RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 HKR1P10072 659 aa17.53■□□□□ 0.4
SNRNP70-209ENST00000601065 RPL12P30050 165 aaKnown RBP17.53■□□□□ 0.4
SNRNP70-209ENST00000601065 CAV2P51636 162 aa17.53■□□□□ 0.4
SNRNP70-209ENST00000601065 ZNF345Q14585 488 aa17.53■□□□□ 0.4
SNRNP70-209ENST00000601065 TMUB2Q71RG4 321 aa17.53■□□□□ 0.4
SNRNP70-209ENST00000601065 C5orf56Q8N8D9 126 aa17.53■□□□□ 0.4
SNRNP70-209ENST00000601065 AQP10Q96PS8 301 aa17.53■□□□□ 0.4
SNRNP70-209ENST00000601065 ARL6Q9H0F7 186 aa17.53■□□□□ 0.4
SNRNP70-209ENST00000601065 VPREB3Q9UKI3 123 aa17.53■□□□□ 0.4
SNRNP70-209ENST00000601065 ZNF257Q9Y2Q1 563 aa17.53■□□□□ 0.4
SNRNP70-209ENST00000601065 A0A0D9SG52 128 aa17.52■□□□□ 0.4
SNRNP70-209ENST00000601065 FGF16O43320 207 aa17.52■□□□□ 0.4
SNRNP70-209ENST00000601065 OPN1MWP04001 364 aa17.52■□□□□ 0.4
SNRNP70-209ENST00000601065 OPN1MW2P0DN77 364 aa17.52■□□□□ 0.4
SNRNP70-209ENST00000601065 OPN1MW3P0DN78 364 aa17.52■□□□□ 0.4
SNRNP70-209ENST00000601065 HSPE1P61604 102 aaKnown RBP17.52■□□□□ 0.4
SNRNP70-209ENST00000601065 PDLIM3Q53GG5 364 aaPredicted RBP17.52■□□□□ 0.4
SNRNP70-209ENST00000601065 C16orf82Q7Z2V1 217 aa17.52■□□□□ 0.4
SNRNP70-209ENST00000601065 OR2C3Q8N628 320 aa17.52■□□□□ 0.4
SNRNP70-209ENST00000601065 DTD1Q8TEA8 209 aa17.52■□□□□ 0.4
SNRNP70-209ENST00000601065 COMMD5Q9GZQ3 224 aa17.52■□□□□ 0.4
SNRNP70-209ENST00000601065 ZC4H2Q9NQZ6 224 aa17.52■□□□□ 0.4
SNRNP70-209ENST00000601065 TNFRSF19Q9NS68 423 aa17.52■□□□□ 0.4
SNRNP70-209ENST00000601065 CACFD1Q9UGQ2 172 aa17.52■□□□□ 0.4
SNRNP70-209ENST00000601065 FAM24AA6NFZ4 105 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 H3BP45 60 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 CA2P00918 260 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 S100A11P31949 105 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 MAS1LP35410 378 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 SSBP2P81877 361 aaPredicted RBP17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 RBMS3Q6XE24 437 aaKnown RBP17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 KCNRGQ8N5I3 272 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 OR5B3Q8NH48 314 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 RASL11BQ9BPW5 248 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 LYRM2Q9NU23 88 aaPredicted RBP17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 PSENENQ9NZ42 101 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 WSB1Q9Y6I7 421 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 TEX50A0A1B0GTY4 177 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 TSC22D2O75157 780 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 ACTL6BO94805 426 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 AMY1AP04745 511 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 RPL23AP62750 156 aaKnown RBP17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 TNXAQ16473 311 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 C10orf55Q5SWW7 151 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 SMIM8Q96KF7 97 aa17.51■□□□□ 0.39
SNRNP70-209ENST00000601065 E7EUB6 86 aa17.5■□□□□ 0.39
SNRNP70-209ENST00000601065 GPR137BO60478 399 aa17.5■□□□□ 0.39
SNRNP70-209ENST00000601065 HLA-DRB1P01911 266 aa17.5■□□□□ 0.39
SNRNP70-209ENST00000601065 COMPP49747 757 aaPredicted RBP17.5■□□□□ 0.39
SNRNP70-209ENST00000601065 GNB1P62873 340 aa17.5■□□□□ 0.39
SNRNP70-209ENST00000601065 HINT2Q9BX68 163 aa17.5■□□□□ 0.39
SNRNP70-209ENST00000601065 M0QZK8 103 aa17.49■□□□□ 0.39
SNRNP70-209ENST00000601065 OPCMLQ14982 345 aa17.49■□□□□ 0.39
SNRNP70-209ENST00000601065 TMEM86BQ8N661 226 aa17.49■□□□□ 0.39
SNRNP70-209ENST00000601065 OR1L8Q8NGR8 309 aa17.49■□□□□ 0.39
SNRNP70-209ENST00000601065 CIB3Q96Q77 187 aaPredicted RBP17.49■□□□□ 0.39
SNRNP70-209ENST00000601065 NDUFA4L2Q9NRX3 87 aa17.49■□□□□ 0.39
SNRNP70-209ENST00000601065 FN1P02751 2386 aaKnown RBP17.48■□□□□ 0.39
SNRNP70-209ENST00000601065 IGSF23A1L1A6 192 aa17.48■□□□□ 0.39
SNRNP70-209ENST00000601065 C4BPBP20851 252 aa17.48■□□□□ 0.39
SNRNP70-209ENST00000601065 HOXA1P49639 335 aaPredicted RBP17.48■□□□□ 0.39
SNRNP70-209ENST00000601065 TAS2R30P59541 319 aa17.48■□□□□ 0.39
SNRNP70-209ENST00000601065 PRCDQ00LT1 54 aa17.48■□□□□ 0.39
SNRNP70-209ENST00000601065 SPANXN5Q5MJ07 72 aa17.48■□□□□ 0.39
SNRNP70-209ENST00000601065 ZNF562Q6V9R5 426 aa17.48■□□□□ 0.39
SNRNP70-209ENST00000601065 TMEM252Q8N6L7 170 aa17.48■□□□□ 0.39
SNRNP70-209ENST00000601065 CGB1A6NKQ9 187 aa17.48■□□□□ 0.39
SNRNP70-209ENST00000601065 CX3CL1P78423 397 aa17.48■□□□□ 0.39
SNRNP70-209ENST00000601065 NHLH2Q02577 135 aa17.48■□□□□ 0.39
SNRNP70-209ENST00000601065 SLC25A31Q9H0C2 315 aa17.48■□□□□ 0.39
SNRNP70-209ENST00000601065 IGHV7-81A0A0B4J1V7 117 aa17.47■□□□□ 0.39
SNRNP70-209ENST00000601065 A0A1B0GW64 132 aa17.47■□□□□ 0.39
SNRNP70-209ENST00000601065 CNIH1O95406 144 aa17.47■□□□□ 0.39
SNRNP70-209ENST00000601065 RPL27AP46776 148 aaKnown RBP17.47■□□□□ 0.39
SNRNP70-209ENST00000601065 EWSR1Q01844 656 aaKnown RBP eCLIP17.47■□□□□ 0.393e-24■■□□□ 13
SNRNP70-209ENST00000601065 SRSF12Q8WXF0 261 aaKnown RBP17.47■□□□□ 0.39
SNRNP70-209ENST00000601065 DUX5Q96PT3 197 aa17.47■□□□□ 0.39
SNRNP70-209ENST00000601065 HSPB9Q9BQS6 159 aa17.47■□□□□ 0.39
SNRNP70-209ENST00000601065 HEYLQ9NQ87 328 aaPredicted RBP17.47■□□□□ 0.39
SNRNP70-209ENST00000601065 SH2D7A6NKC9 451 aaPredicted RBP17.46■□□□□ 0.39
SNRNP70-209ENST00000601065 VDAC2P45880 294 aaPredicted RBP17.46■□□□□ 0.39
SNRNP70-209ENST00000601065 FXYD3Q14802 87 aa17.46■□□□□ 0.39
SNRNP70-209ENST00000601065 BSCL2Q96G97 398 aaPredicted RBP17.46■□□□□ 0.39
SNRNP70-209ENST00000601065 HIPK2Q9H2X6 1198 aa17.46■□□□□ 0.39
SNRNP70-209ENST00000601065 ENY2Q9NPA8 101 aa17.46■□□□□ 0.39
SNRNP70-209ENST00000601065 KANTRA0A1W2PQU2 76 aa17.45■□□□□ 0.38
SNRNP70-209ENST00000601065 DNAJC9-AS1A6NH13 148 aa17.45■□□□□ 0.38
SNRNP70-209ENST00000601065 CST7O76096 145 aa17.45■□□□□ 0.38
SNRNP70-209ENST00000601065 NDPQ00604 133 aa17.45■□□□□ 0.38
SNRNP70-209ENST00000601065 TMEM267Q0VDI3 215 aaPredicted RBP17.45■□□□□ 0.38
SNRNP70-209ENST00000601065 PLEKHA3Q9HB20 300 aa17.45■□□□□ 0.38
SNRNP70-209ENST00000601065 ESM1Q9NQ30 184 aa17.45■□□□□ 0.38
SNRNP70-209ENST00000601065 BCL2L11O43521 198 aa17.45■□□□□ 0.38
SNRNP70-209ENST00000601065 CRLF1O75462 422 aa17.45■□□□□ 0.38
SNRNP70-209ENST00000601065 FAM157CP0CG43 387 aa17.45■□□□□ 0.38
SNRNP70-209ENST00000601065 OR10W1Q8NGF6 305 aa17.45■□□□□ 0.38
SNRNP70-209ENST00000601065 ZNF418Q8TF45 676 aaPredicted RBP17.45■□□□□ 0.38
SNRNP70-209ENST00000601065 ARPC5LQ9BPX5 153 aa17.45■□□□□ 0.38
SNRNP70-209ENST00000601065 SMIM3Q9BZL3 60 aa17.45■□□□□ 0.38
SNRNP70-209ENST00000601065 PAIP2BQ9ULR5 123 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms