RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 HMX3A6NHT5 357 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 MSGN1A6NI15 193 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 ACTL6BO94805 426 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 ELANEP08246 267 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 AREGP15514 252 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 MYCNOSP40205 109 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 CDX1P47902 265 aaPredicted RBP6.69□□□□□ -1.34
SNCA-212ENST00000611107 RAB9AP51151 201 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 UBE2MP61081 183 aaKnown RBP6.69□□□□□ -1.34
SNCA-212ENST00000611107 EGFEM1PQ0D2K5 195 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 FHL3Q13643 280 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 ANKRD55Q3KP44 614 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 TMEM128Q5BJH2 165 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 CXorf66Q5JRM2 361 aaPredicted RBP6.69□□□□□ -1.34
SNCA-212ENST00000611107 TMEM268Q5VZI3 342 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 SLC25A42Q86VD7 318 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 SELENOHQ8IZQ5 122 aaKnown RBP6.69□□□□□ -1.34
SNCA-212ENST00000611107 COMMD1Q8N668 190 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 SLC35G3Q8N808 338 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 OR5M8Q8NGP6 311 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 TMEM56Q96MV1 263 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 MS4A10Q96PG2 267 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 PHB2Q99623 299 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 NUDT15Q9NV35 164 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 TMEM56-RWDD3S4R434 201 aa6.69□□□□□ -1.34
SNCA-212ENST00000611107 TRAV6A0A075B6T7 132 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 IGHV4OR15-8A0A075B7B6 117 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 A0A087WW49 117 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 SFT2D2O95562 160 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 IGHV3-11P01762 117 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 HLA-AP01891 365 aaKnown RBP6.68□□□□□ -1.34
SNCA-212ENST00000611107 TCRBP04435 133 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 ANXA7P20073 488 aaKnown RBP6.68□□□□□ -1.34
SNCA-212ENST00000611107 VAMP1P23763 118 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 SLURP1P55000 103 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 RAB25P57735 213 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 TMEM267Q0VDI3 215 aaPredicted RBP6.68□□□□□ -1.34
SNCA-212ENST00000611107 DHRS2Q13268 280 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 NMSQ5H8A3 153 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 Q6ZRM9 215 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 H2BFWTQ7Z2G1 175 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 OR5T1Q8NG75 326 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 OR10W1Q8NGF6 305 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 MRAPQ8TCY5 172 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 C4orf3Q8WVX3 66 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 IL22RA2Q969J5 263 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 RCC1LQ96I51 464 aaKnown RBP6.68□□□□□ -1.34
SNCA-212ENST00000611107 FYTTD1Q96QD9 318 aaKnown RBP6.68□□□□□ -1.34
SNCA-212ENST00000611107 TSC22D3Q99576 134 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 SPIN2AQ99865 258 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 SPIN2BQ9BPZ2 258 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 QTRT1Q9BXR0 403 aaKnown RBP6.68□□□□□ -1.34
SNCA-212ENST00000611107 COMMD5Q9GZQ3 224 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 PRNDQ9UKY0 176 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 OR51B2Q9Y5P1 312 aa6.68□□□□□ -1.34
SNCA-212ENST00000611107 A0A0B4J293 547 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 A0A0B4J2A0 478 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 TEX50A0A1B0GTY4 177 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 C9orf170A2RU37 121 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 NPIPB5A8MRT5 1133 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 H3BUA1 57 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 TRBV12-3P01733 135 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 REG1AP05451 166 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 OR4E1P0C645 316 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 ANXA3P12429 323 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 TPPP2P59282 170 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 SRPXP78539 464 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 WT1-ASQ06250 92 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 AARDQ4LEZ3 155 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 THOC7Q6I9Y2 204 aaKnown RBP6.67□□□□□ -1.34
SNCA-212ENST00000611107 LYZL2Q7Z4W2 148 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 NRARPQ7Z6K4 114 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 HAPLN4Q86UW8 402 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 ZNF429Q86V71 674 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 FAM219AQ8IW50 185 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 LGI3Q8N145 548 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 LRTM2Q8N967 370 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 OR11H1Q8NG94 326 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 OR52B4Q8NGK2 314 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 OR1L8Q8NGR8 309 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 OR5B3Q8NH48 314 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 RNASE11Q8TAA1 199 aaKnown RBP6.67□□□□□ -1.34
SNCA-212ENST00000611107 DCUN1D4Q92564 292 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 LSM10Q969L4 123 aaKnown RBP6.67□□□□□ -1.34
SNCA-212ENST00000611107 GPR146Q96CH1 333 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 TMEM68Q96MH6 324 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 NDUFA4L2Q9NRX3 87 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 COA4Q9NYJ1 87 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 CACNG5Q9UF02 275 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 SHPKQ9UHJ6 478 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 ZNF257Q9Y2Q1 563 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 DMRT1Q9Y5R6 373 aa6.67□□□□□ -1.34
SNCA-212ENST00000611107 COL7A1Q02388 2944 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 FAM240BA0A1B0GVZ2 78 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 DUXBA0A1W2PPF3 345 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 ST8SIA3O43173 380 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 SNAPC5O75971 98 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 ATG12O94817 140 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 BRI3O95415 125 aa6.66□□□□□ -1.34
SNCA-212ENST00000611107 PRH1P02810 166 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms