RNA–Protein interactions for RNA: ENST00000600898.1

USF2-214, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 2

Gene USF2, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-214ENST00000600898 UBQLN2Q9UHD9 624 aa12.15□□□□□ -0.46
USF2-214ENST00000600898 RCL1Q9Y2P8 373 aaKnown RBP12.15□□□□□ -0.46
USF2-214ENST00000600898 HIVEP2P31629 2446 aa12.15□□□□□ -0.47
USF2-214ENST00000600898 FBN3Q75N90 2809 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 K7EPK0 472 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 EGR2P11161 476 aaPredicted RBP12.14□□□□□ -0.47
USF2-214ENST00000600898 SRD5A1P18405 259 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 HNF1AP20823 631 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 P2RY1P47900 373 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 BLCAPP62952 87 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 SRSF2Q01130 221 aaKnown RBP12.14□□□□□ -0.47
USF2-214ENST00000600898 ID3Q02535 119 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 THOC7Q6I9Y2 204 aaKnown RBP12.14□□□□□ -0.47
USF2-214ENST00000600898 C19orf35Q6ZS72 473 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 PPP1R27Q86WC6 154 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 FOXRED2Q8IWF2 684 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 OR10W1Q8NGF6 305 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 DCUN1D4Q92564 292 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 ARPC5LQ9BPX5 153 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 RBKSQ9H477 322 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.14□□□□□ -0.47
USF2-214ENST00000600898 OR5AC2Q9NZP5 309 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 FOXA2Q9Y261 457 aaPredicted RBP12.14□□□□□ -0.47
USF2-214ENST00000600898 OR51B2Q9Y5P1 312 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 POMT1Q9Y6A1 747 aa12.14□□□□□ -0.47
USF2-214ENST00000600898 IGHV7-81A0A0B4J1V7 117 aa12.13□□□□□ -0.47
USF2-214ENST00000600898 DNAJC9-AS1A6NH13 148 aa12.13□□□□□ -0.47
USF2-214ENST00000600898 FAM90A26D6RGX4 464 aa12.13□□□□□ -0.47
USF2-214ENST00000600898 SPDEFO95238 335 aa12.13□□□□□ -0.47
USF2-214ENST00000600898 LY86O95711 162 aa12.13□□□□□ -0.47
USF2-214ENST00000600898 APELAP0DMC3 54 aa12.13□□□□□ -0.47
USF2-214ENST00000600898 PVALBP20472 110 aaPredicted RBP12.13□□□□□ -0.47
USF2-214ENST00000600898 PAX9P55771 341 aa12.13□□□□□ -0.47
USF2-214ENST00000600898 GNB1P62873 340 aa12.13□□□□□ -0.47
USF2-214ENST00000600898 RPL8P62917 257 aaKnown RBP12.13□□□□□ -0.47
USF2-214ENST00000600898 CLLU1Q5K131 121 aa12.13□□□□□ -0.47
USF2-214ENST00000600898 OR4A16Q8NH70 328 aa12.13□□□□□ -0.47
USF2-214ENST00000600898 SCARB1Q8WTV0 552 aa12.13□□□□□ -0.47
USF2-214ENST00000600898 FAM103A1Q9BTL3 118 aaKnown RBP12.13□□□□□ -0.47
USF2-214ENST00000600898 HSPB7Q9UBY9 170 aa12.13□□□□□ -0.47
USF2-214ENST00000600898 MOB4Q9Y3A3 225 aa12.13□□□□□ -0.47
USF2-214ENST00000600898 LSM5Q9Y4Y9 91 aaKnown RBP12.13□□□□□ -0.47
USF2-214ENST00000600898 TSC22D2O75157 780 aa12.12□□□□□ -0.47
USF2-214ENST00000600898 IAPPP10997 89 aa12.12□□□□□ -0.47
USF2-214ENST00000600898 RAB14P61106 215 aa12.12□□□□□ -0.47
USF2-214ENST00000600898 CX3CL1P78423 397 aa12.12□□□□□ -0.47
USF2-214ENST00000600898 TNFRSF9Q07011 255 aa12.12□□□□□ -0.47
USF2-214ENST00000600898 PLGLAQ15195 96 aa12.12□□□□□ -0.47
USF2-214ENST00000600898 TNXAQ16473 311 aa12.12□□□□□ -0.47
USF2-214ENST00000600898 TEX29Q8N6K0 151 aa12.12□□□□□ -0.47
USF2-214ENST00000600898 OR4A5Q8NH83 315 aa12.12□□□□□ -0.47
USF2-214ENST00000600898 SSMEM1Q8WWF3 244 aa12.12□□□□□ -0.47
USF2-214ENST00000600898 CDC42EP3Q9UKI2 254 aa12.12□□□□□ -0.47
USF2-214ENST00000600898 VPREB3Q9UKI3 123 aa12.12□□□□□ -0.47
USF2-214ENST00000600898 CUBNO60494 3623 aa12.11□□□□□ -0.47
USF2-214ENST00000600898 TEX22C9J3V5 150 aa12.11□□□□□ -0.47
USF2-214ENST00000600898 CRLF1O75462 422 aa12.11□□□□□ -0.47
USF2-214ENST00000600898 RBMXL2O75526 392 aaKnown RBP12.11□□□□□ -0.47
USF2-214ENST00000600898 NKX2-1P43699 371 aaPredicted RBP12.11□□□□□ -0.47
USF2-214ENST00000600898 VDAC2P45880 294 aaPredicted RBP12.11□□□□□ -0.47
USF2-214ENST00000600898 COMPP49747 757 aaPredicted RBP12.11□□□□□ -0.47
USF2-214ENST00000600898 S100A10P60903 97 aa12.11□□□□□ -0.47
USF2-214ENST00000600898 HSPE1P61604 102 aaKnown RBP12.11□□□□□ -0.47
USF2-214ENST00000600898 EXOSC2Q13868 293 aaKnown RBP12.11□□□□□ -0.47
USF2-214ENST00000600898 ASPHD1Q5U4P2 390 aa12.11□□□□□ -0.47
USF2-214ENST00000600898 ZNF429Q86V71 674 aa12.11□□□□□ -0.47
USF2-214ENST00000600898 PRIMA1Q86XR5 153 aa12.11□□□□□ -0.47
USF2-214ENST00000600898 LRRC20Q8TCA0 184 aa12.11□□□□□ -0.47
USF2-214ENST00000600898 MDFIQ99750 246 aa12.11□□□□□ -0.47
USF2-214ENST00000600898 HINT2Q9BX68 163 aa12.11□□□□□ -0.47
USF2-214ENST00000600898 NDUFA4L2Q9NRX3 87 aa12.11□□□□□ -0.47
USF2-214ENST00000600898 KIAA1456Q9P272 454 aa12.11□□□□□ -0.47
USF2-214ENST00000600898 PRNDQ9UKY0 176 aa12.11□□□□□ -0.47
USF2-214ENST00000600898 SSSCA1O60232 199 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 GPR137BO60478 399 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 HLA-DRB1P01911 266 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 HKR1P10072 659 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 AREGP15514 252 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 S100A1P23297 94 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 RPL12P30050 165 aaKnown RBP12.1□□□□□ -0.47
USF2-214ENST00000600898 TAS2R30P59541 319 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 FXYD3Q14802 87 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 TMEM95Q3KNT9 176 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 EIF5AL1Q6IS14 154 aaKnown RBP12.1□□□□□ -0.47
USF2-214ENST00000600898 MMD2Q8IY49 270 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 OR5R1Q8NH85 324 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 VSTM2AQ8TAG5 236 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 TMEM170AQ8WVE7 144 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 BSCL2Q96G97 398 aaPredicted RBP12.1□□□□□ -0.47
USF2-214ENST00000600898 RAB40CQ96S21 281 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 AIFM2Q9BRQ8 373 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 MED9Q9NWA0 146 aa12.1□□□□□ -0.47
USF2-214ENST00000600898 NSD1Q96L73 2696 aaPredicted RBP12.1□□□□□ -0.47
USF2-214ENST00000600898 IGLC7A0M8Q6 106 aa12.09□□□□□ -0.47
USF2-214ENST00000600898 LINC00862A6NCI5 91 aa12.09□□□□□ -0.47
USF2-214ENST00000600898 MSGN1A6NI15 193 aa12.09□□□□□ -0.47
USF2-214ENST00000600898 WRBO00258 174 aa12.09□□□□□ -0.47
USF2-214ENST00000600898 ATP6V1G1O75348 118 aa12.09□□□□□ -0.47
USF2-214ENST00000600898 JTBO76095 146 aa12.09□□□□□ -0.47
USF2-214ENST00000600898 IFNA17P01571 189 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms