RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 PAFAH1B2P68402 229 aa11.62□□□□□ -0.55
CIITA-213ENST00000618327 OR4X1Q8NH49 305 aa11.62□□□□□ -0.55
CIITA-213ENST00000618327 GNLYP22749 145 aa11.62□□□□□ -0.55
CIITA-213ENST00000618327 SRSF9Q13242 221 aaKnown RBP eCLIP11.62□□□□□ -0.55
CIITA-213ENST00000618327 NUP37Q8NFH4 326 aa11.62□□□□□ -0.55
CIITA-213ENST00000618327 SMIM8Q96KF7 97 aa11.62□□□□□ -0.55
CIITA-213ENST00000618327 USF3Q68DE3 2245 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 MPTX1A8MV57 137 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 SIAH2O43255 324 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 RIGQ13278 110 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 HCP5Q6MZN7 132 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 HSPB9Q9BQS6 159 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 HSPB8Q9UJY1 196 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 IGSF23A1L1A6 192 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 IGFL2Q6UWQ7 119 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 MARVELD3Q96A59 401 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 ATG101Q9BSB4 218 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 SLC25A33Q9BSK2 321 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 ISLRO14498 428 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 PSPNO60542 156 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 YPEL1O60688 119 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 MPDU1O75352 247 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 YPEL2Q96QA6 119 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 KIAA2026Q5HYC2 2103 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 GTF3C1Q12789 2109 aa11.61□□□□□ -0.55
CIITA-213ENST00000618327 DPRXA6NFQ7 191 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 MFSD2BA6NFX1 497 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 C1QTNF9BB2RNN3 333 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 MLNRO43193 412 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 GCGP01275 180 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 C1QTNF9P0C862 333 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 CFPP27918 469 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 GPR61Q9BZJ8 451 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 TMEM131Q92545 1883 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 C1QL1O75973 258 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 CEACAM8P31997 349 aaPredicted RBP11.6□□□□□ -0.55
CIITA-213ENST00000618327 C16orf82Q7Z2V1 217 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 Q8WTZ3 238 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 CEACAM18A8MTB9 384 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 PCP4P48539 62 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 MFAP2P55001 183 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 RSPO1Q2MKA7 263 aaPredicted RBP11.6□□□□□ -0.55
CIITA-213ENST00000618327 EIF4E3Q8N5X7 224 aaKnown RBP11.6□□□□□ -0.55
CIITA-213ENST00000618327 TAF15Q92804 592 aaKnown RBP eCLIP11.6□□□□□ -0.55
CIITA-213ENST00000618327 QTRT1Q9BXR0 403 aaKnown RBP11.6□□□□□ -0.55
CIITA-213ENST00000618327 UFC1Q9Y3C8 167 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 TMEM56-RWDD3S4R434 201 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 MED13Q9UHV7 2174 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 NAPSAO96009 420 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 APCSP02743 223 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 HIST1H1EP10412 219 aaKnown RBP11.6□□□□□ -0.55
CIITA-213ENST00000618327 LCN2P80188 198 aa11.6□□□□□ -0.55
CIITA-213ENST00000618327 SRSF7Q16629 238 aaKnown RBP eCLIP11.6□□□□□ -0.55
CIITA-213ENST00000618327 OSR1Q8TAX0 266 aaPredicted RBP11.6□□□□□ -0.55
CIITA-213ENST00000618327 ZNF503-AS2A6NEH8 195 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 MORN2Q502X0 79 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 C10orf113Q5VZT2 155 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 OR4A47Q6IF82 309 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 ASCL4Q6XD76 172 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 RTN4RL2Q86UN3 420 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 LHFPL1Q86WI0 220 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 LDLRAD3Q86YD5 345 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 FAM222BQ8WU58 562 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 DPM3Q9P2X0 92 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 NAGKQ9UJ70 344 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 CENPFP49454 3210 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 ZNF324BQ6AW86 544 aaPredicted RBP11.59□□□□□ -0.55
CIITA-213ENST00000618327 FAM168AQ92567 244 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 PERPQ96FX8 193 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 PXMP4Q9Y6I8 212 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 THBDP07204 575 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 BMI1P35226 326 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 DGAT2L7PQ6IED9 249 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 OR8A1Q8NGG7 326 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 FAM215AQ9Y5M1 114 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 CXorf1O96002 111 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 PCSK4Q6UW60 755 aa11.59□□□□□ -0.55
CIITA-213ENST00000618327 PIEZO1Q92508 2521 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 TMEM8BA6NDV4 472 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 GAGE10A6NGK3 116 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 MSGN1A6NI15 193 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 CEACAM4O75871 244 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 SELLP14151 372 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 HERVK_113P61574 105 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 AP5S1Q9NUS5 200 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 CEP350Q5VT06 3117 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 GOSR1O95249 250 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 MT-ND6P03923 174 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 RPL30P62888 115 aaKnown RBP11.58□□□□□ -0.56
CIITA-213ENST00000618327 GRAMD2BQ96HH9 432 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 CHODLQ9H9P2 273 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 CLEC5AQ9NY25 188 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 ZNF581Q9P0T4 197 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 ADIPOQQ15848 244 aa11.58□□□□□ -0.56
CIITA-213ENST00000618327 MEF2BQ02080 365 aaPredicted RBP11.57□□□□□ -0.56
CIITA-213ENST00000618327 ZNF672Q499Z4 452 aaPredicted RBP11.57□□□□□ -0.56
CIITA-213ENST00000618327 LY6G6FQ5SQ64 297 aa11.57□□□□□ -0.56
CIITA-213ENST00000618327 CD177Q8N6Q3 437 aa11.57□□□□□ -0.56
CIITA-213ENST00000618327 OR4B1Q8NGF8 309 aa11.57□□□□□ -0.56
CIITA-213ENST00000618327 K7EM74 188 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms