RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 BLCAPP62952 87 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 SSBP2P81877 361 aaPredicted RBP6.36□□□□□ -1.39
CPNE3-209ENST00000620393 PRCDQ00LT1 54 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 FXYD3Q14802 87 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 TNXAQ16473 311 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 LRRC37A5PQ49AS3 106 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 C11orf87Q6NUJ2 197 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 PRSS54Q6PEW0 395 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 THAP6Q8TBB0 222 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 ZNF418Q8TF45 676 aaPredicted RBP6.36□□□□□ -1.39
CPNE3-209ENST00000620393 SMIM8Q96KF7 97 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 RAB40CQ96S21 281 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 RBKSQ9H477 322 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 C11orf1Q9H5F2 150 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 TNFRSF19Q9NS68 423 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 LSM5Q9Y4Y9 91 aaKnown RBP6.36□□□□□ -1.39
CPNE3-209ENST00000620393 HIVEP1P15822 2718 aa6.36□□□□□ -1.39
CPNE3-209ENST00000620393 SETXQ7Z333 2677 aaKnown RBP6.35□□□□□ -1.39
CPNE3-209ENST00000620393 SONP18583 2426 aaKnown RBP6.35□□□□□ -1.39
CPNE3-209ENST00000620393 ELOA3CA0A087WX78 387 aaPredicted RBP6.35□□□□□ -1.39
CPNE3-209ENST00000620393 IGHV7-81A0A0B4J1V7 117 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 A0A1B0GW64 132 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 MSGN1A6NI15 193 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 CGB1A6NKQ9 187 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 CEBPZOSA8MTT3 80 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 E5RGE8 158 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 INS-IGF2F8WCM5 200 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 WRBO00258 174 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 DEDDO75618 318 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 NXPH3O95157 252 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 TMEM50AO95807 157 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 C1QBP02746 253 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 FAM157CP0CG43 387 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 PVALBP20472 110 aaPredicted RBP6.35□□□□□ -1.39
CPNE3-209ENST00000620393 VDAC2P45880 294 aaPredicted RBP6.35□□□□□ -1.39
CPNE3-209ENST00000620393 PAX9P55771 341 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 TAS2R30P59541 319 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 S100A10P60903 97 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 GNB1P62873 340 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 ERHP84090 104 aaKnown RBP6.35□□□□□ -1.39
CPNE3-209ENST00000620393 C10orf55Q5SWW7 151 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 TMEM65Q6PI78 240 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 DTD1Q8TEA8 209 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 SRSF12Q8WXF0 261 aaKnown RBP6.35□□□□□ -1.39
CPNE3-209ENST00000620393 PPP1R14BQ96C90 147 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 CIB3Q96Q77 187 aaPredicted RBP6.35□□□□□ -1.39
CPNE3-209ENST00000620393 SRSF8Q9BRL6 282 aaKnown RBP6.35□□□□□ -1.39
CPNE3-209ENST00000620393 HINT2Q9BX68 163 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 HIPK2Q9H2X6 1198 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 ENY2Q9NPA8 101 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 OR5AC2Q9NZP5 309 aa6.35□□□□□ -1.39
CPNE3-209ENST00000620393 RCL1Q9Y2P8 373 aaKnown RBP6.35□□□□□ -1.39
CPNE3-209ENST00000620393 CELSR1Q9NYQ6 3014 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 A0A1W2PN81 502 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 SH2D7A6NKC9 451 aaPredicted RBP6.34□□□□□ -1.39
CPNE3-209ENST00000620393 LINC01548A6NM66 108 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 HMSDA8MTL9 139 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 TEX22C9J3V5 150 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 L7N2F9 121 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 SSSCA1O60232 199 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 GPR137BO60478 399 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 IGHG2P01859 326 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 PET100P0DJ07 73 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 IAPPP10997 89 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 EGR2P11161 476 aaPredicted RBP6.34□□□□□ -1.39
CPNE3-209ENST00000620393 CHRNA7P36544 502 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 P2RY1P47900 373 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 ATP5IP56385 69 aaPredicted RBP6.34□□□□□ -1.39
CPNE3-209ENST00000620393 HILS1P60008 231 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 RPL23AP62750 156 aaKnown RBP6.34□□□□□ -1.39
CPNE3-209ENST00000620393 VAMP2P63027 116 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 SPINK9Q5DT21 86 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 HSD17B13Q7Z5P4 300 aaPredicted RBP6.34□□□□□ -1.39
CPNE3-209ENST00000620393 ZNF546Q86UE3 836 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 MRPL41Q8IXM3 137 aaKnown RBP6.34□□□□□ -1.39
CPNE3-209ENST00000620393 OR2C3Q8N628 320 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 OR11H4Q8NGC9 324 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 OR10W1Q8NGF6 305 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 ARPC1AQ92747 370 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 HYLS1Q96M11 299 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 TMEM68Q96MH6 324 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 DUX5Q96PT3 197 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 JMJD8Q96S16 334 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 HSPB9Q9BQS6 159 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 PLEKHA3Q9HB20 300 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 ESM1Q9NQ30 184 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 HEYLQ9NQ87 328 aaPredicted RBP6.34□□□□□ -1.39
CPNE3-209ENST00000620393 PSENENQ9NZ42 101 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 MBD2Q9UBB5 411 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 WSB1Q9Y6I7 421 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 U3KQ87 197 aa6.34□□□□□ -1.39
CPNE3-209ENST00000620393 IGLC7A0M8Q6 106 aa6.33□□□□□ -1.4
CPNE3-209ENST00000620393 FAM24AA6NFZ4 105 aa6.33□□□□□ -1.4
CPNE3-209ENST00000620393 DNAJC9-AS1A6NH13 148 aa6.33□□□□□ -1.4
CPNE3-209ENST00000620393 KCNAB3O43448 404 aa6.33□□□□□ -1.4
CPNE3-209ENST00000620393 TSC22D2O75157 780 aa6.33□□□□□ -1.4
CPNE3-209ENST00000620393 OR13C7P0DN81 318 aa6.33□□□□□ -1.4
CPNE3-209ENST00000620393 HOXA1P49639 335 aaPredicted RBP6.33□□□□□ -1.4
CPNE3-209ENST00000620393 RPP30P78346 268 aaKnown RBP6.33□□□□□ -1.4
CPNE3-209ENST00000620393 NDPQ00604 133 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms