RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 TRAPPC2P0DI81 140 aa9.96□□□□□ -0.82
POLR2J3-219ENST00000608621 TRAPPC2BP0DI82 140 aa9.96□□□□□ -0.82
POLR2J3-219ENST00000608621 OR13C7P0DN81 318 aa9.96□□□□□ -0.82
POLR2J3-219ENST00000608621 AADACL3Q5VUY0 350 aa9.96□□□□□ -0.82
POLR2J3-219ENST00000608621 TMEM17Q86X19 198 aa9.96□□□□□ -0.82
POLR2J3-219ENST00000608621 CD300LFQ8TDQ1 290 aa9.96□□□□□ -0.82
POLR2J3-219ENST00000608621 VN1R17PQ8TDU5 208 aa9.96□□□□□ -0.82
POLR2J3-219ENST00000608621 QTRT1Q9BXR0 403 aaKnown RBP9.96□□□□□ -0.82
POLR2J3-219ENST00000608621 YTHDF1Q9BYJ9 559 aaKnown RBP9.96□□□□□ -0.82
POLR2J3-219ENST00000608621 C5orf66Q9H5L9 145 aa9.96□□□□□ -0.82
POLR2J3-219ENST00000608621 IGHV3-21A0A0B4J1V1 117 aa9.95□□□□□ -0.82
POLR2J3-219ENST00000608621 A0A0J9YWU9 116 aa9.95□□□□□ -0.82
POLR2J3-219ENST00000608621 LOC100506127A0A0U1RQW1 187 aa9.95□□□□□ -0.82
POLR2J3-219ENST00000608621 OR2T8A6NH00 312 aa9.95□□□□□ -0.82
POLR2J3-219ENST00000608621 CYB5BO43169 146 aa9.95□□□□□ -0.82
POLR2J3-219ENST00000608621 SPRY2O43597 315 aa9.95□□□□□ -0.82
POLR2J3-219ENST00000608621 GNRHRP30968 328 aa9.95□□□□□ -0.82
POLR2J3-219ENST00000608621 CBX5P45973 191 aa9.95□□□□□ -0.82
POLR2J3-219ENST00000608621 EWSR1Q01844 656 aaKnown RBP eCLIP9.95□□□□□ -0.82
POLR2J3-219ENST00000608621 WT1-ASQ06250 92 aa9.95□□□□□ -0.82
POLR2J3-219ENST00000608621 PMS2P11Q13670 270 aa9.95□□□□□ -0.82
POLR2J3-219ENST00000608621 WFDC3Q8IUB2 231 aa9.95□□□□□ -0.82
POLR2J3-219ENST00000608621 GDPD1Q8N9F7 314 aa9.95□□□□□ -0.82
POLR2J3-219ENST00000608621 SPAG8Q99932 426 aaPredicted RBP9.95□□□□□ -0.82
POLR2J3-219ENST00000608621 CXorf65A6NEN9 183 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 TSPAN4O14817 238 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 LY6G6CO95867 125 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 FGF2P09038 288 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 LPAR6P43657 344 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 RFX2P48378 723 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 MFAP2P55001 183 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 APOC4P55056 127 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 HERV-K104P61576 105 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 LAMTOR1Q6IAA8 161 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 DHRS11Q6UWP2 260 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 OR1L8Q8NGR8 309 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 TMEM190Q8WZ59 177 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 LINC00476Q8WZB0 136 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 CHRDL1Q9BU40 450 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 HINT2Q9BX68 163 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 EHFQ9NZC4 300 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 COMMD9Q9P000 198 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 TP53TG1Q9Y2A0 90 aa9.94□□□□□ -0.82
POLR2J3-219ENST00000608621 MARCH11A6NNE9 402 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 NDUFA4O00483 81 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 PGLYRP1O75594 196 aaPredicted RBP9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 KRASP01116 189 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 F2RP25116 425 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 BMI1P35226 326 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 ERVK-16P61578 105 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 TNFRSF9Q07011 255 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 DEFB135Q30KP9 77 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 THOC7Q6I9Y2 204 aaKnown RBP9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 SPSB3Q6PJ21 355 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 Q6ZWC4 215 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 HSD17B13Q7Z5P4 300 aaPredicted RBP9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 LYG2Q86SG7 212 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 SCARB1Q8WTV0 552 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 BORCS5Q969J3 196 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 BSCL2Q96G97 398 aaPredicted RBP9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 C20orf24Q9BUV8 137 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 IFT46Q9NQC8 304 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 DAZ1Q9NQZ3 744 aaKnown RBP9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 NDUFA4L2Q9NRX3 87 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 NSG2Q9Y328 171 aa9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 F11RQ9Y624 299 aaKnown RBP9.93□□□□□ -0.82
POLR2J3-219ENST00000608621 IGHV3OR16-8A0A075B7F1 116 aa9.92□□□□□ -0.82
POLR2J3-219ENST00000608621 UBE2CO00762 179 aa9.92□□□□□ -0.82
POLR2J3-219ENST00000608621 XRCC3O43542 346 aa9.92□□□□□ -0.82
POLR2J3-219ENST00000608621 ZNF207O43670 478 aaKnown RBP9.92□□□□□ -0.82
POLR2J3-219ENST00000608621 PMP2P02689 132 aa9.92□□□□□ -0.82
POLR2J3-219ENST00000608621 RLN1P04808 185 aa9.92□□□□□ -0.82
POLR2J3-219ENST00000608621 ADMP35318 185 aa9.92□□□□□ -0.82
POLR2J3-219ENST00000608621 ODF3L2Q3SX64 289 aa9.92□□□□□ -0.82
POLR2J3-219ENST00000608621 STPG3Q8N7X2 389 aa9.92□□□□□ -0.82
POLR2J3-219ENST00000608621 FCAMRQ8WWV6 532 aa9.92□□□□□ -0.82
POLR2J3-219ENST00000608621 S100A16Q96FQ6 103 aaKnown RBP9.92□□□□□ -0.82
POLR2J3-219ENST00000608621 ZNF2Q9BSG1 426 aaPredicted RBP9.92□□□□□ -0.82
POLR2J3-219ENST00000608621 Q9H521 79 aa9.92□□□□□ -0.82
POLR2J3-219ENST00000608621 C21orf62Q9NYP8 219 aa9.92□□□□□ -0.82
POLR2J3-219ENST00000608621 OR51B2Q9Y5P1 312 aa9.92□□□□□ -0.82
POLR2J3-219ENST00000608621 NUPR2A6NF83 97 aa9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 F8W735 103 aaPredicted RBP9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 K7EIM0 57 aa9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 K7EMT4 169 aa9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 SNAPC5O75971 98 aa9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 ATP6V1G2O95670 118 aa9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 CTSDP07339 412 aaPredicted RBP9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 RPL35AP18077 110 aaKnown RBP9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 G6PCP35575 357 aa9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 NEDD8Q15843 81 aa9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 Q56UQ5 140 aa9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 CEMP1Q6PRD7 247 aaPredicted RBP9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 UBAC2Q8NBM4 344 aa9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 LSM10Q969L4 123 aaKnown RBP9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 MOB3AQ96BX8 217 aa9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 RNF183Q96D59 192 aa9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 DGCR14Q96DF8 476 aaKnown RBP9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 ATP6V0BQ99437 205 aa9.91□□□□□ -0.82
POLR2J3-219ENST00000608621 KIR2DL5BA0A0G2JN68 375 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms