RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 NKX2-1P43699 371 aaPredicted RBP16.11■□□□□ 0.17
PNKP-215ENST00000600910 VDAC2P45880 294 aaPredicted RBP16.11■□□□□ 0.17
PNKP-215ENST00000600910 PDLIM3Q53GG5 364 aaPredicted RBP16.11■□□□□ 0.17
PNKP-215ENST00000600910 LFNGQ8NES3 379 aa16.11■□□□□ 0.17
PNKP-215ENST00000600910 WDR89Q96FK6 387 aaPredicted RBP16.11■□□□□ 0.17
PNKP-215ENST00000600910 CACFD1Q9UGQ2 172 aa16.11■□□□□ 0.17
PNKP-215ENST00000600910 FAM90A26D6RGX4 464 aa16.1■□□□□ 0.17
PNKP-215ENST00000600910 ID3Q02535 119 aa16.1■□□□□ 0.17
PNKP-215ENST00000600910 ECSCRQ19T08 205 aa16.1■□□□□ 0.17
PNKP-215ENST00000600910 NMES1Q9C002 83 aa16.1■□□□□ 0.17
PNKP-215ENST00000600910 WSB1Q9Y6I7 421 aa16.1■□□□□ 0.17
PNKP-215ENST00000600910 C2CD3Q4AC94 2353 aa16.09■□□□□ 0.17
PNKP-215ENST00000600910 CEBPZOSA8MTT3 80 aa16.09■□□□□ 0.17
PNKP-215ENST00000600910 G3V318 75 aa16.09■□□□□ 0.17
PNKP-215ENST00000600910 NDUFA7O95182 113 aa16.09■□□□□ 0.17
PNKP-215ENST00000600910 CRIP2P52943 208 aaPredicted RBP16.09■□□□□ 0.17
PNKP-215ENST00000600910 IL15RAQ13261 267 aa16.09■□□□□ 0.17
PNKP-215ENST00000600910 ASPHD1Q5U4P2 390 aa16.09■□□□□ 0.17
PNKP-215ENST00000600910 ZNF436Q9C0F3 470 aaPredicted RBP16.09■□□□□ 0.17
PNKP-215ENST00000600910 MAGT1Q9H0U3 335 aa16.09■□□□□ 0.17
PNKP-215ENST00000600910 RBKSQ9H477 322 aa16.09■□□□□ 0.17
PNKP-215ENST00000600910 C16orf95Q9H693 158 aa16.09■□□□□ 0.17
PNKP-215ENST00000600910 PLEKHA3Q9HB20 300 aa16.09■□□□□ 0.17
PNKP-215ENST00000600910 SERTAD4Q9NUC0 356 aa16.09■□□□□ 0.17
PNKP-215ENST00000600910 TRAV41A0A0B4J266 112 aa16.08■□□□□ 0.17
PNKP-215ENST00000600910 IGLC7A0M8Q6 106 aa16.08■□□□□ 0.17
PNKP-215ENST00000600910 MBPP02686 304 aaPredicted RBP16.08■□□□□ 0.17
PNKP-215ENST00000600910 AREGP15514 252 aa16.08■□□□□ 0.17
PNKP-215ENST00000600910 HOXA1P49639 335 aaPredicted RBP16.08■□□□□ 0.17
PNKP-215ENST00000600910 CYCSP99999 105 aaKnown RBP16.08■□□□□ 0.17
PNKP-215ENST00000600910 TMEM267Q0VDI3 215 aaPredicted RBP16.08■□□□□ 0.17
PNKP-215ENST00000600910 UNQ5815/PRO19632Q6UWF5 114 aa16.08■□□□□ 0.17
PNKP-215ENST00000600910 STPG2Q8N412 459 aa16.08■□□□□ 0.17
PNKP-215ENST00000600910 A0A1W2PN81 502 aa16.08■□□□□ 0.16
PNKP-215ENST00000600910 CHRNA7P36544 502 aa16.08■□□□□ 0.16
PNKP-215ENST00000600910 POLR2GP62487 172 aaKnown RBP eCLIP16.08■□□□□ 0.16
PNKP-215ENST00000600910 WT1-ASQ06250 92 aa16.08■□□□□ 0.16
PNKP-215ENST00000600910 SRSF4Q08170 494 aaKnown RBP16.08■□□□□ 0.16
PNKP-215ENST00000600910 AKIRIN2Q53H80 203 aa16.08■□□□□ 0.16
PNKP-215ENST00000600910 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.08■□□□□ 0.16
PNKP-215ENST00000600910 LINC01006Q8NI28 216 aa16.08■□□□□ 0.16
PNKP-215ENST00000600910 CHAC2Q8WUX2 184 aa16.08■□□□□ 0.16
PNKP-215ENST00000600910 SRSF8Q9BRL6 282 aaKnown RBP16.08■□□□□ 0.16
PNKP-215ENST00000600910 ENY2Q9NPA8 101 aa16.08■□□□□ 0.16
PNKP-215ENST00000600910 SYNGR2O43760 224 aa16.07■□□□□ 0.16
PNKP-215ENST00000600910 MED6O75586 246 aa16.07■□□□□ 0.16
PNKP-215ENST00000600910 REG1AP05451 166 aa16.07■□□□□ 0.16
PNKP-215ENST00000600910 OR13C7P0DN81 318 aa16.07■□□□□ 0.16
PNKP-215ENST00000600910 RAB32Q13637 225 aa16.07■□□□□ 0.16
PNKP-215ENST00000600910 C11orf87Q6NUJ2 197 aa16.07■□□□□ 0.16
PNKP-215ENST00000600910 OR4F5Q8NH21 305 aa16.07■□□□□ 0.16
PNKP-215ENST00000600910 DTD1Q8TEA8 209 aa16.07■□□□□ 0.16
PNKP-215ENST00000600910 ZNF580Q9UK33 172 aa16.07■□□□□ 0.16
PNKP-215ENST00000600910 WRBO00258 174 aa16.06■□□□□ 0.16
PNKP-215ENST00000600910 HKR1P10072 659 aa16.06■□□□□ 0.16
PNKP-215ENST00000600910 BCAP31P51572 246 aa16.06■□□□□ 0.16
PNKP-215ENST00000600910 S100A10P60903 97 aa16.06■□□□□ 0.16
PNKP-215ENST00000600910 LRRC37A5PQ49AS3 106 aa16.06■□□□□ 0.16
PNKP-215ENST00000600910 C19orf54Q5BKX5 351 aa16.06■□□□□ 0.16
PNKP-215ENST00000600910 HSD17B13Q7Z5P4 300 aaPredicted RBP16.06■□□□□ 0.16
PNKP-215ENST00000600910 TMEM68Q96MH6 324 aa16.06■□□□□ 0.16
PNKP-215ENST00000600910 LSM5Q9Y4Y9 91 aaKnown RBP16.06■□□□□ 0.16
PNKP-215ENST00000600910 K7EPK0 472 aa16.05■□□□□ 0.16
PNKP-215ENST00000600910 SSSCA1O60232 199 aa16.05■□□□□ 0.16
PNKP-215ENST00000600910 GIPP09681 153 aaPredicted RBP16.05■□□□□ 0.16
PNKP-215ENST00000600910 IAPPP10997 89 aa16.05■□□□□ 0.16
PNKP-215ENST00000600910 CD83Q01151 205 aa16.05■□□□□ 0.16
PNKP-215ENST00000600910 MRPL41Q8IXM3 137 aaKnown RBP16.05■□□□□ 0.16
PNKP-215ENST00000600910 OR5T1Q8NG75 326 aa16.05■□□□□ 0.16
PNKP-215ENST00000600910 PPP1R1CQ8WVI7 109 aa16.05■□□□□ 0.16
PNKP-215ENST00000600910 HEYLQ9NQ87 328 aaPredicted RBP16.05■□□□□ 0.16
PNKP-215ENST00000600910 RCL1Q9Y2P8 373 aaKnown RBP16.05■□□□□ 0.16
PNKP-215ENST00000600910 INS-IGF2F8WCM5 200 aa16.05■□□□□ 0.16
PNKP-215ENST00000600910 PSMB6P28072 239 aa16.05■□□□□ 0.16
PNKP-215ENST00000600910 ERHP84090 104 aaKnown RBP16.05■□□□□ 0.16
PNKP-215ENST00000600910 TTC9CQ8N5M4 171 aa16.05■□□□□ 0.16
PNKP-215ENST00000600910 GON7Q9BXV9 100 aa16.05■□□□□ 0.16
PNKP-215ENST00000600910 HIPK2Q9H2X6 1198 aa16.05■□□□□ 0.16
PNKP-215ENST00000600910 NPIPB5A8MRT5 1133 aa16.04■□□□□ 0.16
PNKP-215ENST00000600910 CTRB1P17538 263 aa16.04■□□□□ 0.16
PNKP-215ENST00000600910 MDKP21741 143 aaPredicted RBP16.04■□□□□ 0.16
PNKP-215ENST00000600910 PPIFP30405 207 aaKnown RBP16.04■□□□□ 0.16
PNKP-215ENST00000600910 CFHR3Q02985 330 aa16.04■□□□□ 0.16
PNKP-215ENST00000600910 CTRB2Q6GPI1 263 aa16.04■□□□□ 0.16
PNKP-215ENST00000600910 C19orf35Q6ZS72 473 aa16.04■□□□□ 0.16
PNKP-215ENST00000600910 ZNF329Q86UD4 541 aa16.04■□□□□ 0.16
PNKP-215ENST00000600910 OR2C3Q8N628 320 aa16.04■□□□□ 0.16
PNKP-215ENST00000600910 ASB13Q8WXK3 278 aa16.04■□□□□ 0.16
PNKP-215ENST00000600910 WNT10AQ9GZT5 417 aa16.04■□□□□ 0.16
PNKP-215ENST00000600910 SOX15O60248 233 aa16.03■□□□□ 0.16
PNKP-215ENST00000600910 KRTAP24-1Q3LI83 254 aa16.03■□□□□ 0.16
PNKP-215ENST00000600910 FAM110DQ8TAY7 271 aaPredicted RBP16.03■□□□□ 0.16
PNKP-215ENST00000600910 ZFP57Q9NU63 452 aa16.03■□□□□ 0.16
PNKP-215ENST00000600910 CLPSL1A2RUU4 121 aa16.02■□□□□ 0.16
PNKP-215ENST00000600910 PSMB11A5LHX3 300 aa16.02■□□□□ 0.16
PNKP-215ENST00000600910 FBXO24O75426 580 aa16.02■□□□□ 0.16
PNKP-215ENST00000600910 CRYGCP07315 174 aa16.02■□□□□ 0.16
PNKP-215ENST00000600910 SNCAP37840 140 aa16.02■□□□□ 0.16
PNKP-215ENST00000600910 RAP2BP61225 183 aa16.02■□□□□ 0.16
PNKP-215ENST00000600910 C10orf99Q6UWK7 81 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms