RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 CMPK1P30085 196 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 OPRM1P35372 400 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 CCR2P41597 374 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 RPL35P42766 123 aaKnown RBP2.38□□□□□ -2.03
BRCA1-229ENST00000621897 GABRA2P47869 451 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 CXCL12P48061 93 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 DEFA1P59665 94 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 RPS11P62280 158 aaKnown RBP eCLIP2.38□□□□□ -2.03
BRCA1-229ENST00000621897 LRP11Q86VZ4 500 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 TCTE3Q8IZS6 198 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 SLC22A24Q8N4F4 322 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 ZNF555Q8NEP9 628 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 OR2M3Q8NG83 312 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 OR52R1Q8NGF1 315 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 ISOC1Q96CN7 298 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 TP53RKQ96S44 253 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 TIMM17AQ99595 171 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 CCL13Q99616 98 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 THTPAQ9BU02 230 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 SMIM3Q9BZL3 60 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 YIPF3Q9GZM5 350 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 IMUPQ9GZP8 106 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 LPAR5Q9H1C0 372 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 RNF122Q9H9V4 155 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 MRPL16Q9NX20 251 aaKnown RBP2.38□□□□□ -2.03
BRCA1-229ENST00000621897 TVP23BQ9NYZ1 205 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 NUFIP1Q9UHK0 495 aaKnown RBP2.38□□□□□ -2.03
BRCA1-229ENST00000621897 AK3Q9UIJ7 227 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 RPUSD1Q9UJJ7 312 aaKnown RBP2.38□□□□□ -2.03
BRCA1-229ENST00000621897 CYSLTR1Q9Y271 337 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 MYH7P12883 1935 aa2.38□□□□□ -2.03
BRCA1-229ENST00000621897 SLIT3O75094 1523 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 IBTKQ9P2D0 1353 aaPredicted RBP2.37□□□□□ -2.03
BRCA1-229ENST00000621897 A0A096LNJ9 63 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 TRAV38-1A0A0B4J264 116 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 TRDV1A0A1B0GX56 115 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 TMEM72A0PK05 275 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 C4orf51C9J302 202 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 CORTO00230 105 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 LST1O00453 97 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 CD5LO43866 347 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 GNG7O60262 68 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 CXorf1O96002 111 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 OPN1SWP03999 348 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 HLA-DPB1P04440 258 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 ADRA2AP08913 450 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 UCHL1P09936 223 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 AKR1D1P51857 326 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 LINC00313P59037 77 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 GABARAPL2P60520 117 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 RPS25P62851 125 aaKnown RBP2.37□□□□□ -2.03
BRCA1-229ENST00000621897 PPP3R1P63098 170 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 ELOCQ15369 112 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 GLYATL3Q5SZD4 288 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 MRPL2Q5T653 305 aaKnown RBP2.37□□□□□ -2.03
BRCA1-229ENST00000621897 SCIMPQ6UWF3 145 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 HRCT1Q6UXD1 115 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 LHFPL1Q86WI0 220 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 SAXO1Q8IYX7 474 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 KRTCAP2Q8N6L1 136 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 ACBD7Q8N6N7 88 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 NPBQ8NG41 125 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 OR10D4PQ8NGN7 298 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 OR1J4Q8NGS1 313 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 SLC25A40Q8TBP6 338 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 MRPL30Q8TCC3 161 aaKnown RBP2.37□□□□□ -2.03
BRCA1-229ENST00000621897 LMX1AQ8TE12 382 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 ZNF418Q8TF45 676 aaPredicted RBP2.37□□□□□ -2.03
BRCA1-229ENST00000621897 ABHD14BQ96IU4 210 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 C2orf50Q96LR7 162 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 ERMAPQ96PL5 475 aaPredicted RBP2.37□□□□□ -2.03
BRCA1-229ENST00000621897 PRADC1Q9BSG0 188 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 CACYBPQ9HB71 228 aaKnown RBP2.37□□□□□ -2.03
BRCA1-229ENST00000621897 TAF9BQ9HBM6 251 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 FBXL12Q9NXK8 326 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 DNAJC12Q9UKB3 198 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 ZFP30Q9Y2G7 519 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 AMMECR1Q9Y4X0 333 aaPredicted RBP2.37□□□□□ -2.03
BRCA1-229ENST00000621897 HECW1Q76N89 1606 aa2.37□□□□□ -2.03
BRCA1-229ENST00000621897 NUP210Q8TEM1 1887 aaPredicted RBP2.37□□□□□ -2.03
BRCA1-229ENST00000621897 DICER1Q9UPY3 1922 aaKnown RBP2.36□□□□□ -2.03
BRCA1-229ENST00000621897 PRG4Q92954 1404 aaPredicted RBP2.36□□□□□ -2.03
BRCA1-229ENST00000621897 PCM1Q15154 2024 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 IGLV4-60A0A075B6I1 120 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 TRAV19A0A0A6YYK7 116 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 IGHV3-64DA0A0J9YX35 117 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 A0A1B0GW64 132 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 A8MUN3 132 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 B4DEV8 164 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 NDUFC2-KCTD14E9PQ53 114 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 H7BYZ3 331 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 DPM2O94777 84 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 LTAP01374 205 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 CSRP1P21291 193 aaKnown RBP2.36□□□□□ -2.03
BRCA1-229ENST00000621897 OPRK1P41145 380 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 CA7P43166 264 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 HOXC5Q00444 222 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 MOBPQ13875 183 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 HES3Q5TGS1 186 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 FKBP1CQ5VVH2 108 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms