RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 IGLV2-23P01705 113 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 OR8U8P0C7N1 319 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 FGF7P21781 194 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 CEBPGP53567 150 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 PRRX1P54821 245 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 SMUG1Q53HV7 270 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 AKR1C8PQ5T2L2 129 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 VMO1Q7Z5L0 202 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 CCDC28AQ8IWP9 274 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 DYNAPQ8N1N2 210 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 CLDND2Q8NHS1 167 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 SAT2Q96F10 170 aaPredicted RBP6.28□□□□□ -1.4
NEK3-207ENST00000617054 ZNF430Q9H8G1 570 aaPredicted RBP6.28□□□□□ -1.4
NEK3-207ENST00000617054 PARP11Q9NR21 331 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 CUBNO60494 3623 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 A0A1B0GW64 132 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 OVOL3O00110 214 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 FCN1O00602 326 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 TIMM23O14925 209 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 F2RL1P55085 397 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 RAB2AP61019 212 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 BLOC1S1P78537 153 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 GUCA2BQ16661 112 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 HAGHQ16775 308 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 AKIRIN2Q53H80 203 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 HIST2H2BCQ6DN03 193 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 LINC00311Q8N616 119 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 UQCC1Q9NVA1 299 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 WASHC3Q9Y3C0 194 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 TLN2Q9Y4G6 2542 aa6.27□□□□□ -1.4
NEK3-207ENST00000617054 IGHV3-21A0A0B4J1V1 117 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 RNASEK-C17orf49H0YIS7 233 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 SOX15O60248 233 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 IGHV2-5P01817 119 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 H2AFB1P0C5Y9 115 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 ZP3P21754 424 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 PPT1P50897 306 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 ZNF726P1Q15940 193 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 HCP5Q6MZN7 132 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 ACSM6Q6P461 480 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 ZNF429Q86V71 674 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 ZNF596Q8TC21 504 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 SSMEM1Q8WWF3 244 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 CIB3Q96Q77 187 aaPredicted RBP6.27□□□□□ -1.41
NEK3-207ENST00000617054 FOXA2Q9Y261 457 aaPredicted RBP6.27□□□□□ -1.41
NEK3-207ENST00000617054 MXRA5Q9NR99 2828 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 TMEM218A2RU14 115 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 CGB1A6NKQ9 187 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 FAM157AC9JC47 383 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 F8W036 122 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 IL6RP08887 468 aaPredicted RBP6.27□□□□□ -1.41
NEK3-207ENST00000617054 CD1BP29016 333 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 SNCAP37840 140 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 ATP5J2P56134 94 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 LMO4P61968 165 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 RPL8P62917 257 aaKnown RBP6.27□□□□□ -1.41
NEK3-207ENST00000617054 BTN1A1Q13410 526 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 KIR3DS1Q14943 382 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 SP5Q6BEB4 398 aaPredicted RBP6.27□□□□□ -1.41
NEK3-207ENST00000617054 SPSB3Q6PJ21 355 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 MAPK1IP1LQ8NDC0 245 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 C8orf46Q8TAG6 207 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 OSR1Q8TAX0 266 aaPredicted RBP6.27□□□□□ -1.41
NEK3-207ENST00000617054 SUN5Q8TC36 379 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 GNPNAT1Q96EK6 184 aaPredicted RBP6.27□□□□□ -1.41
NEK3-207ENST00000617054 COMMD5Q9GZQ3 224 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 TMPRSS5Q9H3S3 457 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 FBXL15Q9H469 300 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 PLEKHA3Q9HB20 300 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 ENY2Q9NPA8 101 aa6.27□□□□□ -1.41
NEK3-207ENST00000617054 GATA2P23769 480 aaPredicted RBP6.26□□□□□ -1.41
NEK3-207ENST00000617054 KRTAP10-9P60411 292 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 MRGPRG-AS1Q2M3A8 158 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 TMEM30BQ3MIR4 351 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 RUSC1-AS1Q66K80 236 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 PUSL1Q8N0Z8 303 aaKnown RBP6.26□□□□□ -1.41
NEK3-207ENST00000617054 RPP25LQ8N5L8 163 aaKnown RBP6.26□□□□□ -1.41
NEK3-207ENST00000617054 EIF4E3Q8N5X7 224 aaKnown RBP6.26□□□□□ -1.41
NEK3-207ENST00000617054 SLC24A4Q8NFF2 622 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 TNFRSF14Q92956 283 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 PINX1Q96BK5 328 aaKnown RBP6.26□□□□□ -1.41
NEK3-207ENST00000617054 ITPR2Q14571 2701 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 IGHV4-61A0A0C4DH41 118 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 LOC105371267A0A1B0GV96 52 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 hCG_1809904A0A1W2PP81 198 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 A0A1W2PPE2 198 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 A0A1W2PR64 198 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 A0A1W2PRV1 198 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 OR13C7P0DN81 318 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 NPY1RP25929 384 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 WT1-ASQ06250 92 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 HES1Q14469 280 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 FAM216AQ8WUB2 273 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 AIFM2Q9BRQ8 373 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 NPCDR1Q9BY65 106 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 SLC25A22Q9H936 323 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 PRNDQ9UKY0 176 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 KMT2BQ9UMN6 2715 aaPredicted RBP6.26□□□□□ -1.41
NEK3-207ENST00000617054 IGHV4-30-2A0A087WSY4 118 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 RAB19A4D1S5 217 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms