RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 TAS2R30P59541 319 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 TMEM204Q9BSN7 226 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 RNF24Q9Y225 148 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 MALRD1Q5VYJ5 2156 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 A0A1W2PRD5 423 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 A0A1W2PRF3 423 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 A0A1W2PRM7 423 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 ZNF727A8MUV8 499 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 RBFOX2O43251 390 aaKnown RBP eCLIP8.11□□□□□ -1.11
VTA1-205ENST00000620996 PRB1P04280 392 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 IGHV1-8P0DP01 117 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 MDKP21741 143 aaPredicted RBP8.11□□□□□ -1.11
VTA1-205ENST00000620996 GNB2P62879 340 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 OR5I1Q13606 314 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 TMEM30BQ3MIR4 351 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 TMEM155Q4W5P6 130 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 BTNL8Q6UX41 500 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 ZNF705AQ6ZN79 300 aaPredicted RBP8.11□□□□□ -1.11
VTA1-205ENST00000620996 DDB2Q92466 427 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 PACRGQ96M98 296 aaPredicted RBP8.11□□□□□ -1.11
VTA1-205ENST00000620996 KAAG1Q9UBP8 84 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 DCHS2Q6V1P9 2916 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 A0A1W2PPR1 153 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 SCAF4O95104 1147 aaKnown RBP8.11□□□□□ -1.11
VTA1-205ENST00000620996 RELBQ01201 579 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 ZNF343Q6P1L6 599 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 TCF19Q9Y242 345 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 OR51B2Q9Y5P1 312 aa8.11□□□□□ -1.11
VTA1-205ENST00000620996 DSCAML1Q8TD84 2053 aa8.1□□□□□ -1.11
VTA1-205ENST00000620996 TNFRSF13BO14836 293 aaPredicted RBP8.1□□□□□ -1.11
VTA1-205ENST00000620996 LCN15Q6UWW0 184 aa8.1□□□□□ -1.11
VTA1-205ENST00000620996 TMEM14EPQ6UXP3 125 aa8.1□□□□□ -1.11
VTA1-205ENST00000620996 OR9G1Q8NH87 305 aa8.1□□□□□ -1.11
VTA1-205ENST00000620996 FAM216AQ8WUB2 273 aa8.1□□□□□ -1.11
VTA1-205ENST00000620996 NEIL1Q96FI4 390 aaPredicted RBP8.1□□□□□ -1.11
VTA1-205ENST00000620996 PUS1Q9Y606 427 aaKnown RBP eCLIP8.1□□□□□ -1.11
VTA1-205ENST00000620996 HRNRQ86YZ3 2850 aaPredicted RBP8.1□□□□□ -1.11
VTA1-205ENST00000620996 ZFYVE26Q68DK2 2539 aa8.1□□□□□ -1.11
VTA1-205ENST00000620996 UMAD1C9J7I0 102 aa8.1□□□□□ -1.11
VTA1-205ENST00000620996 M0R143 59 aa8.1□□□□□ -1.11
VTA1-205ENST00000620996 HMGB3O15347 200 aaKnown RBP8.1□□□□□ -1.11
VTA1-205ENST00000620996 ARF6P62330 175 aa8.1□□□□□ -1.11
VTA1-205ENST00000620996 GUK1Q16774 197 aa8.1□□□□□ -1.11
VTA1-205ENST00000620996 HAGHQ16775 308 aa8.1□□□□□ -1.11
VTA1-205ENST00000620996 ZNF709Q8N972 641 aa8.1□□□□□ -1.11
VTA1-205ENST00000620996 PINX1Q96BK5 328 aaKnown RBP8.1□□□□□ -1.11
VTA1-205ENST00000620996 TMEM133Q9H2Q1 129 aa8.1□□□□□ -1.11
VTA1-205ENST00000620996 VSIRQ9H7M9 311 aa8.1□□□□□ -1.11
VTA1-205ENST00000620996 COL12A1Q99715 3063 aa8.1□□□□□ -1.11
VTA1-205ENST00000620996 HCFC1P51610 2035 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 NUDT19A8MXV4 375 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 IL3RAP26951 378 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 FGF8P55075 233 aaPredicted RBP8.09□□□□□ -1.11
VTA1-205ENST00000620996 MOB3BQ86TA1 216 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 OR10A7Q8NGE5 316 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 FLYWCH2Q96CP2 140 aaKnown RBP8.09□□□□□ -1.11
VTA1-205ENST00000620996 CLUHP3Q96NS8 147 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 TMEM147Q9BVK8 224 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 TUBA4BQ9H853 241 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 LINC00574Q9H8X3 128 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 TACC2O95359 2948 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 SRRM4A7MD48 611 aaKnown RBP8.09□□□□□ -1.11
VTA1-205ENST00000620996 OR2C1O95371 312 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 SAA1P0DJI8 122 aaPredicted RBP8.09□□□□□ -1.11
VTA1-205ENST00000620996 GPR6P46095 362 aaPredicted RBP8.09□□□□□ -1.11
VTA1-205ENST00000620996 WDR25Q64LD2 544 aaPredicted RBP8.09□□□□□ -1.11
VTA1-205ENST00000620996 TAF15Q92804 592 aaKnown RBP eCLIP8.09□□□□□ -1.11
VTA1-205ENST00000620996 VPS25Q9BRG1 176 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 WDR61Q9GZS3 305 aaKnown RBP8.09□□□□□ -1.11
VTA1-205ENST00000620996 GAB2Q9UQC2 676 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 IGSF10Q6WRI0 2623 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 C15orf61A6NNL5 157 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 RRHO14718 337 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 OR13C7P0DN81 318 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 PLA2G5P39877 138 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 RBX1P62877 108 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 CCL20P78556 96 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 TLE4Q04727 773 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 LRRC75BQ2VPJ9 315 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 ZNF833PQ6ZTB9 187 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 PNKDQ8N490 385 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 NEU4Q8WWR8 484 aaPredicted RBP8.09□□□□□ -1.11
VTA1-205ENST00000620996 LHX4Q969G2 390 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 PLEKHA3Q9HB20 300 aa8.09□□□□□ -1.11
VTA1-205ENST00000620996 CFAP46Q8IYW2 2715 aa8.08□□□□□ -1.12
VTA1-205ENST00000620996 SNCAP37840 140 aa8.08□□□□□ -1.12
VTA1-205ENST00000620996 PBDC1Q9BVG4 233 aa8.08□□□□□ -1.12
VTA1-205ENST00000620996 IGHV2-26A0A0B4J1V2 119 aa8.08□□□□□ -1.12
VTA1-205ENST00000620996 C15orf62A8K5M9 175 aa8.08□□□□□ -1.12
VTA1-205ENST00000620996 H0YJW9 148 aa8.08□□□□□ -1.12
VTA1-205ENST00000620996 TRGC2P03986 189 aa8.08□□□□□ -1.12
VTA1-205ENST00000620996 DVL1P1P54792 670 aaPredicted RBP8.08□□□□□ -1.12
VTA1-205ENST00000620996 PRRX1P54821 245 aa8.08□□□□□ -1.12
VTA1-205ENST00000620996 RAB11AP62491 216 aa8.08□□□□□ -1.12
VTA1-205ENST00000620996 TMEM186Q96B77 213 aa8.08□□□□□ -1.12
VTA1-205ENST00000620996 RARRES2Q99969 163 aa8.08□□□□□ -1.12
VTA1-205ENST00000620996 COMMD5Q9GZQ3 224 aa8.08□□□□□ -1.12
VTA1-205ENST00000620996 DNAJC4Q9NNZ3 241 aa8.08□□□□□ -1.12
VTA1-205ENST00000620996 RPRMQ9NS64 109 aa8.08□□□□□ -1.12
VTA1-205ENST00000620996 SEC14L6B5MCN3 397 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms