RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 ERVK-16P61578 105 aa9.95□□□□□ -0.82
PNKP-217ENST00000625216 H2BFWTQ7Z2G1 175 aa9.95□□□□□ -0.82
PNKP-217ENST00000625216 FAM71E2Q8N5Q1 922 aa9.95□□□□□ -0.82
PNKP-217ENST00000625216 DMBX1Q8NFW5 382 aa9.95□□□□□ -0.82
PNKP-217ENST00000625216 OSR1Q8TAX0 266 aaPredicted RBP9.95□□□□□ -0.82
PNKP-217ENST00000625216 GON7Q9BXV9 100 aa9.95□□□□□ -0.82
PNKP-217ENST00000625216 PLSCR3Q9NRY6 295 aa9.95□□□□□ -0.82
PNKP-217ENST00000625216 OR5AC2Q9NZP5 309 aa9.95□□□□□ -0.82
PNKP-217ENST00000625216 MBD2Q9UBB5 411 aa9.95□□□□□ -0.82
PNKP-217ENST00000625216 RCL1Q9Y2P8 373 aaKnown RBP9.95□□□□□ -0.82
PNKP-217ENST00000625216 FXYD6-FXYD2A0A087WZ82 144 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 TRAV3A0A0B4J244 114 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 AP4M1O00189 453 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 SHOXO15266 292 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 IGLV2-23P01705 113 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 PF4P02776 101 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 SAA1P0DJI8 122 aaPredicted RBP9.94□□□□□ -0.82
PNKP-217ENST00000625216 CD33P20138 364 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 PSMB6P28072 239 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 MC5RP33032 325 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 OR2B8PP59922 312 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 OXLD1Q5BKU9 147 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 CXorf66Q5JRM2 361 aaPredicted RBP9.94□□□□□ -0.82
PNKP-217ENST00000625216 OR4A47Q6IF82 309 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 C11orf87Q6NUJ2 197 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 PUSL1Q8N0Z8 303 aaKnown RBP9.94□□□□□ -0.82
PNKP-217ENST00000625216 Q8N9W7 124 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 OR1S1Q8NH92 325 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 FLYWCH2Q96CP2 140 aaKnown RBP9.94□□□□□ -0.82
PNKP-217ENST00000625216 RITA1Q96K30 269 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 RHOVQ96L33 236 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 RASL11BQ9BPW5 248 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 RNF126Q9BV68 326 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 C11orf1Q9H5F2 150 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 COA4Q9NYJ1 87 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 NSG2Q9Y328 171 aa9.94□□□□□ -0.82
PNKP-217ENST00000625216 LSM5Q9Y4Y9 91 aaKnown RBP9.94□□□□□ -0.82
PNKP-217ENST00000625216 TGP01266 2768 aa9.93□□□□□ -0.82
PNKP-217ENST00000625216 HRASP01112 189 aa9.93□□□□□ -0.82
PNKP-217ENST00000625216 IL6RP08887 468 aaPredicted RBP9.93□□□□□ -0.82
PNKP-217ENST00000625216 SLC25A4P12235 298 aa9.93□□□□□ -0.82
PNKP-217ENST00000625216 LYL1P12980 280 aa9.93□□□□□ -0.82
PNKP-217ENST00000625216 CNTFRP26992 372 aa9.93□□□□□ -0.82
PNKP-217ENST00000625216 NKX2-1P43699 371 aaPredicted RBP9.93□□□□□ -0.82
PNKP-217ENST00000625216 RPS16P62249 146 aaKnown RBP9.93□□□□□ -0.82
PNKP-217ENST00000625216 POLR2GP62487 172 aaKnown RBP eCLIP9.93□□□□□ -0.82
PNKP-217ENST00000625216 FGL1Q08830 312 aa9.93□□□□□ -0.82
PNKP-217ENST00000625216 KHDC1LQ5JSQ8 128 aa9.93□□□□□ -0.82
PNKP-217ENST00000625216 PRSS54Q6PEW0 395 aa9.93□□□□□ -0.82
PNKP-217ENST00000625216 C10orf99Q6UWK7 81 aa9.93□□□□□ -0.82
PNKP-217ENST00000625216 ZNF329Q86UD4 541 aa9.93□□□□□ -0.82
PNKP-217ENST00000625216 STPG2Q8N412 459 aa9.93□□□□□ -0.82
PNKP-217ENST00000625216 C9orf62Q8N4C0 152 aa9.93□□□□□ -0.82
PNKP-217ENST00000625216 HYLS1Q96M11 299 aa9.93□□□□□ -0.82
PNKP-217ENST00000625216 NOL4LQ96MY1 436 aaPredicted RBP9.93□□□□□ -0.82
PNKP-217ENST00000625216 TPSG1Q9NRR2 321 aa9.93□□□□□ -0.82
PNKP-217ENST00000625216 UPK2O00526 184 aa9.92□□□□□ -0.82
PNKP-217ENST00000625216 ST8SIA3O43173 380 aa9.92□□□□□ -0.82
PNKP-217ENST00000625216 DEDDO75618 318 aa9.92□□□□□ -0.82
PNKP-217ENST00000625216 RPL23AP62750 156 aaKnown RBP9.92□□□□□ -0.82
PNKP-217ENST00000625216 ID3Q02535 119 aa9.92□□□□□ -0.82
PNKP-217ENST00000625216 LAMTOR1Q6IAA8 161 aa9.92□□□□□ -0.82
PNKP-217ENST00000625216 TEX38Q6PEX7 206 aa9.92□□□□□ -0.82
PNKP-217ENST00000625216 RCC1LQ96I51 464 aaKnown RBP9.92□□□□□ -0.82
PNKP-217ENST00000625216 QTRT1Q9BXR0 403 aaKnown RBP9.92□□□□□ -0.82
PNKP-217ENST00000625216 MAGT1Q9H0U3 335 aa9.92□□□□□ -0.82
PNKP-217ENST00000625216 BET1LQ9NYM9 111 aa9.92□□□□□ -0.82
PNKP-217ENST00000625216 ZNF580Q9UK33 172 aa9.92□□□□□ -0.82
PNKP-217ENST00000625216 C15orf61A6NNL5 157 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 SLC25A17O43808 307 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 SSSCA1O60232 199 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 KBTBD11O94819 623 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 CRYGBP07316 175 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 PET100P0DJ07 73 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 MYOD1P15172 320 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 CXCL2P19875 107 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 F2RL1P55085 397 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 UBE2KP61086 200 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 MRGPRG-AS1Q2M3A8 158 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 AARDQ4LEZ3 155 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 THAP6Q8TBB0 222 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 DCUN1D4Q92564 292 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 GPR61Q9BZJ8 451 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 HSPB7Q9UBY9 170 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 LINC00527Q9UJ94 153 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 TNFSF18Q9UNG2 199 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 PLXNB1O43157 2135 aa9.91□□□□□ -0.82
PNKP-217ENST00000625216 TNCP24821 2201 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 RNF222A6NCQ9 220 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 MSGN1A6NI15 193 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 LINC01548A6NM66 108 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 HMSDA8MTL9 139 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 FAM90A26D6RGX4 464 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 ARPC5O15511 151 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 TMEM50AO95807 157 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 IGF1P05019 195 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 ELANEP08246 267 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 IGLL1P15814 213 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 MYCNOSP40205 109 aa9.9□□□□□ -0.82
PNKP-217ENST00000625216 LGALS7P47929 136 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms