RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 OR1L6Q8NGR2 347 aa10.94□□□□□ -0.66
TCF3-220ENST00000611869 SMIM6P0DI80 62 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 AMTP48728 403 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 OSR1Q8TAX0 266 aaPredicted RBP10.93□□□□□ -0.66
TCF3-220ENST00000611869 DNAJC4Q9NNZ3 241 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 TMEM131Q92545 1883 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 ELOA3CA0A087WX78 387 aaPredicted RBP10.93□□□□□ -0.66
TCF3-220ENST00000611869 LOC105371267A0A1B0GV96 52 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 TMEM250H0YL14 139 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 CCDC144NLQ6NUI1 221 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 RNASEKQ6P5S7 137 aaKnown RBP10.93□□□□□ -0.66
TCF3-220ENST00000611869 NHLRC2Q8NBF2 726 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 Q8WTZ3 238 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 TRBV6-6A0A0A6YYG2 114 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 MOSP00540 346 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 C8orf88P0DMB2 117 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 COL8A1P27658 744 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 NUBP1P53384 320 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 ICAM4Q14773 271 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 FAM53AQ6NSI3 398 aaPredicted RBP10.93□□□□□ -0.66
TCF3-220ENST00000611869 Q6ZS49 121 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 SSX7Q7RTT5 188 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 LYPD6Q86Y78 171 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.93□□□□□ -0.66
TCF3-220ENST00000611869 HSPB7Q9UBY9 170 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 PITPNC1Q9UKF7 332 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 A0A1W2PNU3 283 aaPredicted RBP10.93□□□□□ -0.66
TCF3-220ENST00000611869 GCHFRP30047 84 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 WDR86Q86TI4 376 aa10.93□□□□□ -0.66
TCF3-220ENST00000611869 ATXN7O15265 892 aaPredicted RBP10.92□□□□□ -0.66
TCF3-220ENST00000611869 CD5P06127 495 aa10.92□□□□□ -0.66
TCF3-220ENST00000611869 LIPFP07098 398 aa10.92□□□□□ -0.66
TCF3-220ENST00000611869 WT1P19544 449 aaPredicted RBP10.92□□□□□ -0.66
TCF3-220ENST00000611869 ARL16Q0P5N6 197 aa10.92□□□□□ -0.66
TCF3-220ENST00000611869 TXNDC17Q9BRA2 123 aa10.92□□□□□ -0.66
TCF3-220ENST00000611869 ACACBO00763 2458 aa10.92□□□□□ -0.66
TCF3-220ENST00000611869 MKI67P46013 3256 aaKnown RBP10.92□□□□□ -0.66
TCF3-220ENST00000611869 LINC00473A8K010 186 aa10.92□□□□□ -0.66
TCF3-220ENST00000611869 SAA1P0DJI8 122 aaPredicted RBP10.92□□□□□ -0.66
TCF3-220ENST00000611869 HIST1H1BP16401 226 aaKnown RBP10.92□□□□□ -0.66
TCF3-220ENST00000611869 ATP5G3P48201 142 aa10.92□□□□□ -0.66
TCF3-220ENST00000611869 IQCJQ1A5X6 159 aa10.92□□□□□ -0.66
TCF3-220ENST00000611869 GCSAMLQ5JQS6 135 aa10.92□□□□□ -0.66
TCF3-220ENST00000611869 NOL4LQ96MY1 436 aaPredicted RBP10.92□□□□□ -0.66
TCF3-220ENST00000611869 GPR61Q9BZJ8 451 aa10.92□□□□□ -0.66
TCF3-220ENST00000611869 HIGD1AQ9Y241 93 aa10.92□□□□□ -0.66
TCF3-220ENST00000611869 IGKV1D-17A0A075B6S4 117 aa10.92□□□□□ -0.66
TCF3-220ENST00000611869 RNASE6Q93091 150 aaKnown RBP10.92□□□□□ -0.66
TCF3-220ENST00000611869 FBXL15Q9H469 300 aa10.92□□□□□ -0.66
TCF3-220ENST00000611869 DOPEY2Q9Y3R5 2298 aa10.92□□□□□ -0.66
TCF3-220ENST00000611869 PGPA6NDG6 321 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 P01737 135 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 SFTPCP11686 197 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 LYL1P12980 280 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 MEF2CQ06413 473 aaPredicted RBP10.91□□□□□ -0.66
TCF3-220ENST00000611869 WDR73Q6P4I2 378 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 A0A0G2JNJ9 132 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 CXorf65A6NEN9 183 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 AGAP20933 346 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 FXYD3Q14802 87 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 DMRTA2Q96SC8 542 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 Q9UFV3 132 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 GLRX5Q86SX6 157 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 LOC105371242A0A075B767 164 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 CGAP01215 116 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 ACAA1P09110 424 aaPredicted RBP10.91□□□□□ -0.66
TCF3-220ENST00000611869 MFAP2P55001 183 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 HLA-DRB5Q30154 266 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 Q6ZR03 302 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 OR51G1Q8NGK1 321 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 IFI27L2Q9H2X8 130 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 PRO3102Q9H379 93 aa10.91□□□□□ -0.66
TCF3-220ENST00000611869 IGKV3-7A0A075B6H7 116 aa10.9□□□□□ -0.66
TCF3-220ENST00000611869 TBR1Q16650 682 aa10.9□□□□□ -0.66
TCF3-220ENST00000611869 OR2D3Q8NGH3 330 aa10.9□□□□□ -0.66
TCF3-220ENST00000611869 WFIKKN1Q96NZ8 548 aa10.9□□□□□ -0.66
TCF3-220ENST00000611869 ANKHD1Q8IWZ3 2542 aaKnown RBP10.9□□□□□ -0.66
TCF3-220ENST00000611869 TRGC1P0CF51 173 aa10.9□□□□□ -0.66
TCF3-220ENST00000611869 AARDQ4LEZ3 155 aa10.9□□□□□ -0.66
TCF3-220ENST00000611869 FAM122AQ96E09 287 aa10.9□□□□□ -0.66
TCF3-220ENST00000611869 C15orf61A6NNL5 157 aa10.9□□□□□ -0.66
TCF3-220ENST00000611869 SLC31A2O15432 143 aa10.9□□□□□ -0.66
TCF3-220ENST00000611869 CSN3P07498 182 aa10.9□□□□□ -0.66
TCF3-220ENST00000611869 SCGB2A2Q13296 93 aa10.9□□□□□ -0.66
TCF3-220ENST00000611869 CYP2G1PQ6ZSU1 146 aa10.9□□□□□ -0.66
TCF3-220ENST00000611869 RANBP2P49792 3224 aaKnown RBP10.9□□□□□ -0.67
TCF3-220ENST00000611869 TRAV3A0A0B4J244 114 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 IGHV3-35A0A0C4DH35 117 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 CORTO00230 105 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 ZNF585BQ52M93 769 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 IBA57Q5T440 356 aaKnown RBP10.89□□□□□ -0.67
TCF3-220ENST00000611869 GATAD1Q8WUU5 269 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 TMSB15BA0A087X1C1 80 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 RBFOX2O43251 390 aaKnown RBP eCLIP10.89□□□□□ -0.675e-7■■□□□ 13.9
TCF3-220ENST00000611869 RBM14Q96PK6 669 aaKnown RBP10.89□□□□□ -0.67
TCF3-220ENST00000611869 GGACTQ9BVM4 153 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 CHD7Q9P2D1 2997 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 RPUSD1Q9UJJ7 312 aaKnown RBP10.89□□□□□ -0.67
TCF3-220ENST00000611869 UPK2O00526 184 aa10.89□□□□□ -0.67
TCF3-220ENST00000611869 TNFSF13O75888 250 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms