RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	KHDC1L	Q5JSQ8	128 aa		11.64	□□□□□ -0.55
MUC1-223	ENST00000611571	ACP7	Q6ZNF0	438 aa		11.64	□□□□□ -0.55
MUC1-223	ENST00000611571	HIST1H2BL	Q99880	126 aa		11.64	□□□□□ -0.55
MUC1-223	ENST00000611571	UFC1	Q9Y3C8	167 aa		11.64	□□□□□ -0.55
MUC1-223	ENST00000611571	TNC	P24821	2201 aa		11.64	□□□□□ -0.55
MUC1-223	ENST00000611571	IGHV3OR16-8	A0A075B7F1	116 aa		11.64	□□□□□ -0.55
MUC1-223	ENST00000611571	HIST1H1E	P10412	219 aa	Known RBP	11.64	□□□□□ -0.55
MUC1-223	ENST00000611571	C1QL4	Q86Z23	238 aa		11.64	□□□□□ -0.55
MUC1-223	ENST00000611571	RNASE7	Q9H1E1	156 aa	Known RBP	11.64	□□□□□ -0.55
MUC1-223	ENST00000611571	DYSF	O75923	2080 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	IGLV3-32	A0A0A0MS00	114 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	SIAH2	O43255	324 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	ANOS1	P23352	680 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	PRRX1	P54821	245 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	HERPUD1	Q15011	391 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	SPSB4	Q96A44	273 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	LOC102723996	A0A087X1L8	192 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	PRR33	A8MZF0	331 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	SNAI2	O43623	268 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	TMEM50A	O95807	157 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	UQCRFS1	P47985	274 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	RPL30	P62888	115 aa	Known RBP	11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	RELB	Q01201	579 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	FAM162B	Q5T6X4	162 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	MIR17HG	Q75NE6	70 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	TMEM191A	Q9H0A3	160 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	TNFRSF19	Q9NS68	423 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	IGHV3OR16-13	A0A075B7E8	117 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	IGHV3-74	A0A0B4J1X5	117 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	C9orf172	C9J069	976 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	CA1	P00915	261 aa	Predicted RBP	11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	IGKV1-5	P01602	117 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	GPR6	P46095	362 aa	Predicted RBP	11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	PCSK4	Q6UW60	755 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	RNF166	Q96A37	237 aa	Predicted RBP	11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	ZNF714	Q96N38	554 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	GSX1	Q9H4S2	264 aa	Predicted RBP	11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	DNAJC4	Q9NNZ3	241 aa		11.63	□□□□□ -0.55
MUC1-223	ENST00000611571	HYPM	O75409	117 aa		11.62	□□□□□ -0.55
MUC1-223	ENST00000611571	ZNF324B	Q6AW86	544 aa	Predicted RBP	11.62	□□□□□ -0.55
MUC1-223	ENST00000611571		Q6ZT83	130 aa		11.62	□□□□□ -0.55
MUC1-223	ENST00000611571	WDYHV1	Q96HA8	205 aa		11.62	□□□□□ -0.55
MUC1-223	ENST00000611571	LINC00470	Q9BZP3	86 aa		11.62	□□□□□ -0.55
MUC1-223	ENST00000611571	C8orf88	P0DMB2	117 aa		11.62	□□□□□ -0.55
MUC1-223	ENST00000611571	RPL24	P83731	157 aa	Known RBP	11.62	□□□□□ -0.55
MUC1-223	ENST00000611571	COL5A1-AS1	Q5SY13	56 aa		11.62	□□□□□ -0.55
MUC1-223	ENST00000611571	PERP	Q96FX8	193 aa		11.62	□□□□□ -0.55
MUC1-223	ENST00000611571	FTH1P19	P0C7X4	201 aa		11.62	□□□□□ -0.55
MUC1-223	ENST00000611571	RPL27A	P46776	148 aa	Known RBP	11.62	□□□□□ -0.55
MUC1-223	ENST00000611571	RALY	Q9UKM9	306 aa	Known RBP	11.62	□□□□□ -0.55
MUC1-223	ENST00000611571	OR4A8	P0C604	315 aa		11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	PAFAH1B2	P68402	229 aa		11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	SLC35E4	Q6ICL7	350 aa		11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	SELENOK	Q9Y6D0	94 aa		11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	ACP1	P24666	158 aa		11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	CD40	P25942	277 aa		11.61	□□□□□ -0.55
MUC1-223	ENST00000611571		Q0VFX4	171 aa		11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	TMEM177	Q53S58	311 aa		11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	NMS	Q5H8A3	153 aa		11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	LRTM2	Q8N967	370 aa		11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	SON	P18583	2426 aa	Known RBP	11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	PCDH15	Q96QU1	1955 aa		11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	SERF1A	O75920	110 aa		11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	OR4A47	Q6IF82	309 aa		11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	OCC1	Q8TAD7	63 aa		11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	METRN	Q9UJH8	293 aa		11.61	□□□□□ -0.55
MUC1-223	ENST00000611571	ISLR	O14498	428 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	CD3E	P07766	207 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	KIR3DL3	Q8N743	410 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571		A0A087WWC5	75 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	CD99	P14209	185 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	CCL3L1	P16619	93 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	TMEM45B	Q96B21	275 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	NTF4	P34130	210 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	HIST3H2BB	Q8N257	126 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	PLXNB1	O43157	2135 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	PLXNA4	Q9HCM2	1894 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	TEX50	A0A1B0GTY4	177 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	MYOD1	P15172	320 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	C9orf106	Q8NAJ2	232 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	OR8B2	Q96RD0	313 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	PMCHL2	Q9BQD1	86 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	MAP1LC3C	Q9BXW4	147 aa		11.6	□□□□□ -0.55
MUC1-223	ENST00000611571	C5orf42	Q9H799	3197 aa		11.59	□□□□□ -0.55
MUC1-223	ENST00000611571		A8MWL6	223 aa		11.59	□□□□□ -0.55
MUC1-223	ENST00000611571	OR9G9	P0C7N8	305 aa		11.59	□□□□□ -0.55
MUC1-223	ENST00000611571	SRSF4	Q08170	494 aa	Known RBP	11.59	□□□□□ -0.55
MUC1-223	ENST00000611571	TMEM256	Q8N2U0	113 aa		11.59	□□□□□ -0.55
MUC1-223	ENST00000611571	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.59	□□□□□ -0.55
MUC1-223	ENST00000611571	JPT1	Q9UK76	154 aa		11.59	□□□□□ -0.55
MUC1-223	ENST00000611571	TBL2	Q9Y4P3	447 aa	Known RBP	11.59	□□□□□ -0.55
MUC1-223	ENST00000611571	AMBP	P02760	352 aa		11.59	□□□□□ -0.55
MUC1-223	ENST00000611571	TFPI2	P48307	235 aa		11.59	□□□□□ -0.55
MUC1-223	ENST00000611571	MYO9A	B2RTY4	2548 aa		11.59	□□□□□ -0.55
MUC1-223	ENST00000611571	IGKV1-6	A0A0C4DH72	117 aa		11.59	□□□□□ -0.55
MUC1-223	ENST00000611571		A0A1B0GUS0	222 aa		11.59	□□□□□ -0.55
MUC1-223	ENST00000611571	IFITM10	A6NMD0	228 aa		11.59	□□□□□ -0.55
MUC1-223	ENST00000611571	CEACAM1	P13688	526 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms