RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 MFSD2BA6NFX1 497 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 K7EQG2 157 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 HRASP01112 189 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 HLA-DQB1P01920 261 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 PRH1P02810 166 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 PSMD7P51665 324 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 TAS2R31P59538 309 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 UNC119Q13432 240 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 SPATA12Q7Z6I5 190 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 LRRTM1Q86UE6 522 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 ZBTB34Q8NCN2 500 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 OR5B3Q8NH48 314 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 RHOXF1Q8NHV9 184 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 URM1Q9BTM9 101 aaKnown RBP3.24□□□□□ -1.89
SNCA-213ENST00000618500 FAAP24Q9BTP7 215 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 SSBP4Q9BWG4 385 aaPredicted RBP3.24□□□□□ -1.89
SNCA-213ENST00000618500 CHMP1AQ9HD42 196 aaPredicted RBP3.24□□□□□ -1.89
SNCA-213ENST00000618500 BABAM2Q9NXR7 383 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 A8MTW9 85 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 C1QBP02746 253 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 REG1AP05451 166 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 CTXN2P0C2S0 81 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 CD36P16671 472 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 CRHBPP24387 322 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 SOX2P48431 317 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 APRG1Q8IVJ8 170 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 STHQ8IWL8 128 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 GDPD1Q8N9F7 314 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 OR6M1Q8NGM8 313 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 IL1F10Q8WWZ1 152 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 LPAR5Q9H1C0 372 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 DCSTAMPQ9H295 470 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 Q9H3A6 140 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 BANF2Q9H503 90 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 COMMD9Q9P000 198 aa3.24□□□□□ -1.89
SNCA-213ENST00000618500 LINC00473A8K010 186 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 FABP7O15540 132 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 CRYZL1O95825 349 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 DTYMKP23919 212 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 GPR183P32249 361 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 XGP55808 180 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 RPL8P62917 257 aaKnown RBP3.23□□□□□ -1.89
SNCA-213ENST00000618500 FLOT2Q14254 428 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 C6orf201Q7Z4U5 140 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 OR10J5Q8NHC4 309 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 TMEM70Q9BUB7 260 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 PECRQ9BY49 303 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 FAM212BQ9NTI7 297 aaPredicted RBP3.23□□□□□ -1.89
SNCA-213ENST00000618500 RBMX2Q9Y388 322 aaKnown RBP3.23□□□□□ -1.89
SNCA-213ENST00000618500 F11RQ9Y624 299 aaKnown RBP3.23□□□□□ -1.89
SNCA-213ENST00000618500 INS-IGF2F8WCM5 200 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 M0R2N4 97 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 OXTP01178 125 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 IGLV2-14P01704 120 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 ALPLP05186 524 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 FCGR3AP08637 254 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 AREGP15514 252 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 ARL6IP1Q15041 203 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 OGFRL1Q5TC84 451 aaPredicted RBP3.23□□□□□ -1.89
SNCA-213ENST00000618500 JAGN1Q8N5M9 183 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 OR56B1Q8NGI3 324 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 CENPNQ96H22 339 aaPredicted RBP3.23□□□□□ -1.89
SNCA-213ENST00000618500 GINS3Q9BRX5 216 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 RHPN1-AS1Q9BWJ2 59 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 NXF2Q9GZY0 626 aaKnown RBP3.23□□□□□ -1.89
SNCA-213ENST00000618500 MS4A6AQ9H2W1 248 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 C21orf62Q9NYP8 219 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 DKK2Q9UBU2 259 aa3.23□□□□□ -1.89
SNCA-213ENST00000618500 SAC3D1A6NKF1 404 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 H3BNG1 76 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 UPK2O00526 184 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 BAG2O95816 211 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 SERPINE2P07093 398 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 TIMM50Q3ZCQ8 353 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 C5orf24Q7Z6I8 188 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 DRAXINQ8NBI3 349 aaPredicted RBP3.22□□□□□ -1.89
SNCA-213ENST00000618500 GGHQ92820 318 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 RNF2Q99496 336 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 NIPSNAP3BQ9BS92 247 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 YTHDF1Q9BYJ9 559 aaKnown RBP3.22□□□□□ -1.89
SNCA-213ENST00000618500 PLEKHJ1Q9NW61 149 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 SCO2A0A1W2PP80 73 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 HMX3A6NHT5 357 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 K7EIM0 57 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 CTSGP08311 255 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 HTR2CP28335 458 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 ARPC4P59998 168 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 C10orf55Q5SWW7 151 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 OR2G6Q5TZ20 316 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 Q6ZRN7 208 aaPredicted RBP3.22□□□□□ -1.89
SNCA-213ENST00000618500 KCTD9Q7L273 389 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 QTRT1Q9BXR0 403 aaKnown RBP3.22□□□□□ -1.89
SNCA-213ENST00000618500 MAGT1Q9H0U3 335 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 CDIP1Q9H305 208 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 POMPQ9Y244 141 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 TMED3Q9Y3Q3 217 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 ORC6Q9Y5N6 252 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 TRAV14DV4A0A0A6YYC5 116 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 A0A1W2PS18 150 aa3.22□□□□□ -1.89
SNCA-213ENST00000618500 LYRM9A8MSI8 78 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms