RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 REG1AP05451 166 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 TRAPPC2P0DI81 140 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 TRAPPC2BP0DI82 140 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 DEFA4P12838 97 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 RPA2P15927 270 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 SPNP16150 400 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 CD69Q07108 199 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 IL18Q14116 193 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 GDPD1Q8N9F7 314 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 TERB2Q8NHR7 220 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 SEC22AQ96IW7 307 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 CXorf58Q96LI9 332 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 CCDC140Q96MF4 163 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 C6orf62Q9GZU0 229 aaPredicted RBP13.12□□□□□ -0.31
HERC3-214ENST00000601319 NDUFA4L2Q9NRX3 87 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 TMEM14BQ9NUH8 114 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 FKBP11Q9NYL4 201 aa13.12□□□□□ -0.31
HERC3-214ENST00000601319 C15orf61A6NNL5 157 aa13.11□□□□□ -0.31
HERC3-214ENST00000601319 CYB5BO43169 146 aa13.11□□□□□ -0.31
HERC3-214ENST00000601319 GSTZ1O43708 216 aaPredicted RBP13.11□□□□□ -0.31
HERC3-214ENST00000601319 NDUFB8O95169 186 aa13.11□□□□□ -0.31
HERC3-214ENST00000601319 LY86O95711 162 aa13.11□□□□□ -0.31
HERC3-214ENST00000601319 GP9P14770 177 aa13.11□□□□□ -0.31
HERC3-214ENST00000601319 PGAM2P15259 253 aa13.11□□□□□ -0.31
HERC3-214ENST00000601319 PPP5CP53041 499 aa13.11□□□□□ -0.31
HERC3-214ENST00000601319 PIGPP57054 158 aa13.11□□□□□ -0.31
HERC3-214ENST00000601319 WT1-ASQ06250 92 aa13.11□□□□□ -0.31
HERC3-214ENST00000601319 LSM10Q969L4 123 aaKnown RBP13.11□□□□□ -0.31
HERC3-214ENST00000601319 EEF1AKMT3Q96AZ1 226 aa13.11□□□□□ -0.31
HERC3-214ENST00000601319 THYN1Q9P016 225 aa13.11□□□□□ -0.31
HERC3-214ENST00000601319 PEMTQ9UBM1 199 aa13.11□□□□□ -0.31
HERC3-214ENST00000601319 RSL24D1Q9UHA3 163 aaKnown RBP13.11□□□□□ -0.31
HERC3-214ENST00000601319 DNAH9Q9NYC9 4486 aa13.11□□□□□ -0.31
HERC3-214ENST00000601319 TRBV7-1A0A0A6YYK4 115 aa13.1□□□□□ -0.31
HERC3-214ENST00000601319 GGCTO75223 188 aaKnown RBP13.1□□□□□ -0.31
HERC3-214ENST00000601319 IGKV1-39P01597 117 aa13.1□□□□□ -0.31
HERC3-214ENST00000601319 IGKV1D-39P04432 117 aa13.1□□□□□ -0.31
HERC3-214ENST00000601319 SERPINE2P07093 398 aa13.1□□□□□ -0.31
HERC3-214ENST00000601319 CCDC71LQ8N9Z2 235 aa13.1□□□□□ -0.31
HERC3-214ENST00000601319 OR10W1Q8NGF6 305 aa13.1□□□□□ -0.31
HERC3-214ENST00000601319 MCFD2Q8NI22 146 aa13.1□□□□□ -0.31
HERC3-214ENST00000601319 ZFAND1Q8TCF1 268 aa13.1□□□□□ -0.31
HERC3-214ENST00000601319 MRGPRFQ96AM1 343 aa13.1□□□□□ -0.31
HERC3-214ENST00000601319 RBM38Q9H0Z9 239 aaKnown RBP13.1□□□□□ -0.31
HERC3-214ENST00000601319 OR51B2Q9Y5P1 312 aa13.1□□□□□ -0.31
HERC3-214ENST00000601319 B3GALNT1O75752 331 aa13.09□□□□□ -0.31
HERC3-214ENST00000601319 CSN3P07498 182 aa13.09□□□□□ -0.31
HERC3-214ENST00000601319 AKAIN1P0CW23 69 aa13.09□□□□□ -0.31
HERC3-214ENST00000601319 PI3P19957 117 aa13.09□□□□□ -0.31
HERC3-214ENST00000601319 SURF2Q15527 256 aaPredicted RBP13.09□□□□□ -0.31
HERC3-214ENST00000601319 SCGB2B2Q4G0G5 96 aa13.09□□□□□ -0.31
HERC3-214ENST00000601319 H2BFWTQ7Z2G1 175 aa13.09□□□□□ -0.31
HERC3-214ENST00000601319 OR13C8Q8NGS7 320 aa13.09□□□□□ -0.31
HERC3-214ENST00000601319 TMEM56Q96MV1 263 aa13.09□□□□□ -0.31
HERC3-214ENST00000601319 SOSTQ9BQB4 213 aa13.09□□□□□ -0.31
HERC3-214ENST00000601319 NSG2Q9Y328 171 aa13.09□□□□□ -0.31
HERC3-214ENST00000601319 SMAD5-AS1Q9Y6J3 95 aa13.09□□□□□ -0.31
HERC3-214ENST00000601319 STAB2Q8WWQ8 2551 aa13.09□□□□□ -0.31
HERC3-214ENST00000601319 MFSD2BA6NFX1 497 aa13.08□□□□□ -0.32
HERC3-214ENST00000601319 PPP5D1E7EU14 171 aa13.08□□□□□ -0.32
HERC3-214ENST00000601319 ZNF701M0R085 212 aaPredicted RBP13.08□□□□□ -0.32
HERC3-214ENST00000601319 LGALS9O00182 355 aa13.08□□□□□ -0.32
HERC3-214ENST00000601319 CTSDP07339 412 aaPredicted RBP13.08□□□□□ -0.32
HERC3-214ENST00000601319 OR13C7P0DN81 318 aa13.08□□□□□ -0.32
HERC3-214ENST00000601319 TNFSF8P32971 234 aa13.08□□□□□ -0.32
HERC3-214ENST00000601319 ARL3P36405 182 aa13.08□□□□□ -0.32
HERC3-214ENST00000601319 CLEC19AQ6UXS0 136 aa13.08□□□□□ -0.32
HERC3-214ENST00000601319 OR4C16Q8NGL9 310 aa13.08□□□□□ -0.32
HERC3-214ENST00000601319 VN1R17PQ8TDU5 208 aa13.08□□□□□ -0.32
HERC3-214ENST00000601319 TP53RKQ96S44 253 aa13.08□□□□□ -0.32
HERC3-214ENST00000601319 ATP6V0BQ99437 205 aa13.08□□□□□ -0.32
HERC3-214ENST00000601319 SLC2A8Q9NY64 477 aa13.08□□□□□ -0.32
HERC3-214ENST00000601319 COPZ2Q9P299 210 aa13.08□□□□□ -0.32
HERC3-214ENST00000601319 F11RQ9Y624 299 aaKnown RBP13.08□□□□□ -0.32
HERC3-214ENST00000601319 C3orf85A0A1B0GTC6 90 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 ANKRD20A5PA0PJZ0 165 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 DBX1A6NMT0 343 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 A8MWP6 167 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 DISC1C4P0D8 188 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 ATG12O94817 140 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 P0C879 139 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 NHLRC4P0CG21 123 aaPredicted RBP13.07□□□□□ -0.32
HERC3-214ENST00000601319 MECP2P51608 486 aaKnown RBP13.07□□□□□ -0.32
HERC3-214ENST00000601319 LCN12Q6JVE5 192 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 FAAP20Q6NZ36 180 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 HAPLN4Q86UW8 402 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 GPHB5Q86YW7 130 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 OR1L6Q8NGR2 347 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 OR2K2Q8NGT1 345 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 ZNF502Q8TBZ5 544 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 MARCH1Q8TCQ1 289 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 PRRT1Q99946 306 aa13.07□□□□□ -0.32
HERC3-214ENST00000601319 TENM3Q9P273 2699 aa13.06□□□□□ -0.32
HERC3-214ENST00000601319 IGKV1-5P01602 117 aa13.06□□□□□ -0.32
HERC3-214ENST00000601319 UCP1P25874 307 aa13.06□□□□□ -0.32
HERC3-214ENST00000601319 PRCDQ00LT1 54 aa13.06□□□□□ -0.32
HERC3-214ENST00000601319 Q8N402 240 aa13.06□□□□□ -0.32
HERC3-214ENST00000601319 OR4A16Q8NH70 328 aa13.06□□□□□ -0.32
HERC3-214ENST00000601319 HINT2Q9BX68 163 aa13.06□□□□□ -0.32
HERC3-214ENST00000601319 S4R3C0 116 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms