RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 SAT2Q96F10 170 aaPredicted RBP17.3■□□□□ 0.36
USP6NL-204ENST00000606752 EAF1Q96JC9 268 aaPredicted RBP17.3■□□□□ 0.36
USP6NL-204ENST00000606752 POLQO75417 2590 aa17.29■□□□□ 0.36
USP6NL-204ENST00000606752 ANKRD17O75179 2603 aaKnown RBP17.29■□□□□ 0.36
USP6NL-204ENST00000606752 A0A1W2PN81 502 aa17.29■□□□□ 0.36
USP6NL-204ENST00000606752 E7EUB6 86 aa17.29■□□□□ 0.36
USP6NL-204ENST00000606752 MAS1LP35410 378 aa17.29■□□□□ 0.36
USP6NL-204ENST00000606752 CHRNA7P36544 502 aa17.29■□□□□ 0.36
USP6NL-204ENST00000606752 COMMD7Q86VX2 200 aa17.29■□□□□ 0.36
USP6NL-204ENST00000606752 OR2G3Q8NGZ4 309 aa17.29■□□□□ 0.36
USP6NL-204ENST00000606752 OR2T10Q8NGZ9 312 aa17.29■□□□□ 0.36
USP6NL-204ENST00000606752 UQCC1Q9NVA1 299 aa17.29■□□□□ 0.36
USP6NL-204ENST00000606752 HELZ2Q9BYK8 2649 aaKnown RBP17.29■□□□□ 0.36
USP6NL-204ENST00000606752 ACTL6BO94805 426 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 CA2P00918 260 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 IFNA4P05014 189 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 ERHP84090 104 aaKnown RBP17.28■□□□□ 0.36
USP6NL-204ENST00000606752 RUNX1Q01196 453 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 HNF4GQ14541 408 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 VWC2Q2TAL6 325 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 HIST2H2BCQ6DN03 193 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 NPBQ8NG41 125 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 OR10W1Q8NGF6 305 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 WDR61Q9GZS3 305 aaKnown RBP17.28■□□□□ 0.36
USP6NL-204ENST00000606752 FBXL15Q9H469 300 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 PFDN2Q9UHV9 154 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 TRAV20A0A0B4J274 112 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 CGB1A6NKQ9 187 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 SNRNP70P08621 437 aaKnown RBP17.28■□□□□ 0.36
USP6NL-204ENST00000606752 CD24P25063 80 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 RAB5CP51148 216 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 EBI3Q14213 229 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 HES1Q14469 280 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 MMDQ15546 238 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 C10orf55Q5SWW7 151 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 PIP4P2Q8N4L2 257 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 CITED4Q96RK1 184 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 GGACTQ9BVM4 153 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 HIF1ANQ9NWT6 349 aa17.28■□□□□ 0.36
USP6NL-204ENST00000606752 PRSS46E5RG02 174 aa17.27■□□□□ 0.36
USP6NL-204ENST00000606752 NBR2O15453 112 aa17.27■□□□□ 0.36
USP6NL-204ENST00000606752 GATA3P23771 443 aa17.27■□□□□ 0.36
USP6NL-204ENST00000606752 SNCAP37840 140 aa17.27■□□□□ 0.36
USP6NL-204ENST00000606752 LOXL1Q08397 574 aaPredicted RBP17.27■□□□□ 0.36
USP6NL-204ENST00000606752 BSXQ3C1V8 233 aa17.27■□□□□ 0.36
USP6NL-204ENST00000606752 C7orf69Q9H7B7 122 aa17.27■□□□□ 0.36
USP6NL-204ENST00000606752 RFNGQ9Y644 331 aa17.27■□□□□ 0.36
USP6NL-204ENST00000606752 NAV2Q8IVL1 2488 aa17.27■□□□□ 0.35
USP6NL-204ENST00000606752 ABCA12Q86UK0 2595 aa17.27■□□□□ 0.35
USP6NL-204ENST00000606752 IGHV1-69DA0A0B4J2H0 117 aa17.26■□□□□ 0.35
USP6NL-204ENST00000606752 UBE2L5PA0A1B0GUS4 154 aa17.26■□□□□ 0.35
USP6NL-204ENST00000606752 IGHV1-69P01742 117 aa17.26■□□□□ 0.35
USP6NL-204ENST00000606752 S100A1P23297 94 aa17.26■□□□□ 0.35
USP6NL-204ENST00000606752 BLOC1S1P78537 153 aa17.26■□□□□ 0.35
USP6NL-204ENST00000606752 TMEM182Q6ZP80 229 aaPredicted RBP17.26■□□□□ 0.35
USP6NL-204ENST00000606752 LINC01356Q8N9X3 169 aa17.26■□□□□ 0.35
USP6NL-204ENST00000606752 TAF15Q92804 592 aaKnown RBP eCLIP17.26■□□□□ 0.35
USP6NL-204ENST00000606752 KIAA1456Q9P272 454 aa17.26■□□□□ 0.35
USP6NL-204ENST00000606752 A0A1B0GW64 132 aa17.26■□□□□ 0.35
USP6NL-204ENST00000606752 UMAD1C9J7I0 102 aa17.26■□□□□ 0.35
USP6NL-204ENST00000606752 NDUFA3O95167 84 aa17.26■□□□□ 0.35
USP6NL-204ENST00000606752 PLGLAQ15195 96 aa17.26■□□□□ 0.35
USP6NL-204ENST00000606752 TNXAQ16473 311 aa17.26■□□□□ 0.35
USP6NL-204ENST00000606752 C2orf83Q53S99 150 aa17.26■□□□□ 0.35
USP6NL-204ENST00000606752 Q5PR19 223 aa17.26■□□□□ 0.35
USP6NL-204ENST00000606752 PRSS57Q6UWY2 283 aa17.26■□□□□ 0.35
USP6NL-204ENST00000606752 RNASE2P10153 161 aaKnown RBP17.25■□□□□ 0.35
USP6NL-204ENST00000606752 BRS3P32247 399 aa17.25■□□□□ 0.35
USP6NL-204ENST00000606752 RPL27AP46776 148 aaKnown RBP17.25■□□□□ 0.35
USP6NL-204ENST00000606752 COMPP49747 757 aaPredicted RBP17.25■□□□□ 0.35
USP6NL-204ENST00000606752 DLK1P80370 383 aa17.25■□□□□ 0.35
USP6NL-204ENST00000606752 PSMG3Q9BT73 122 aaPredicted RBP17.25■□□□□ 0.35
USP6NL-204ENST00000606752 RSG1Q9BU20 258 aa17.25■□□□□ 0.35
USP6NL-204ENST00000606752 TRIM77I1YAP6 450 aa17.24■□□□□ 0.35
USP6NL-204ENST00000606752 FAM106CPP0CH98 169 aa17.24■□□□□ 0.35
USP6NL-204ENST00000606752 WT1-ASQ06250 92 aa17.24■□□□□ 0.35
USP6NL-204ENST00000606752 Q8N6K4 173 aa17.24■□□□□ 0.35
USP6NL-204ENST00000606752 REG4Q9BYZ8 158 aa17.24■□□□□ 0.35
USP6NL-204ENST00000606752 PARP11Q9NR21 331 aa17.24■□□□□ 0.35
USP6NL-204ENST00000606752 VPS13CQ709C8 3753 aa17.24■□□□□ 0.35
USP6NL-204ENST00000606752 TRAV40A0A0B4J280 105 aa17.24■□□□□ 0.35
USP6NL-204ENST00000606752 RNF223E7ERA6 249 aa17.24■□□□□ 0.35
USP6NL-204ENST00000606752 FCN1O00602 326 aa17.24■□□□□ 0.35
USP6NL-204ENST00000606752 PRH1P02810 166 aa17.24■□□□□ 0.35
USP6NL-204ENST00000606752 MDKP21741 143 aaPredicted RBP17.24■□□□□ 0.35
USP6NL-204ENST00000606752 TUSC1Q2TAM9 212 aa17.24■□□□□ 0.35
USP6NL-204ENST00000606752 PXDC1Q5TGL8 231 aa17.24■□□□□ 0.35
USP6NL-204ENST00000606752 MRPL41Q8IXM3 137 aaKnown RBP17.24■□□□□ 0.35
USP6NL-204ENST00000606752 CSMD2Q7Z408 3487 aa17.23■□□□□ 0.35
USP6NL-204ENST00000606752 OR13C7P0DN81 318 aa17.23■□□□□ 0.35
USP6NL-204ENST00000606752 FGF7P21781 194 aa17.23■□□□□ 0.35
USP6NL-204ENST00000606752 GNB1P62873 340 aa17.23■□□□□ 0.35
USP6NL-204ENST00000606752 FBLN7Q53RD9 439 aa17.23■□□□□ 0.35
USP6NL-204ENST00000606752 Q6ZRG5 221 aa17.23■□□□□ 0.35
USP6NL-204ENST00000606752 CENPVQ7Z7K6 275 aaPredicted RBP17.23■□□□□ 0.35
USP6NL-204ENST00000606752 FBXO7Q9Y3I1 522 aa17.23■□□□□ 0.35
USP6NL-204ENST00000606752 TEX46H3BTG2 121 aa17.22■□□□□ 0.35
USP6NL-204ENST00000606752 TMEM11P17152 192 aa17.22■□□□□ 0.35
USP6NL-204ENST00000606752 CAMLGP49069 296 aa17.22■□□□□ 0.35
USP6NL-204ENST00000606752 SERF2P84101 59 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms