RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 GTF3C1Q12789 2109 aa7.21□□□□□ -1.25
LIG4-204ENST00000611712 SPTAN1Q13813 2472 aaKnown RBP7.21□□□□□ -1.25
LIG4-204ENST00000611712 TRAV3A0A0B4J244 114 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 RBFOX2O43251 390 aaKnown RBP eCLIP7.21□□□□□ -1.26
LIG4-204ENST00000611712 IGKV3-15P01624 115 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 G0S2P27469 103 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 PRRX1P54821 245 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 HCP5Q6MZN7 132 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 MMD2Q8IY49 270 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 VN1R17PQ8TDU5 208 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 HSPB9Q9BQS6 159 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 SFXN3Q9BWM7 321 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 PAM16Q9Y3D7 125 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 C15orf62A8K5M9 175 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 FAM157AC9JC47 383 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 SLC25A17O43808 307 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 IGHV2-5P01817 119 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 C8orf88P0DMB2 117 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 CD40P25942 277 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 KIAA1644Q3SXP7 199 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 DOLPP1Q86YN1 238 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 NHLRC2Q8NBF2 726 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 NOL4LQ96MY1 436 aaPredicted RBP7.21□□□□□ -1.26
LIG4-204ENST00000611712 ZNF355PQ9NSJ1 428 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 ONECUT1Q9UBC0 465 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 INSIG2Q9Y5U4 225 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 PLCE1Q9P212 2302 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 WNK2Q9Y3S1 2297 aa7.21□□□□□ -1.26
LIG4-204ENST00000611712 FAM90A27PA6NNH2 459 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 DLL1O00548 723 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 IGKV1D-33P01593 117 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 IGKV1-33P01594 117 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 LYZP61626 148 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 COX19Q49B96 90 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 CENPWQ5EE01 88 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 IBA57Q5T440 356 aaKnown RBP7.2□□□□□ -1.26
LIG4-204ENST00000611712 MBNL2Q5VZF2 373 aaKnown RBP7.2□□□□□ -1.26
LIG4-204ENST00000611712 RNASEKQ6P5S7 137 aaKnown RBP7.2□□□□□ -1.26
LIG4-204ENST00000611712 MIR17HGQ75NE6 70 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 ZCCHC24Q8N2G6 241 aaKnown RBP7.2□□□□□ -1.26
LIG4-204ENST00000611712 DERL1Q9BUN8 251 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 GGTLC1Q9BX51 225 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 MRPL37Q9BZE1 423 aaKnown RBP7.2□□□□□ -1.26
LIG4-204ENST00000611712 ABCA4P78363 2273 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 C15orf61A6NNL5 157 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 M0R143 59 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 IGHG3P01860 377 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 CD3EP07766 207 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 LMO1P25800 156 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 MFAP2P55001 183 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 Q6ZR03 302 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.2□□□□□ -1.26
LIG4-204ENST00000611712 TMEM170AQ8WVE7 144 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 IMMP2LQ96T52 175 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 SEBOXQ9HB31 216 aaPredicted RBP7.2□□□□□ -1.26
LIG4-204ENST00000611712 DNAJC4Q9NNZ3 241 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 NAGKQ9UJ70 344 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 IGKV1D-17A0A075B6S4 117 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 CT45A10P0DMU9 189 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 TDGF1P13385 188 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 RND2P52198 227 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 SSX7Q7RTT5 188 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 NPIPB3Q92617 1050 aa7.2□□□□□ -1.26
LIG4-204ENST00000611712 REG1AP05451 166 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 NUBP1P53384 320 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 OR5I1Q13606 314 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 TCF23Q7RTU1 214 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 FAM122AQ96E09 287 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 DIRC2Q96SL1 478 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 PARD6GQ9BYG4 376 aaPredicted RBP7.19□□□□□ -1.26
LIG4-204ENST00000611712 SLC25A15Q9Y619 301 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 EFNB3Q15768 340 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 LINC01551Q86U37 167 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 OR4C13Q8NGP0 309 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 OCC1Q8TAD7 63 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 PERPQ96FX8 193 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 ASCL3Q9NQ33 180 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 ZFHX2Q9C0A1 2572 aaPredicted RBP7.19□□□□□ -1.26
LIG4-204ENST00000611712 A0A1W2PRD5 423 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 A0A1W2PRF3 423 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 A0A1W2PRM7 423 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 SLC31A2O15432 143 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 CCL3L1P16619 93 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 BRS3P32247 399 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 PAFAH1B2P68402 229 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 ASCL5Q7RTU5 278 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 ZNF430Q9H8G1 570 aaPredicted RBP7.19□□□□□ -1.26
LIG4-204ENST00000611712 WASHC3Q9Y3C0 194 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 TRAV34A0A0B4J273 112 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 APCSP02743 223 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 AMBPP02760 352 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 RPL27AP46776 148 aaKnown RBP7.19□□□□□ -1.26
LIG4-204ENST00000611712 REC114Q7Z4M0 266 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 OR52E5Q8NH55 327 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 SGK494Q96LW2 274 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 AGMATQ9BSE5 352 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 IFI27L2Q9H2X8 130 aa7.19□□□□□ -1.26
LIG4-204ENST00000611712 AMMECR1Q9Y4X0 333 aaPredicted RBP7.19□□□□□ -1.26
LIG4-204ENST00000611712 GFRA3O60609 400 aa7.18□□□□□ -1.26
LIG4-204ENST00000611712 MT-ND6P03923 174 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms