RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-215	ENST00000622972	LIN54	Q6MZP7	749 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	SSX9	Q7RTT3	188 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	FAM219A	Q8IW50	185 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	SLC38A6	Q8IZM9	456 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	ZBTB34	Q8NCN2	500 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	OR52B4	Q8NGK2	314 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	OR1N2	Q8NGR9	330 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	TMEM167A	Q8TBQ9	72 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	FLYWCH2	Q96CP2	140 aa	Known RBP	4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	ZNF414	Q96IQ9	312 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	ADTRP	Q96IZ2	230 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	UBE2E2	Q96LR5	201 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	SPATA25	Q9BR10	227 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	CCDC32	Q9BV29	185 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	KLK15	Q9H2R5	256 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	OR51J1	Q9H342	316 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	NAA60	Q9H7X0	242 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	NSG2	Q9Y328	171 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972		U3KQK5	164 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	PRKDC	P78527	4128 aa	Known RBP	4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	HMX3	A6NHT5	357 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	MPTX1	A8MV57	137 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	OVOL1	O14753	267 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	SPDEF	O95238	335 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	IFNA6	P05013	189 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	IGF1	P05019	195 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	RAB9A	P51151	201 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	SLURP1	P55000	103 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	MFAP2	P55001	183 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	OR2B8P	P59922	312 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	UBE2M	P61081	183 aa	Known RBP	4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	RPS16	P62249	146 aa	Known RBP	4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	TMEM267	Q0VDI3	215 aa	Predicted RBP	4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	ZNF846	Q147U1	533 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	SURF2	Q15527	256 aa	Predicted RBP	4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	RTL8B	Q17RB0	113 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	TRIQK	Q629K1	86 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	PPP1R27	Q86WC6	154 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	SELENOH	Q8IZQ5	122 aa	Known RBP	4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	ZNF491	Q8N8L2	437 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	OR10W1	Q8NGF6	305 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	OR4S2	Q8NH73	311 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	OSR1	Q8TAX0	266 aa	Predicted RBP	4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	MYOZ3	Q8TDC0	251 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	DCUN1D4	Q92564	292 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	ZNF486	Q96H40	463 aa	Predicted RBP	4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	PRRT1	Q99946	306 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	WDR12	Q9GZL7	423 aa	Known RBP	4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	TMEM222	Q9H0R3	208 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	GNB4	Q9HAV0	340 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	PLEKHA2	Q9HB19	425 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	ZNF355P	Q9NSJ1	428 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	TMEM140	Q9NV12	185 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	NUBP2	Q9Y5Y2	271 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	SMAD5-AS1	Q9Y6J3	95 aa		4.53	□□□□□ -1.68
LINC00963-215	ENST00000622972	C3orf85	A0A1B0GTC6	90 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	IGLC7	A0M8Q6	106 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	MARCH11	A6NNE9	402 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	UPK2	O00526	184 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	SLC22A5	O76082	557 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	CDS2	O95674	445 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	HPRT1	P00492	218 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	KRAS	P01116	189 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	IGHV3-11	P01762	117 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	PRH1	P02810	166 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	AREG	P15514	252 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	AKR1C4	P17516	323 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	LGALS7	P47929	136 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	INSL3	P51460	131 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	TPPP2	P59282	170 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	TAS2R31	P59538	309 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	GNB1	P62873	340 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	WT1-AS	Q06250	92 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	SPINK9	Q5DT21	86 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	NMS	Q5H8A3	153 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	UNQ5815/PRO19632	Q6UWF5	114 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	LYZL2	Q7Z4W2	148 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	NRARP	Q7Z6K4	114 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	TMED4	Q7Z7H5	227 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	ZNF429	Q86V71	674 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	SLC25A42	Q86VD7	318 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	SLC35G3	Q8N808	338 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	RNF152	Q8N8N0	203 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	TEX45	Q8NA69	505 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	MINDY2	Q8NBR6	621 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	LFNG	Q8NES3	379 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	GRPEL2	Q8TAA5	225 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	TMEM170A	Q8WVE7	144 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	SRSF12	Q8WXF0	261 aa	Known RBP	4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	S100Z	Q8WXG8	99 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	ARPC1A	Q92747	370 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	GALNT14	Q96FL9	552 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	TMEM56	Q96MV1	263 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	MS4A10	Q96PG2	267 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	OR4C12	Q96R67	309 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	TSNAX	Q99598	290 aa	Known RBP	4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	RNF5	Q99942	180 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	SEC22C	Q9BRL7	303 aa		4.52	□□□□□ -1.69
LINC00963-215	ENST00000622972	ALX4	Q9H161	411 aa	Predicted RBP	4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms