RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 RAB9BQ9NP90 201 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 VAX2Q9UIW0 290 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 ZFHX3Q15911 3703 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 TEX50A0A1B0GTY4 177 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 APOA2P02652 100 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 CXCL1P09341 107 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 GNB1P62873 340 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 SEPSECSQ9HD40 501 aaKnown RBP12.92□□□□□ -0.34
CTSA-214ENST00000606788 TMEM14BQ9NUH8 114 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 B9A039 149 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 C17orf112F2Z3M2 114 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 H0YJW9 148 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 FOXH1O75593 365 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 RAB5AP20339 215 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 MEF2BQ02080 365 aaPredicted RBP12.92□□□□□ -0.34
CTSA-214ENST00000606788 DPPA3Q6W0C5 159 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 FLYWCH2Q96CP2 140 aaKnown RBP12.92□□□□□ -0.34
CTSA-214ENST00000606788 C1orf159Q96HA4 380 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 GGTLC1Q9BX51 225 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 ONECUT1Q9UBC0 465 aa12.92□□□□□ -0.34
CTSA-214ENST00000606788 POLQO75417 2590 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 KBTBD11O94819 623 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 ARL14EPLP0DKL9 152 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 KIR2DS2P43631 304 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 PSMB3P49720 205 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 B2MP61769 119 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 FLI1Q01543 452 aaPredicted RBP12.91□□□□□ -0.34
CTSA-214ENST00000606788 ZNF672Q499Z4 452 aaPredicted RBP12.91□□□□□ -0.34
CTSA-214ENST00000606788 C4orf17Q53FE4 359 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 WDR25Q64LD2 544 aaPredicted RBP12.91□□□□□ -0.34
CTSA-214ENST00000606788 OR10A7Q8NGE5 316 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 Q8WTZ3 238 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 CORO2AQ92828 525 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 COMMD5Q9GZQ3 224 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 DOK5Q9P104 306 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 C1orf196B1AJZ1 125 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 UPK2O00526 184 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 CDKN1AP38936 164 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 RHEBQ15382 184 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 HCP5Q6MZN7 132 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 TGIF2LXQ8IUE1 241 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 C15orf54Q8N8G6 183 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 OR9G1Q8NH87 305 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 OR2T6Q8NHC8 308 aa12.91□□□□□ -0.34
CTSA-214ENST00000606788 USP9XQ93008 2570 aaPredicted RBP12.91□□□□□ -0.34
CTSA-214ENST00000606788 CYB5BO43169 146 aa12.9□□□□□ -0.34
CTSA-214ENST00000606788 SOD3P08294 240 aa12.9□□□□□ -0.34
CTSA-214ENST00000606788 ACOT6Q3I5F7 207 aaPredicted RBP12.9□□□□□ -0.34
CTSA-214ENST00000606788 UNKLQ9H9P5 680 aaKnown RBP12.9□□□□□ -0.34
CTSA-214ENST00000606788 IGSF10Q6WRI0 2623 aa12.9□□□□□ -0.34
CTSA-214ENST00000606788 TRAV1-1A0A0B4J248 108 aa12.9□□□□□ -0.34
CTSA-214ENST00000606788 A0A1B0GW64 132 aa12.9□□□□□ -0.34
CTSA-214ENST00000606788 S100A6P06703 90 aa12.9□□□□□ -0.34
CTSA-214ENST00000606788 IGHV1-8P0DP01 117 aa12.9□□□□□ -0.34
CTSA-214ENST00000606788 ARF6P62330 175 aa12.9□□□□□ -0.34
CTSA-214ENST00000606788 CSMD2Q7Z408 3487 aa12.9□□□□□ -0.34
CTSA-214ENST00000606788 STPG3Q8N7X2 389 aa12.9□□□□□ -0.34
CTSA-214ENST00000606788 IFNA1P01562 189 aa12.9□□□□□ -0.35
CTSA-214ENST00000606788 CTRB1P17538 263 aa12.9□□□□□ -0.35
CTSA-214ENST00000606788 RPP30P78346 268 aaKnown RBP12.9□□□□□ -0.35
CTSA-214ENST00000606788 SSBP2P81877 361 aaPredicted RBP12.9□□□□□ -0.35
CTSA-214ENST00000606788 RNF212Q495C1 297 aa12.9□□□□□ -0.35
CTSA-214ENST00000606788 CTRB2Q6GPI1 263 aa12.9□□□□□ -0.35
CTSA-214ENST00000606788 C11orf94C9JXX5 98 aa12.89□□□□□ -0.35
CTSA-214ENST00000606788 MT-ND4LP03901 98 aa12.89□□□□□ -0.35
CTSA-214ENST00000606788 IL6RP08887 468 aaPredicted RBP12.89□□□□□ -0.35
CTSA-214ENST00000606788 PRB4P10163 310 aaPredicted RBP12.89□□□□□ -0.35
CTSA-214ENST00000606788 RAB5BP61020 215 aa12.89□□□□□ -0.35
CTSA-214ENST00000606788 SLC35E3Q7Z769 313 aa12.89□□□□□ -0.35
CTSA-214ENST00000606788 ADTRPQ96IZ2 230 aa12.89□□□□□ -0.35
CTSA-214ENST00000606788 PARLQ9H300 379 aa12.89□□□□□ -0.35
CTSA-214ENST00000606788 FOXA2Q9Y261 457 aaPredicted RBP12.89□□□□□ -0.35
CTSA-214ENST00000606788 IGKV1OR2-108A0A075B7D4 117 aa12.89□□□□□ -0.35
CTSA-214ENST00000606788 UCNP55089 124 aa12.89□□□□□ -0.35
CTSA-214ENST00000606788 MEF2CQ06413 473 aaPredicted RBP12.89□□□□□ -0.35
CTSA-214ENST00000606788 RBMS3Q6XE24 437 aaKnown RBP12.89□□□□□ -0.35
CTSA-214ENST00000606788 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.89□□□□□ -0.35
CTSA-214ENST00000606788 NABP2Q9BQ15 211 aa12.89□□□□□ -0.35
CTSA-214ENST00000606788 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.88□□□□□ -0.351e-7■■■□□ 17.5
CTSA-214ENST00000606788 A0A0U1RQK1 487 aa12.88□□□□□ -0.35
CTSA-214ENST00000606788 A0A1W2PPR1 153 aa12.88□□□□□ -0.35
CTSA-214ENST00000606788 PRSS46E5RG02 174 aa12.88□□□□□ -0.35
CTSA-214ENST00000606788 ZNF833PQ6ZTB9 187 aa12.88□□□□□ -0.35
CTSA-214ENST00000606788 PNKDQ8N490 385 aa12.88□□□□□ -0.35
CTSA-214ENST00000606788 ZNF430Q9H8G1 570 aaPredicted RBP12.88□□□□□ -0.35
CTSA-214ENST00000606788 TIMM9Q9Y5J7 89 aa12.88□□□□□ -0.35
CTSA-214ENST00000606788 HILPDAQ9Y5L2 63 aa12.88□□□□□ -0.35
CTSA-214ENST00000606788 RPL8P62917 257 aaKnown RBP12.88□□□□□ -0.35
CTSA-214ENST00000606788 KLRD1Q13241 179 aa12.88□□□□□ -0.35
CTSA-214ENST00000606788 TMEM155Q4W5P6 130 aa12.88□□□□□ -0.35
CTSA-214ENST00000606788 C11orf42Q8N5U0 333 aa12.88□□□□□ -0.35
CTSA-214ENST00000606788 ST6GALNAC3Q8NDV1 305 aa12.88□□□□□ -0.35
CTSA-214ENST00000606788 SEBOXQ9HB31 216 aaPredicted RBP12.88□□□□□ -0.35
CTSA-214ENST00000606788 NPVFQ9HCQ7 196 aa12.88□□□□□ -0.35
CTSA-214ENST00000606788 NPPCP23582 126 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 OR10J1P30954 320 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 PDZD11Q5EBL8 140 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 FAM78BQ5VT40 261 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 TEPPQ6URK8 271 aa12.87□□□□□ -0.35
CTSA-214ENST00000606788 OR4P4Q8NGL7 312 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 261.1 ms