RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 METTL21EPA6NDL7 271 aa12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 C15orf62A8K5M9 175 aa12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 RTL8CO15255 209 aa12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 HLA-DMBP28068 263 aa12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 EIF4EBP1Q13541 118 aaPredicted RBP12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 TRAM1Q15629 374 aa12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 PVRIGQ6DKI7 326 aa12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 SLC25A24Q6NUK1 477 aa12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 Q6ZTC4 211 aa12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 Q8NAQ8 132 aa12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 OR10W1Q8NGF6 305 aa12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 RHPN1-AS1Q9BWJ2 59 aa12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 QTRT1Q9BXR0 403 aaKnown RBP12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 KRTAP4-5Q9BYR2 181 aa12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 C21orf62Q9NYP8 219 aa12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 PLA2G2EQ9NZK7 142 aa12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 SMPXQ9UHP9 88 aa12.53□□□□□ -0.4
CSNK1E-215ENST00000612795 IGHV3-49A0A0A0MS15 119 aa12.52□□□□□ -0.41
CSNK1E-215ENST00000612795 IGHV7-4-1A0A0J9YVY3 117 aa12.52□□□□□ -0.41
CSNK1E-215ENST00000612795 M0R2N4 97 aa12.52□□□□□ -0.41
CSNK1E-215ENST00000612795 TNFSF12O43508 249 aa12.52□□□□□ -0.41
CSNK1E-215ENST00000612795 HSMCR30P0CW71 290 aa12.52□□□□□ -0.41
CSNK1E-215ENST00000612795 RAB6AP20340 208 aa12.52□□□□□ -0.41
CSNK1E-215ENST00000612795 PSMA1P25786 263 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-215ENST00000612795 Q56UQ5 140 aa12.52□□□□□ -0.41
CSNK1E-215ENST00000612795 SPAG16Q8N0X2 631 aa12.52□□□□□ -0.41
CSNK1E-215ENST00000612795 GBGT1Q8N5D6 347 aa12.52□□□□□ -0.41
CSNK1E-215ENST00000612795 PACRGLQ8N7B6 248 aa12.52□□□□□ -0.41
CSNK1E-215ENST00000612795 TMEM116Q8NCL8 245 aa12.52□□□□□ -0.41
CSNK1E-215ENST00000612795 C8orf4Q9NR00 106 aa12.52□□□□□ -0.41
CSNK1E-215ENST00000612795 ELF5Q9UKW6 265 aaPredicted RBP12.52□□□□□ -0.41
CSNK1E-215ENST00000612795 IGHV4-28A0A0C4DH34 117 aa12.51□□□□□ -0.41
CSNK1E-215ENST00000612795 C15orf61A6NNL5 157 aa12.51□□□□□ -0.41
CSNK1E-215ENST00000612795 PTGES3LE9PB15 166 aa12.51□□□□□ -0.41
CSNK1E-215ENST00000612795 CHEK1O14757 476 aa12.51□□□□□ -0.41
CSNK1E-215ENST00000612795 OR13C7P0DN81 318 aa12.51□□□□□ -0.41
CSNK1E-215ENST00000612795 PAFAH1B2P68402 229 aa12.51□□□□□ -0.41
CSNK1E-215ENST00000612795 ARL6IP1Q15041 203 aa12.51□□□□□ -0.41
CSNK1E-215ENST00000612795 THOC7Q6I9Y2 204 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-215ENST00000612795 ATP6V0BQ99437 205 aa12.51□□□□□ -0.41
CSNK1E-215ENST00000612795 RNF126Q9BV68 326 aa12.51□□□□□ -0.41
CSNK1E-215ENST00000612795 TRAV3A0A0B4J244 114 aa12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 UPK2O00526 184 aa12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 SERPINE2P07093 398 aa12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 P0DMU3 169 aa12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 FAM231AP0DMU4 169 aa12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 FAM231CP0DMU5 169 aa12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 TAS2R31P59538 309 aa12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 RELQ04864 619 aaPredicted RBP12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 CNIH2Q6PI25 160 aa12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 POM121L12Q8N7R1 296 aa12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 DMBX1Q8NFW5 382 aa12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 SCARB1Q8WTV0 552 aa12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 SECTM1Q8WVN6 248 aa12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 ATG5Q9H1Y0 275 aa12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 TMEM140Q9NV12 185 aa12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 AGRNO00468 2067 aa12.5□□□□□ -0.41
CSNK1E-215ENST00000612795 PDCD5O14737 125 aa12.49□□□□□ -0.41
CSNK1E-215ENST00000612795 YIF1AO95070 293 aa12.49□□□□□ -0.41
CSNK1E-215ENST00000612795 AMBPP02760 352 aa12.49□□□□□ -0.41
CSNK1E-215ENST00000612795 RBMY1A1P0DJD3 496 aaKnown RBP12.49□□□□□ -0.41
CSNK1E-215ENST00000612795 RBMY1CP0DJD4 496 aa12.49□□□□□ -0.41
CSNK1E-215ENST00000612795 MIFP14174 115 aa12.49□□□□□ -0.41
CSNK1E-215ENST00000612795 NQO2P16083 231 aa12.49□□□□□ -0.41
CSNK1E-215ENST00000612795 RBMY1FQ15415 496 aaKnown RBP12.49□□□□□ -0.41
CSNK1E-215ENST00000612795 LEMD1Q68G75 181 aa12.49□□□□□ -0.41
CSNK1E-215ENST00000612795 HSD17B13Q7Z5P4 300 aaPredicted RBP12.49□□□□□ -0.41
CSNK1E-215ENST00000612795 ZNF575Q86XF7 245 aa12.49□□□□□ -0.41
CSNK1E-215ENST00000612795 STHQ8IWL8 128 aa12.49□□□□□ -0.41
CSNK1E-215ENST00000612795 IGHV3OR16-13A0A075B7E8 117 aa12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 IGHV3-74A0A0B4J1X5 117 aa12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 F8W735 103 aaPredicted RBP12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 RBFOX2O43251 390 aaKnown RBP eCLIP12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 EIF4EP06730 217 aaKnown RBP12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 TRAPPC2P0DI81 140 aa12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 TRAPPC2BP0DI82 140 aa12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 OR10A3P58181 314 aa12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 DEFB131AP59861 70 aa12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 FABP5Q01469 135 aa12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 WT1-ASQ06250 92 aa12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 CATR1Q13166 79 aa12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 NUDCD2Q8WVJ2 157 aa12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 HINT2Q9BX68 163 aa12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 DCSTAMPQ9H295 470 aa12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 CCL28Q9NRJ3 127 aa12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 F11RQ9Y624 299 aaKnown RBP12.48□□□□□ -0.41
CSNK1E-215ENST00000612795 IFITM5A6NNB3 132 aa12.47□□□□□ -0.41
CSNK1E-215ENST00000612795 DNASE2O00115 360 aaPredicted RBP12.47□□□□□ -0.41
CSNK1E-215ENST00000612795 SULT1C2O00338 296 aa12.47□□□□□ -0.41
CSNK1E-215ENST00000612795 NUPL2O15504 423 aaKnown RBP12.47□□□□□ -0.41
CSNK1E-215ENST00000612795 HPRT1P00492 218 aa12.47□□□□□ -0.41
CSNK1E-215ENST00000612795 POU2AF1Q16633 256 aa12.47□□□□□ -0.41
CSNK1E-215ENST00000612795 CDNFQ49AH0 187 aa12.47□□□□□ -0.41
CSNK1E-215ENST00000612795 HACD4Q5VWC8 232 aa12.47□□□□□ -0.41
CSNK1E-215ENST00000612795 TCF24Q7RTU0 167 aa12.47□□□□□ -0.41
CSNK1E-215ENST00000612795 SCN3BQ9NY72 215 aa12.47□□□□□ -0.41
CSNK1E-215ENST00000612795 ANXA10Q9UJ72 324 aa12.47□□□□□ -0.41
CSNK1E-215ENST00000612795 DEFB131BA0A096LNP1 70 aa12.46□□□□□ -0.41
CSNK1E-215ENST00000612795 TRAV14DV4A0A0A6YYC5 116 aa12.46□□□□□ -0.41
CSNK1E-215ENST00000612795 K7EIM0 57 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms