CAPNS1-215ENST00000628018 C2orf83Q53S99 150 aa19.78■□□□□ 0.76
CAPNS1-215ENST00000628018 ETV3LQ6ZN32 361 aa19.78■□□□□ 0.76
CAPNS1-215ENST00000628018 PINX1Q96BK5 328 aaKnown RBP19.78■□□□□ 0.76
CAPNS1-215ENST00000628018 PLXNB1O43157 2135 aa19.77■□□□□ 0.76
CAPNS1-215ENST00000628018 ZNF469Q96JG9 3925 aaPredicted RBP19.77■□□□□ 0.76
CAPNS1-215ENST00000628018 TEX22C9J3V5 150 aa19.77■□□□□ 0.76
CAPNS1-215ENST00000628018 PRSS46E5RG02 174 aa19.77■□□□□ 0.76
CAPNS1-215ENST00000628018 ATP6V1FQ16864 119 aa19.77■□□□□ 0.76
CAPNS1-215ENST00000628018 ZNF562Q6V9R5 426 aa19.77■□□□□ 0.76
CAPNS1-215ENST00000628018 BCL6BQ8N143 479 aaPredicted RBP19.77■□□□□ 0.76
CAPNS1-215ENST00000628018 LILRB2Q8N423 598 aa19.77■□□□□ 0.76
CAPNS1-215ENST00000628018 SCARB1Q8WTV0 552 aa19.77■□□□□ 0.76
CAPNS1-215ENST00000628018 RBM14Q96PK6 669 aaKnown RBP19.77■□□□□ 0.76
CAPNS1-215ENST00000628018 GINS3Q9BRX5 216 aa19.77■□□□□ 0.76
CAPNS1-215ENST00000628018 CNIH1O95406 144 aa19.76■□□□□ 0.75
CAPNS1-215ENST00000628018 OR13C7P0DN81 318 aa19.76■□□□□ 0.75
CAPNS1-215ENST00000628018 SNCAP37840 140 aa19.76■□□□□ 0.75
CAPNS1-215ENST00000628018 KRTAP1-1Q07627 177 aa19.76■□□□□ 0.75
CAPNS1-215ENST00000628018 MRPL41Q8IXM3 137 aaKnown RBP19.76■□□□□ 0.75
CAPNS1-215ENST00000628018 AKAP9Q99996 3911 aa19.76■□□□□ 0.75
CAPNS1-215ENST00000628018 HLA-DRB1P01911 266 aa19.76■□□□□ 0.75
CAPNS1-215ENST00000628018 FXYD3Q14802 87 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms