RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ZFAND1Q8TCF1 268 aa14.45□□□□□ -0.1
CDX1-202ENST00000616154 SCGB3A2Q96PL1 93 aa14.45□□□□□ -0.1
CDX1-202ENST00000616154 RTBDNQ9BSG5 229 aaPredicted RBP14.45□□□□□ -0.1
CDX1-202ENST00000616154 C5orf66Q9H5L9 145 aa14.45□□□□□ -0.1
CDX1-202ENST00000616154 EDA2RQ9HAV5 297 aa14.45□□□□□ -0.1
CDX1-202ENST00000616154 LCE6AA0A183 80 aa14.44□□□□□ -0.1
CDX1-202ENST00000616154 ANKRD34BA5PLL1 514 aa14.44□□□□□ -0.1
CDX1-202ENST00000616154 MSGN1A6NI15 193 aa14.44□□□□□ -0.1
CDX1-202ENST00000616154 KBTBD11O94819 623 aa14.44□□□□□ -0.1
CDX1-202ENST00000616154 MECP2P51608 486 aaKnown RBP14.44□□□□□ -0.1
CDX1-202ENST00000616154 TNXAQ16473 311 aa14.44□□□□□ -0.1
CDX1-202ENST00000616154 POU2AF1Q16633 256 aa14.44□□□□□ -0.1
CDX1-202ENST00000616154 RGS21Q2M5E4 152 aa14.44□□□□□ -0.1
CDX1-202ENST00000616154 OR2B11Q5JQS5 317 aa14.44□□□□□ -0.1
CDX1-202ENST00000616154 IL34Q6ZMJ4 242 aa14.44□□□□□ -0.1
CDX1-202ENST00000616154 USMG5Q96IX5 58 aa14.44□□□□□ -0.1
CDX1-202ENST00000616154 SPIN2AQ99865 258 aa14.44□□□□□ -0.1
CDX1-202ENST00000616154 SPIN2BQ9BPZ2 258 aa14.44□□□□□ -0.1
CDX1-202ENST00000616154 H0Y980 276 aa14.43□□□□□ -0.1
CDX1-202ENST00000616154 GPR31O00270 319 aa14.43□□□□□ -0.1
CDX1-202ENST00000616154 OR2A4O95047 310 aa14.43□□□□□ -0.1
CDX1-202ENST00000616154 FGF2P09038 288 aa14.43□□□□□ -0.1
CDX1-202ENST00000616154 OR9G9P0C7N8 305 aa14.43□□□□□ -0.1
CDX1-202ENST00000616154 MAS1LP35410 378 aa14.43□□□□□ -0.1
CDX1-202ENST00000616154 OXA1LQ15070 435 aa14.43□□□□□ -0.1
CDX1-202ENST00000616154 ZNF343Q6P1L6 599 aa14.43□□□□□ -0.1
CDX1-202ENST00000616154 ENKURQ8TC29 256 aa14.43□□□□□ -0.1
CDX1-202ENST00000616154 OR2A7Q96R45 310 aa14.43□□□□□ -0.1
CDX1-202ENST00000616154 SLC2A9Q9NRM0 540 aa14.43□□□□□ -0.1
CDX1-202ENST00000616154 PEF1Q9UBV8 284 aaKnown RBP14.43□□□□□ -0.1
CDX1-202ENST00000616154 TRBV9A0A0B4J1U6 114 aa14.42□□□□□ -0.1
CDX1-202ENST00000616154 PGAM2P15259 253 aa14.42□□□□□ -0.1
CDX1-202ENST00000616154 SYNJ2BPP57105 145 aa14.42□□□□□ -0.1
CDX1-202ENST00000616154 KLK9Q2XQG4 91 aa14.42□□□□□ -0.1
CDX1-202ENST00000616154 VKORC1L1Q8N0U8 176 aa14.42□□□□□ -0.1
CDX1-202ENST00000616154 TTC9CQ8N5M4 171 aa14.42□□□□□ -0.1
CDX1-202ENST00000616154 MARVELD1Q9BSK0 173 aa14.42□□□□□ -0.1
CDX1-202ENST00000616154 C20orf85Q9H1P6 137 aa14.42□□□□□ -0.1
CDX1-202ENST00000616154 BET1LQ9NYM9 111 aa14.42□□□□□ -0.1
CDX1-202ENST00000616154 KLK9Q9UKQ9 250 aa14.42□□□□□ -0.1
CDX1-202ENST00000616154 TEX22C9J3V5 150 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 RBMXL2O75526 392 aaKnown RBP14.41□□□□□ -0.1
CDX1-202ENST00000616154 ACTL6BO94805 426 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 HRASP01112 189 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 IL6RP08887 468 aaPredicted RBP14.41□□□□□ -0.1
CDX1-202ENST00000616154 DEFA5Q01523 94 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 DHODHQ02127 395 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 CATR1Q13166 79 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 C10orf55Q5SWW7 151 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 ZFAND6Q6FIF0 208 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 CMTM1Q8IZ96 169 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 OR4A5Q8NH83 315 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 TMEM230Q96A57 120 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 GPHA2Q96T91 129 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 PHB2Q99623 299 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 SPATA25Q9BR10 227 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 AIFM2Q9BRQ8 373 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 NUDT15Q9NV35 164 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 COA4Q9NYJ1 87 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 SIGLEC8Q9NYZ4 499 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 FLVCR2Q9UPI3 526 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 TNFSF12O43508 249 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 PGLYRP1O75594 196 aaPredicted RBP14.41□□□□□ -0.1
CDX1-202ENST00000616154 TRBV12-3P01733 135 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 CSN3P07498 182 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 PI3P19957 117 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 PIGPP57054 158 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 TAS2R31P59538 309 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 UBE2MP61081 183 aaKnown RBP14.41□□□□□ -0.1
CDX1-202ENST00000616154 SLC25A42Q86VD7 318 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 SPAG16Q8N0X2 631 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 CADM3Q8N126 398 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 CD300LFQ8TDQ1 290 aa14.41□□□□□ -0.1
CDX1-202ENST00000616154 C14orf166Q9Y224 244 aaKnown RBP14.41□□□□□ -0.1
CDX1-202ENST00000616154 A0A1B0GW64 132 aa14.4□□□□□ -0.1
CDX1-202ENST00000616154 FAM223BA6NKX1 122 aa14.4□□□□□ -0.1
CDX1-202ENST00000616154 NPIPB5A8MRT5 1133 aa14.4□□□□□ -0.1
CDX1-202ENST00000616154 HPRT1P00492 218 aa14.4□□□□□ -0.1
CDX1-202ENST00000616154 HAGHQ16775 308 aa14.4□□□□□ -0.1
CDX1-202ENST00000616154 TATDN3Q17R31 274 aa14.4□□□□□ -0.1
CDX1-202ENST00000616154 LCN12Q6JVE5 192 aa14.4□□□□□ -0.1
CDX1-202ENST00000616154 PLET1Q6UQ28 207 aa14.4□□□□□ -0.1
CDX1-202ENST00000616154 GTSCR1Q86UQ5 136 aa14.4□□□□□ -0.1
CDX1-202ENST00000616154 FAM223AQ8IWN6 122 aa14.4□□□□□ -0.1
CDX1-202ENST00000616154 CENPSQ8N2Z9 138 aa14.4□□□□□ -0.1
CDX1-202ENST00000616154 PLEKHA2Q9HB19 425 aa14.4□□□□□ -0.1
CDX1-202ENST00000616154 FAM212BQ9NTI7 297 aaPredicted RBP14.4□□□□□ -0.1
CDX1-202ENST00000616154 GAR1Q9NY12 217 aaKnown RBP14.4□□□□□ -0.1
CDX1-202ENST00000616154 ZNF257Q9Y2Q1 563 aa14.4□□□□□ -0.1
CDX1-202ENST00000616154 CRYM-AS1A6NIL9 109 aa14.39□□□□□ -0.11
CDX1-202ENST00000616154 E7EUB6 86 aa14.39□□□□□ -0.11
CDX1-202ENST00000616154 MPPED1O15442 326 aa14.39□□□□□ -0.11
CDX1-202ENST00000616154 H2AFB2P0C5Z0 115 aa14.39□□□□□ -0.11
CDX1-202ENST00000616154 RPL8P62917 257 aaKnown RBP14.39□□□□□ -0.11
CDX1-202ENST00000616154 SUPT4H1P63272 117 aaKnown RBP14.39□□□□□ -0.11
CDX1-202ENST00000616154 RPEL1Q2QD12 228 aa14.39□□□□□ -0.11
CDX1-202ENST00000616154 PHLDA2Q53GA4 152 aa14.39□□□□□ -0.11
CDX1-202ENST00000616154 TMEM128Q5BJH2 165 aa14.39□□□□□ -0.11
CDX1-202ENST00000616154 OR4A47Q6IF82 309 aa14.39□□□□□ -0.11
CDX1-202ENST00000616154 CCDC71LQ8N9Z2 235 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms