RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 MALSU1Q96EH3 234 aa9.43□□□□□ -0.9
CCDC163-201ENST00000625766 A1L4Q6 167 aa9.42□□□□□ -0.9
CCDC163-201ENST00000625766 CGB1A6NKQ9 187 aa9.42□□□□□ -0.9
CCDC163-201ENST00000625766 E7EUB6 86 aa9.42□□□□□ -0.9
CCDC163-201ENST00000625766 TIMM23O14925 209 aa9.42□□□□□ -0.9
CCDC163-201ENST00000625766 SOX15O60248 233 aa9.42□□□□□ -0.9
CCDC163-201ENST00000625766 MPDU1O75352 247 aa9.42□□□□□ -0.9
CCDC163-201ENST00000625766 IFNA4P05014 189 aa9.42□□□□□ -0.9
CCDC163-201ENST00000625766 EBI3Q14213 229 aa9.42□□□□□ -0.9
CCDC163-201ENST00000625766 TOR2AQ5JU69 321 aa9.42□□□□□ -0.9
CCDC163-201ENST00000625766 AKR1C8PQ5T2L2 129 aa9.42□□□□□ -0.9
CCDC163-201ENST00000625766 NPBQ8NG41 125 aa9.42□□□□□ -0.9
CCDC163-201ENST00000625766 RSG1Q9BU20 258 aa9.42□□□□□ -0.9
CCDC163-201ENST00000625766 HINT2Q9BX68 163 aa9.42□□□□□ -0.9
CCDC163-201ENST00000625766 LPAR2Q9HBW0 351 aa9.42□□□□□ -0.9
CCDC163-201ENST00000625766 WDR83OSQ9Y284 106 aa9.42□□□□□ -0.9
CCDC163-201ENST00000625766 UTP20O75691 2785 aaKnown RBP9.42□□□□□ -0.9
CCDC163-201ENST00000625766 WNK2Q9Y3S1 2297 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 IGHV4-30-2A0A087WSY4 118 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 OPN1MWP04001 364 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 OPN1MW2P0DN77 364 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 OPN1MW3P0DN78 364 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 LGALS4P56470 323 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 PPP1R27Q86WC6 154 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 NPVFQ9HCQ7 196 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 FBXO7Q9Y3I1 522 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 HILPDAQ9Y5L2 63 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 USP9YO00507 2555 aaPredicted RBP9.41□□□□□ -0.9
CCDC163-201ENST00000625766 ASH1LQ9NR48 2969 aaKnown RBP9.41□□□□□ -0.9
CCDC163-201ENST00000625766 VPS13CQ709C8 3753 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 TRAV1-1A0A0B4J248 108 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 UBE2L5PA0A1B0GUS4 154 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 TSPAN15O95858 294 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 MOSP00540 346 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 RNASE2P10153 161 aaKnown RBP9.41□□□□□ -0.9
CCDC163-201ENST00000625766 SNCAP37840 140 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 OR10W1Q8NGF6 305 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 FAM213BQ8TBF2 198 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 AJUBAQ96IF1 538 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 RPRMQ9NS64 109 aa9.41□□□□□ -0.9
CCDC163-201ENST00000625766 A0A1B0GW64 132 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 BTBD17A6NE02 478 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 MBP02144 154 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 CD5P06127 495 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 H2AFB1P0C5Y9 115 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 ZP3P21754 424 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 CNTFRP26992 372 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 SSX2Q16385 188 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 ZNF787Q6DD87 383 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 PVRIGQ6DKI7 326 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 TREML4Q6UXN2 200 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 LFNGQ8NES3 379 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 MBD3L1Q8WWY6 194 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 PERPQ96FX8 193 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 C1orf159Q96HA4 380 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 NPCDR1Q9BY65 106 aa9.4□□□□□ -0.9
CCDC163-201ENST00000625766 LSM4Q9Y4Z0 139 aaKnown RBP9.4□□□□□ -0.9
CCDC163-201ENST00000625766 C17orf112F2Z3M2 114 aa9.4□□□□□ -0.91
CCDC163-201ENST00000625766 NDUFA3O95167 84 aa9.4□□□□□ -0.91
CCDC163-201ENST00000625766 SNRNP70P08621 437 aaKnown RBP9.4□□□□□ -0.91
CCDC163-201ENST00000625766 SLC25A16P16260 332 aa9.4□□□□□ -0.91
CCDC163-201ENST00000625766 FGF7P21781 194 aa9.4□□□□□ -0.91
CCDC163-201ENST00000625766 GPX4P36969 197 aaPredicted RBP9.4□□□□□ -0.91
CCDC163-201ENST00000625766 COMPP49747 757 aaPredicted RBP9.4□□□□□ -0.91
CCDC163-201ENST00000625766 WT1-ASQ06250 92 aa9.4□□□□□ -0.91
CCDC163-201ENST00000625766 ZNF616Q08AN1 781 aa9.4□□□□□ -0.91
CCDC163-201ENST00000625766 TUSC1Q2TAM9 212 aa9.4□□□□□ -0.91
CCDC163-201ENST00000625766 SPSB3Q6PJ21 355 aa9.4□□□□□ -0.91
CCDC163-201ENST00000625766 DYNAPQ8N1N2 210 aa9.4□□□□□ -0.91
CCDC163-201ENST00000625766 OR2T10Q8NGZ9 312 aa9.4□□□□□ -0.91
CCDC163-201ENST00000625766 CACNG8Q8WXS5 425 aa9.4□□□□□ -0.91
CCDC163-201ENST00000625766 NRGNQ92686 78 aa9.4□□□□□ -0.91
CCDC163-201ENST00000625766 EAF1Q96JC9 268 aaPredicted RBP9.4□□□□□ -0.91
CCDC163-201ENST00000625766 SCRT1Q9BWW7 348 aa9.4□□□□□ -0.91
CCDC163-201ENST00000625766 TPSG1Q9NRR2 321 aa9.4□□□□□ -0.91
CCDC163-201ENST00000625766 METTL1Q9UBP6 276 aaKnown RBP9.4□□□□□ -0.91
CCDC163-201ENST00000625766 TMEM218A2RU14 115 aa9.39□□□□□ -0.91
CCDC163-201ENST00000625766 ACTL6BO94805 426 aa9.39□□□□□ -0.91
CCDC163-201ENST00000625766 PLA2G2AP14555 144 aa9.39□□□□□ -0.91
CCDC163-201ENST00000625766 SUB1P53999 127 aaKnown RBP eCLIP9.39□□□□□ -0.91
CCDC163-201ENST00000625766 TMEM41BQ5BJD5 291 aa9.39□□□□□ -0.91
CCDC163-201ENST00000625766 MRPL41Q8IXM3 137 aaKnown RBP9.39□□□□□ -0.91
CCDC163-201ENST00000625766 Q8N6K4 173 aa9.39□□□□□ -0.91
CCDC163-201ENST00000625766 ZNF709Q8N972 641 aa9.39□□□□□ -0.91
CCDC163-201ENST00000625766 BPIFCQ8NFQ6 507 aa9.39□□□□□ -0.91
CCDC163-201ENST00000625766 LINC00052Q96N35 136 aa9.39□□□□□ -0.91
CCDC163-201ENST00000625766 SRSF8Q9BRL6 282 aaKnown RBP9.39□□□□□ -0.91
CCDC163-201ENST00000625766 CENPVL3A0A0U1RRI6 287 aa9.38□□□□□ -0.91
CCDC163-201ENST00000625766 J3QKU1 62 aa9.38□□□□□ -0.91
CCDC163-201ENST00000625766 IGKV1D-33P01593 117 aa9.38□□□□□ -0.91
CCDC163-201ENST00000625766 IGKV1-33P01594 117 aa9.38□□□□□ -0.91
CCDC163-201ENST00000625766 RPL27AP46776 148 aaKnown RBP9.38□□□□□ -0.91
CCDC163-201ENST00000625766 CLEC12BQ2HXU8 276 aa9.38□□□□□ -0.91
CCDC163-201ENST00000625766 ARSJQ5FYB0 599 aaPredicted RBP9.38□□□□□ -0.91
CCDC163-201ENST00000625766 CRYBG3Q68DQ2 2970 aa9.38□□□□□ -0.91
CCDC163-201ENST00000625766 RNASEH2CQ8TDP1 164 aaKnown RBP9.38□□□□□ -0.91
CCDC163-201ENST00000625766 FBXL15Q9H469 300 aa9.38□□□□□ -0.91
CCDC163-201ENST00000625766 SMDT1Q9H4I9 107 aa9.38□□□□□ -0.91
CCDC163-201ENST00000625766 VSIRQ9H7M9 311 aa9.38□□□□□ -0.91
CCDC163-201ENST00000625766 PTPN13Q12923 2485 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms